schrodinger.application.glide.gui module

Classes and functions that are shared between the Glide GridGen and Docking panels.

Copyright Schrodinger, LLC. All rights reserved.

schrodinger.application.glide.gui.find_equivalent_atoms(st, anum)

Given a structure atom, return a list of atoms that are identical to it. If no identical atoms are found, and empty list is returned.

class schrodinger.application.glide.gui.GlideWorkspaceMarkers

Bases: object

Class for marking constraints and excluded volumes in the Workspace. Along with the marker, optional labels are also drawn.

__init__()

Initialize self. See help(type(self)) for accurate signature.

clear()

Remove all added labels.

add(center=None, radius=None, atom=None, color=None, name=None, opacity=0.8)

Add another marker to draw.

Either center and radius need to be specified (to draw a sphere) or an atom object (to draw atom markers).

show()

Show the markers in the Workspace.

hide()

Hide the markers from the Workspace.

setVisible(visible)

Show the markers if “visible” is True, hide otherwise.

showLabels()

Enable labels.

hideLabels()

Disable labels.

setLabelsVisible(visible)

Show the labels if “visible” is True, hide otherwise.