schrodinger.utils.colorscheme module

class schrodinger.utils.colorscheme.ColorSchemeManager(*args, **kwargs)

Bases: object

applyRampToColorSchemeRules()

applyScheme()

applySchemeDescriptive()

copyColorScheme()

copyColorSchemeByObject()

copyColorSchemeRule()

deleteColorScheme()

deleteColorSchemeRules()

findColorSchemeByDescription()

findColorSchemeByName()

getCarbonColorSchemeByRGB()

getColorSchemeName()

getCurrentColorScheme()

getCurrentColorSchemeName()

getCurrentSchemeDescription()

getLigandColorSchemeByRGB()

getNeedRebuildColorSchemes()

getNumberOfColorSchemes()

getNumberOfSubColorSchemes()

getSubColorSchemeName()

getSubColorSchemeNamesList()

getSubColorSchemes()

getTotalSubColorSchemes()

static instance()

isColorSchemeChanged()

isSchemeNameInUse()

isStandardColorScheme()

isSubColorSchemeName()

newColorScheme()

newColorSchemeRule()

readColorSchemeFile()

renameColorScheme()

reorderColorSchemes()

resetAllColorSchemeRules()

resetColorSchemes()

restoreCurrentColorScheme()

saveCurrentColorScheme()

setColorSchemeChanged()

setColorSchemeRuleASL()

setColorSchemeRuleColor()

setColorSchemeRuleDescription()

setCurrentColorSchemeName()

setDefaultColorScheme()

setNeedRebuildColorSchemes()

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writeColorSchemeFile()

class schrodinger.utils.colorscheme.MM_CScheme(short_name, long_name, original_name)

Bases: object

addRule()

applyScheme()

clearRules()

deleteFile()

getDescription()

getFileName()

getLongName()

getOriginalName()

getRules()

getShortName()

readRulesFromFile()

setDescription()

setFileName()

setLongName()

setOriginalName()

setRules()

setShortName()

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writeFile()

class schrodinger.utils.colorscheme.MM_CSchemeRule(color_name, asl_spec, scheme_name, description)

Bases: object

applyRule()

getASL()

getColor()

getColorName()

getDescription()

setASL()

setColor()

setColorName()

setDescription()

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class schrodinger.utils.colorscheme.MM_Color(*args)

Bases: object

getName()

getRGBA()

set()

setName()

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class schrodinger.utils.colorscheme.MM_ColorRamp(short_name, long_name, file_name)

Bases: object

getColorIndices()

getFileName()

getLongName()

getNumColors()

getShortName()

readColorRampFile()

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class schrodinger.utils.colorscheme.MM_ColorRampHolder(*args, **kwargs)

Bases: object

getColorIndices()

getNumColors()

getNumRamps()

getRampNames()

static instance()

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class schrodinger.utils.colorscheme.MM_Colormap(size=256)

Bases: object

getIndex()

getName()

getRGBA()

getRange()

getSize()

isValidIndex()

set()

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class schrodinger.utils.colorscheme.MM_ColormapGL(*args, **kwargs)

Bases: schrodinger.utils.colorscheme.MM_Colormap

static getDefaultMap()

initColor()

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class schrodinger.utils.colorscheme.MMrange

Bases: object

begin

end

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class schrodinger.utils.colorscheme.SwigDoubleVector(*args)

Bases: object

append()

assign()

back()

begin()

capacity()

clear()

empty()

end()

erase()

front()

get_allocator()

insert()

iterator()

pop()

pop_back()

push_back()

rbegin()

rend()

reserve()

resize()

size()

swap()

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class schrodinger.utils.colorscheme.SwigDoubleVector3(*args)

Bases: object

append()

assign()

back()

begin()

capacity()

clear()

empty()

end()

erase()

front()

get_allocator()

insert()

iterator()

pop()

pop_back()

push_back()

rbegin()

rend()

reserve()

resize()

size()

swap()

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class schrodinger.utils.colorscheme.SwigIntIntPair(*args)

Bases: object

first

second

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class schrodinger.utils.colorscheme.SwigIntVector(*args)

Bases: object

append()

assign()

back()

begin()

capacity()

clear()

empty()

end()

erase()

front()

get_allocator()

insert()

iterator()

pop()

pop_back()

push_back()

rbegin()

rend()

reserve()

resize()

size()

swap()

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class schrodinger.utils.colorscheme.SwigPyIterator(*args, **kwargs)

Bases: object

advance()

copy()

decr()

distance()

equal()

incr()

next()

previous()

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value()

class schrodinger.utils.colorscheme.SwigStringVector(*args)

Bases: object

append()

assign()

back()

begin()

capacity()

clear()

empty()

end()

erase()

front()

get_allocator()

insert()

iterator()

pop()

pop_back()

push_back()

rbegin()

rend()

reserve()

resize()

size()

swap()

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class schrodinger.utils.colorscheme.SwigUInt64Vector(*args)

Bases: object

append()

assign()

back()

begin()

capacity()

clear()

empty()

end()

erase()

front()

get_allocator()

insert()

iterator()

pop()

pop_back()

push_back()

rbegin()

rend()

reserve()

resize()

size()

swap()

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class schrodinger.utils.colorscheme.SwigUnsignedIntVector(*args)

Bases: object

append()

assign()

back()

begin()

capacity()

clear()

empty()

end()

erase()

front()

get_allocator()

insert()

iterator()

pop()

pop_back()

push_back()

rbegin()

rend()

reserve()

resize()

size()

swap()

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class schrodinger.utils.colorscheme.SwigUnsignedIntVector2(*args)

Bases: object

append()

assign()

back()

begin()

capacity()

clear()

empty()

end()

erase()

front()

get_allocator()

insert()

iterator()

pop()

pop_back()

push_back()

rbegin()

rend()

reserve()

resize()

size()

swap()

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class schrodinger.utils.colorscheme.SwigVectorIntIntPair(*args)

Bases: object

append()

assign()

back()

begin()

capacity()

clear()

empty()

end()

erase()

front()

get_allocator()

insert()

iterator()

pop()

pop_back()

push_back()

rbegin()

rend()

reserve()

resize()

size()

swap()

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class schrodinger.utils.colorscheme.TemporaryOFStream

Bases: schrodinger.utils.colorscheme.ofstream

A subclass of ofstream that uses the tempfile module to get a temporary filename and automatically deletes itself at garbage collection.

class schrodinger.utils.colorscheme.ifstream(filename)

Bases: schrodinger.utils.colorscheme.istream

close()

is_open()

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class schrodinger.utils.colorscheme.istream(*args, **kwargs)

Bases: object

eof()

getline()

read()

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class schrodinger.utils.colorscheme.ofstream(filename)

Bases: schrodinger.utils.colorscheme.ostream

close()

is_open()

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class schrodinger.utils.colorscheme.ostream(*args, **kwargs)

Bases: object

flush()

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write()