schrodinger package¶
This is the top level package for all Schrodinger modules.
The main modules of interest are schrodinger.structure
and the ones in
the schrodinger.structutils
package.
The Python Module Overview included with the Schrodinger distribution gives an expository introduction to the Schrodinger Python API. It is available at https://www.schrodinger.com/pythonapi.
If you have questions about the API, please contact us at https://www.schrodinger.com/supportcenter.
-
schrodinger.
version_at_least
(v)[source]¶ Check that the Schrodinger python version is at least the value ‘v’. NOTE: Deprecated in favor of get_mmshare_version()
-
schrodinger.
version_at_most
(v)[source]¶ Check that the Schrodinger python version does not exceed ‘v’. NOTE: Deprecated in favor of get_mmshare_version()
-
schrodinger.
version_compatible
(minimum, maximum)[source]¶ Check that the version is between minimum and maximum values. NOTE: Deprecated in favor of get_mmshare_version()
If the current Schrodinger python version is less than the minimum, an Exception will be raised. If the current version is greater than the maximum, a warning will be issued.
Return the mmshare version as a 5 digit integer.
-
schrodinger.
get_maestro
()[source]¶ Get either schrodinger.maestro.maestro or an object that allows scripts to avoid running maestro dependent-code, and print reasonable errors if that code is run outside of maestro.
- Returns
schrodinger.maestro.maestro or _DummyMaestroModule
-
exception
schrodinger.
MaestroNotAvailableError
[source]¶ Bases:
ImportError
Error class to indicate that Maestro is not available and there was an attempt to use it.
-
__init__
(*args, **kwargs)¶ Initialize self. See help(type(self)) for accurate signature.
-
args
¶
-
msg
¶ exception message
-
name
¶ module name
-
path
¶ module path
-
with_traceback
()¶ Exception.with_traceback(tb) – set self.__traceback__ to tb and return self.
-
-
schrodinger.
get_mpl_backend_name
() → str[source]¶ Get the matplotlib backend name to use with for drawing plots.
Subpackages¶
- schrodinger.Qt package
- Subpackages
- schrodinger.Qt.PyQt5 package
- Submodules
- schrodinger.Qt.PyQt5.QtChart module
- schrodinger.Qt.PyQt5.QtCore module
- schrodinger.Qt.PyQt5.QtGui module
- schrodinger.Qt.PyQt5.QtNetwork module
- schrodinger.Qt.PyQt5.QtOpenGL module
- schrodinger.Qt.PyQt5.QtPrintSupport module
- schrodinger.Qt.PyQt5.QtSvg module
- schrodinger.Qt.PyQt5.QtTest module
- schrodinger.Qt.PyQt5.QtWidgets module
- Submodules
- schrodinger.Qt.PyQt5 package
- Subpackages
- schrodinger.analysis package
- Subpackages
- schrodinger.analysis.enrichment package
- schrodinger.analysis.visanalysis package
- Introduction
- Submodules
- schrodinger.analysis.visanalysis.vdaxis module
- schrodinger.analysis.visanalysis.vdcoordinateframe module
- schrodinger.analysis.visanalysis.vdexception module
- schrodinger.analysis.visanalysis.volumedata module
- schrodinger.analysis.visanalysis.volumedataio module
- schrodinger.analysis.visanalysis.volumedatastructureutils module
- schrodinger.analysis.visanalysis.volumedatautils module
- Submodules
- Subpackages
- schrodinger.application package
- Subpackages
- schrodinger.application.aacg package
- schrodinger.application.bindingsite package
- schrodinger.application.bioluminate package
- Subpackages
- Submodules
- schrodinger.application.bioluminate.bwidgets module
- schrodinger.application.bioluminate.escomp module
- schrodinger.application.bioluminate.interaction_calculator module
- schrodinger.application.bioluminate.pml_menus module
- schrodinger.application.bioluminate.propfilter module
- schrodinger.application.bioluminate.propfilter_ui module
- schrodinger.application.bioluminate.propka_parse module
- schrodinger.application.bioluminate.protein module
- schrodinger.application.bioluminate.protein_protein_docking_shared module
