schrodinger.protein.helix module

Module for converting residue sequences to 3D structures with an a-helix secondary structure.

Copyright Schrodinger, LLC. All rights reserved.

schrodinger.protein.helix.get_fragment_structure(fragname)

schrodinger.protein.helix.grow_fragment(st, fromatom, toatom, fraggroup, fragname, direction=None)

Grow the given fragment to the given ct, in alpha-helix configuration.

schrodinger.protein.helix.process_sequence(line)