Index

A

atoms properties

B

bonds properties

C

Canvas, [1] API changelog Suite 2007 Suite 2008 Suite 2009 Suite 2010 Suite 2011 Suite 2012 Suite 2013-1 Suite 2013-2 Suite 2013-3 Suite 2014-1 Suite 2014-2 Suite 2014-3 ChmAtom (class in schrodinger.application.canvas.base) ChmBitComparable (class in schrodinger.application.canvas.base) ChmBitset (class in schrodinger.application.canvas.base) ChmBond (class in schrodinger.application.canvas.base) ChmClusterGrouper (class in schrodinger.application.canvas.base) ChmCustomOut32 (class in schrodinger.application.canvas.base) ChmDendriticOut32 (class in schrodinger.application.canvas.base)

ChmFPIn32 (class in schrodinger.application.canvas.base) ChmFPMap32 (class in schrodinger.application.canvas.base) ChmFPOut32 (class in schrodinger.application.canvas.base) ChmHierarchicalClustering (class in schrodinger.application.canvas.base) ChmIterator (class in schrodinger.application.canvas.base) ChmLinearOut32 (class in schrodinger.application.canvas.base) ChmMatch (class in schrodinger.application.canvas.base) ChmMmctAdaptor (class in schrodinger.application.canvas.base) ChmMol (class in schrodinger.application.canvas.base) ChmMolprint2D32 (class in schrodinger.application.canvas.base) ChmPairwiseFPIn (class in schrodinger.application.canvas.base) ChmPairwiseFPOut32 (class in schrodinger.application.canvas.base) ChmPairwiseOut32 (class in schrodinger.application.canvas.base) ChmQuery (class in schrodinger.application.canvas.base) ChmQueryMatcher (class in schrodinger.application.canvas.base) ChmRadialOut32 (class in schrodinger.application.canvas.base) ChmSDReader (class in schrodinger.application.canvas.base) ChmSMARTSOut32 (class in schrodinger.application.canvas.base) ChmSmilesFileReader (class in schrodinger.application.canvas.base) ChmSparseBitset (class in schrodinger.application.canvas.base) ChmToplogicalTorsionOut32 (class in schrodinger.application.canvas.base) ChmTripletOut32 (class in schrodinger.application.canvas.base)

D

Desmond

E

environment variable PATH, [1] PYTHONPATH, [1], [2], [3], [4], [5], [6], [7] PYTHONSTARTUP PYTHONWARNINGS SCHRODINGER SCHRODINGER_PYTHONPATH, [1] SCHRODINGER_SCRIPTS, [1], [2]

G

Glide

I

installing modules

interactive prompt

J

Jaguar

job control jobdj

M

MacroModel Maestro callbacks commands project table, [1] running scripts script installation workspace, [1]

MCPRO minimization modules accessing your own installing

P

PATH, [1] Prime project table Maestro, [1]

PYTHONPATH, [1], [2], [3], [4], [5], [6], [7] PYTHONSTARTUP PYTHONWARNINGS

Q

QSite

R

readline module

S

SCHRODINGER schrodinger.application.canvas.base (module) SCHRODINGER_PYTHONPATH, [1] SCHRODINGER_SCRIPTS, [1], [2] structure adjustment creation i/o measurement minimization properties substructure searching

superimposition

V

virtualenv

VSW

W

workspace Maestro

workspace, Maestro