- schrodinger.application.bioluminate.protein_report_widget module
- schrodinger.application.bioluminate.protein_structure_quality module
- schrodinger.application.bioluminate.protein_structure_quality_ui module
- schrodinger.application.bioluminate.reactive_residues module
- schrodinger.application.bioluminate.run_propka module
- schrodinger.application.bioluminate.sliderchart module
- schrodinger.application.bioluminate.surfcomp module
- schrodinger.application.bioluminate.validate_imported_modules module
- schrodinger.application.bioluminate.workspacelabeler module
- schrodinger.application.canvas package
- Submodules
- schrodinger.application.canvas.base module
- schrodinger.application.canvas.cluster module
- schrodinger.application.canvas.clustergui module
- schrodinger.application.canvas.fingerprint module
- schrodinger.application.canvas.fingerprintgui module
- schrodinger.application.canvas.r_group module
- schrodinger.application.canvas.r_group_dee module
- schrodinger.application.canvas.similarity module
- schrodinger.application.canvas.similaritygui module
- schrodinger.application.canvas.topo_descriptors module
- schrodinger.application.canvas.utils module
- Submodules
- schrodinger.application.combiglide package
- schrodinger.application.combinatorial_diversity package
- Submodules
- schrodinger.application.combinatorial_diversity.diversity_fingerprinter module
- schrodinger.application.combinatorial_diversity.diversity_selector module
- schrodinger.application.combinatorial_diversity.diversity_splitter module
- schrodinger.application.combinatorial_diversity.driver_utils module
- schrodinger.application.combinatorial_diversity.splitter_utils module
- Submodules
- schrodinger.application.combinatorial_screen package
- schrodinger.application.dendrogram namespace
- Submodules
- schrodinger.application.dendrogram.chemicalDendrogram module
- schrodinger.application.dendrogram.core_class module
- schrodinger.application.dendrogram.dendroMain module
- schrodinger.application.dendrogram.gradientSelector module
- schrodinger.application.dendrogram.proteinDendrogram module
- schrodinger.application.dendrogram.randTestSet module
- Submodules
- schrodinger.application.desmond package
- Subpackages
- schrodinger.application.desmond.antlr3 package
- Submodules
- schrodinger.application.desmond.antlr3.compat module
- schrodinger.application.desmond.antlr3.constants module
- schrodinger.application.desmond.antlr3.debug module
- schrodinger.application.desmond.antlr3.dfa module
- schrodinger.application.desmond.antlr3.dottreegen module
- schrodinger.application.desmond.antlr3.exceptions module
- schrodinger.application.desmond.antlr3.extras module
- schrodinger.application.desmond.antlr3.main module
- schrodinger.application.desmond.antlr3.recognizers module
- schrodinger.application.desmond.antlr3.streams module
- schrodinger.application.desmond.antlr3.tokens module
- schrodinger.application.desmond.antlr3.tree module
- schrodinger.application.desmond.antlr3.treewizard module
- Submodules
- schrodinger.application.desmond.enhanced_sampling package
- schrodinger.application.desmond.event_analysis package
- schrodinger.application.desmond.multisim package
- schrodinger.application.desmond.mxmd namespace
- schrodinger.application.desmond.stage package
- Subpackages
- schrodinger.application.desmond.stage.app package
- Subpackages
- Submodules
- schrodinger.application.desmond.stage.app.binding_pose module
- schrodinger.application.desmond.stage.app.constant_ph module
- schrodinger.application.desmond.stage.app.matsci module
- schrodinger.application.desmond.stage.app.mxmd module
- schrodinger.application.desmond.stage.app.solubility module
- schrodinger.application.desmond.stage.app.watermap module
- schrodinger.application.desmond.stage.prepare package
- schrodinger.application.desmond.stage.app package
- Submodules
- schrodinger.application.desmond.stage.analysis module
- schrodinger.application.desmond.stage.deprecate module
- schrodinger.application.desmond.stage.fep_mapper module
- schrodinger.application.desmond.stage.jobs module
- schrodinger.application.desmond.stage.launcher module
- schrodinger.application.desmond.stage.run_method_parallel module
- schrodinger.application.desmond.stage.simulate module
- schrodinger.application.desmond.stage.utils module
- schrodinger.application.desmond.stage.workflow module
- Subpackages
- schrodinger.application.desmond.starter package
- Subpackages
- schrodinger.application.desmond.starter.generator package
- Submodules
- schrodinger.application.desmond.starter.generator.abfep module
- schrodinger.application.desmond.starter.generator.bpfep module
- schrodinger.application.desmond.starter.generator.common module
- schrodinger.application.desmond.starter.generator.constant_ph module
- schrodinger.application.desmond.starter.generator.fep_plus module
- schrodinger.application.desmond.starter.generator.fep_solubility module
- schrodinger.application.desmond.starter.generator.mxmd module
- Submodules
- schrodinger.application.desmond.starter.ui package
- Submodules
- schrodinger.application.desmond.starter.ui.abfep module
- schrodinger.application.desmond.starter.ui.bpfep module
- schrodinger.application.desmond.starter.ui.cmdline module
- schrodinger.application.desmond.starter.ui.constant_ph module
- schrodinger.application.desmond.starter.ui.fep_plus module
- schrodinger.application.desmond.starter.ui.fep_solubility module
- schrodinger.application.desmond.starter.ui.mxmd module
- Submodules
- schrodinger.application.desmond.starter.generator package
- Submodules
- Subpackages
- schrodinger.application.desmond.antlr3 package
- Submodules
- schrodinger.application.desmond.ana module
- schrodinger.application.desmond.automatic_analysis_generator module
- schrodinger.application.desmond.autopartition module
- schrodinger.application.desmond.bennett module
- schrodinger.application.desmond.bld_def module
- schrodinger.application.desmond.bld_ver module
- schrodinger.application.desmond.cmdline module
- schrodinger.application.desmond.cmj module
- schrodinger.application.desmond.cms module
- schrodinger.application.desmond.cns_io module
- schrodinger.application.desmond.config module
- schrodinger.application.desmond.constants module
- schrodinger.application.desmond.correlation_tau module
- schrodinger.application.desmond.cwidget module
- schrodinger.application.desmond.deltaE module
- schrodinger.application.desmond.depictor module
- schrodinger.application.desmond.desmond_advanced_tab_ui module
- schrodinger.application.desmond.enhsamp module
- schrodinger.application.desmond.envir module
- schrodinger.application.desmond.fep_dialog module
- schrodinger.application.desmond.fep_edge_data module
- schrodinger.application.desmond.fep_edge_data_classifier module
- schrodinger.application.desmond.fep_edge_report_maker module
- schrodinger.application.desmond.fep_mapping module
- schrodinger.application.desmond.fep_net_charge module
- schrodinger.application.desmond.fep_reporter module
- schrodinger.application.desmond.fep_schedule module
- schrodinger.application.desmond.fep_scholar_msj_generator module
- schrodinger.application.desmond.fep_scholar_rules module
- schrodinger.application.desmond.fep_scholar_util module
- schrodinger.application.desmond.fep_struc module
- schrodinger.application.desmond.fep_util module
- schrodinger.application.desmond.fepana module
- schrodinger.application.desmond.feputils module
- schrodinger.application.desmond.ffiostructure module
- schrodinger.application.desmond.frag_snap module
- schrodinger.application.desmond.gaussian_filter module
- schrodinger.application.desmond.gchart module
- schrodinger.application.desmond.gcmc_utils module
- schrodinger.application.desmond.gconfig module
- schrodinger.application.desmond.gui module
- schrodinger.application.desmond.image_generator module
- schrodinger.application.desmond.input_group_ui module
- schrodinger.application.desmond.launch_utils module
- schrodinger.application.desmond.license module
- schrodinger.application.desmond.maestro module
- schrodinger.application.desmond.mapper_msj_generator module
- schrodinger.application.desmond.measurement module
- schrodinger.application.desmond.membrane_utils module
- schrodinger.application.desmond.memory module
- schrodinger.application.desmond.meta module
- schrodinger.application.desmond.move_alchem_ions module
- schrodinger.application.desmond.mplchart module
- schrodinger.application.desmond.multisimstartup module
- schrodinger.application.desmond.new_fep_edge_data module
- schrodinger.application.desmond.picklejar module
- schrodinger.application.desmond.platforms module
- schrodinger.application.desmond.predict_remd_temp module
- schrodinger.application.desmond.process_fep_traj module
- schrodinger.application.desmond.queue module
- schrodinger.application.desmond.r_group_asl module
- schrodinger.application.desmond.remd module
- schrodinger.application.desmond.repair_cms module
- schrodinger.application.desmond.replica_dE module
- schrodinger.application.desmond.replica_exchange_review module
- schrodinger.application.desmond.replica_sid_generator module
- schrodinger.application.desmond.report_helper module
- schrodinger.application.desmond.rest_inp module
- schrodinger.application.desmond.rest_tab_ui module
- schrodinger.application.desmond.rl_helper module
- schrodinger.application.desmond.simulation_block_data module
- schrodinger.application.desmond.simulation_block_test module
- schrodinger.application.desmond.smarts module
- schrodinger.application.desmond.solubility_utils module
- schrodinger.application.desmond.struc module
- schrodinger.application.desmond.system_builder_inp module
- schrodinger.application.desmond.system_builder_util module
- schrodinger.application.desmond.systype module
- schrodinger.application.desmond.torsion_related module
- schrodinger.application.desmond.util module
- schrodinger.application.desmond.xvfbwrapper module
- Subpackages
- schrodinger.application.epik package
- schrodinger.application.glide package
- Subpackages
- Submodules
- schrodinger.application.glide.ensemble_selection module
- schrodinger.application.glide.glide module
- schrodinger.application.glide.glideanalysis module
- schrodinger.application.glide.gui module
- schrodinger.application.glide.http_client module
- schrodinger.application.glide.http_server module
- schrodinger.application.glide.ligand_designer module
- schrodinger.application.glide.poseviewconvert module
- schrodinger.application.glide.utils module
- schrodinger.application.glide.xpdes module
- schrodinger.application.jaguar package
- Subpackages
- schrodinger.application.jaguar.gui package
- Subpackages
- schrodinger.application.jaguar.gui.tabs package
- Subpackages
- schrodinger.application.jaguar.gui.tabs.input_sub_tabs package
- schrodinger.application.jaguar.gui.tabs.sub_tab_widgets package
- Submodules
- schrodinger.application.jaguar.gui.tabs.sub_tab_widgets.base_widgets module
- schrodinger.application.jaguar.gui.tabs.sub_tab_widgets.basis_set_widgets module
- schrodinger.application.jaguar.gui.tabs.sub_tab_widgets.charge_constraints_widgets module
- schrodinger.application.jaguar.gui.tabs.sub_tab_widgets.charge_selector module
- Submodules
- Submodules
- schrodinger.application.jaguar.gui.tabs.base_tab module
- schrodinger.application.jaguar.gui.tabs.coordinates module
- schrodinger.application.jaguar.gui.tabs.input_tab module
- schrodinger.application.jaguar.gui.tabs.irc_tab module
- schrodinger.application.jaguar.gui.tabs.molecule_tab module
- schrodinger.application.jaguar.gui.tabs.multi_structure_tab module
- schrodinger.application.jaguar.gui.tabs.optimization_tab module
- schrodinger.application.jaguar.gui.tabs.output_tab module
- schrodinger.application.jaguar.gui.tabs.properties_tab module
- schrodinger.application.jaguar.gui.tabs.reaction_molecules_tab module
- schrodinger.application.jaguar.gui.tabs.reaction_properties_tab module
- schrodinger.application.jaguar.gui.tabs.reaction_tab module
- schrodinger.application.jaguar.gui.tabs.scan_tab module
- schrodinger.application.jaguar.gui.tabs.scf_tab module
- schrodinger.application.jaguar.gui.tabs.solvation_tab module
- schrodinger.application.jaguar.gui.tabs.theory_tab module
- schrodinger.application.jaguar.gui.tabs.transition_state_tab module
- Subpackages
- schrodinger.application.jaguar.gui.ui package
- Subpackages
- Submodules
- schrodinger.application.jaguar.gui.ui.config_dialog_jaguar_ui module
- schrodinger.application.jaguar.gui.ui.coordinate_dialog_ui module
- schrodinger.application.jaguar.gui.ui.define_smarts_panel_ui module
- schrodinger.application.jaguar.gui.ui.edit_dialog_ui module
- schrodinger.application.jaguar.gui.ui.excited_state_widget_ui module
- schrodinger.application.jaguar.gui.ui.input_hb_bottom_ui module
- schrodinger.application.jaguar.gui.ui.input_hb_top_ui module
- schrodinger.application.jaguar.gui.ui.input_pka_bottom_ui module
- schrodinger.application.jaguar.gui.ui.input_pka_top_ui module
- schrodinger.application.jaguar.gui.ui.input_std_bottom_ui module
- schrodinger.application.jaguar.gui.ui.input_top_ui module
- schrodinger.application.jaguar.gui.ui.irc_bottom_ui module
- schrodinger.application.jaguar.gui.ui.irc_top_ui module
- schrodinger.application.jaguar.gui.ui.molecule_pka_bottom_ui module
- schrodinger.application.jaguar.gui.ui.molecule_std_bottom_ui module
- schrodinger.application.jaguar.gui.ui.molecule_top_ui module
- schrodinger.application.jaguar.gui.ui.multi_structures_ui module
- schrodinger.application.jaguar.gui.ui.optimization_tab_ui module
- schrodinger.application.jaguar.gui.ui.output_tab_ui module
- schrodinger.application.jaguar.gui.ui.pka_smarts_page_ui module
- schrodinger.application.jaguar.gui.ui.properties_tab_ui module
- schrodinger.application.jaguar.gui.ui.reaction_molecules_tab_ui module
- schrodinger.application.jaguar.gui.ui.reaction_properties_tab_ui module
- schrodinger.application.jaguar.gui.ui.reaction_tab_ui module
- schrodinger.application.jaguar.gui.ui.scan_tab_nextgeom_ui module
- schrodinger.application.jaguar.gui.ui.scan_tab_ui module
- schrodinger.application.jaguar.gui.ui.scf_tab_ui module
- schrodinger.application.jaguar.gui.ui.solvent_pka_tab_ui module
- schrodinger.application.jaguar.gui.ui.solvent_tab_ui module
- schrodinger.application.jaguar.gui.ui.spin_treatment_widget_ui module
- schrodinger.application.jaguar.gui.ui.theory_tab_ui module
- schrodinger.application.jaguar.gui.ui.transition_state_bottom_ui module
- schrodinger.application.jaguar.gui.ui.transition_state_top_ui module
- schrodinger.application.jaguar.gui.tabs package
- Submodules
- schrodinger.application.jaguar.gui.base_panel module
- schrodinger.application.jaguar.gui.basis_selector module
- schrodinger.application.jaguar.gui.edit_dialog module
- schrodinger.application.jaguar.gui.filedialog module
- schrodinger.application.jaguar.gui.input_tab_widgets module
- schrodinger.application.jaguar.gui.input_tab_widgets_hb module
- schrodinger.application.jaguar.gui.input_tab_widgets_pka module
- schrodinger.application.jaguar.gui.solvent_selector module
- schrodinger.application.jaguar.gui.theory_selector module
- schrodinger.application.jaguar.gui.theory_tab_widgets module
- schrodinger.application.jaguar.gui.utils module
- Subpackages
- schrodinger.application.jaguar.gui package
- Submodules
- schrodinger.application.jaguar.autots_bonding module
- schrodinger.application.jaguar.autots_constants module
- schrodinger.application.jaguar.autots_exceptions module
- schrodinger.application.jaguar.autots_input module
- schrodinger.application.jaguar.autots_input_constants module
- schrodinger.application.jaguar.autots_keywords module
- schrodinger.application.jaguar.autots_rmsd module
- schrodinger.application.jaguar.autots_validation module
- schrodinger.application.jaguar.basis module
- schrodinger.application.jaguar.check_headers module
- schrodinger.application.jaguar.constants module
- schrodinger.application.jaguar.exceptions module
- schrodinger.application.jaguar.file_logger module
- schrodinger.application.jaguar.global_macros module
- schrodinger.application.jaguar.input module
- schrodinger.application.jaguar.jaguar_config_dialog module
- schrodinger.application.jaguar.jaguar_diff module
- schrodinger.application.jaguar.jaguar_keyword_utils module
- schrodinger.application.jaguar.keywordDB module
- schrodinger.application.jaguar.make_headers module
- schrodinger.application.jaguar.mmjag module
- schrodinger.application.jaguar.neural_network_optimizer module
- schrodinger.application.jaguar.output module
- schrodinger.application.jaguar.results module
- schrodinger.application.jaguar.scan module
- schrodinger.application.jaguar.solvation_input module
- schrodinger.application.jaguar.solvation_keywords module
- schrodinger.application.jaguar.solvation_validation module
- schrodinger.application.jaguar.textparser module
- schrodinger.application.jaguar.user_config module
- schrodinger.application.jaguar.utils module
- schrodinger.application.jaguar.validation module
- schrodinger.application.jaguar.workflow_input module
- schrodinger.application.jaguar.workflow_keywords module
- schrodinger.application.jaguar.workflow_validation module
- Subpackages
- schrodinger.application.job_monitor package
- Submodules
- schrodinger.application.job_monitor.buttons module
- schrodinger.application.job_monitor.diagnostics_dialog_ui module
- schrodinger.application.job_monitor.file_browser_ui module
- schrodinger.application.job_monitor.job_info_view_ui module
- schrodinger.application.job_monitor.job_monitor_diagnostics_dialog module
- schrodinger.application.job_monitor.job_monitor_file_browser module
- schrodinger.application.job_monitor.job_monitor_gui module
- schrodinger.application.job_monitor.job_monitor_icons_rc module
- schrodinger.application.job_monitor.job_monitor_models module
- schrodinger.application.job_monitor.job_monitor_progress_bar module
- schrodinger.application.job_monitor.job_monitor_stylesheets module
- schrodinger.application.job_monitor.job_monitor_table module
- schrodinger.application.job_monitor.job_monitor_widgets module
- schrodinger.application.job_monitor.top_level_view_ui module
- schrodinger.application.job_monitor.util module
- Submodules
- schrodinger.application.jobserver_cert_gui_dir namespace
- schrodinger.application.licensing package
- schrodinger.application.ligprep package
- schrodinger.application.livedesign package
- Submodules
- schrodinger.application.livedesign.constants module
- schrodinger.application.livedesign.data_classes module
- schrodinger.application.livedesign.entry_types module
- schrodinger.application.livedesign.export_map_manager module
- schrodinger.application.livedesign.export_models module
- schrodinger.application.livedesign.export_setup_ui module
- schrodinger.application.livedesign.export_tasks module
- schrodinger.application.livedesign.export_ui module
- schrodinger.application.livedesign.icons_rc module
- schrodinger.application.livedesign.import_controller module
- schrodinger.application.livedesign.ld_base_classes module
- schrodinger.application.livedesign.ld_export module
- schrodinger.application.livedesign.ld_export_gui module
- schrodinger.application.livedesign.ld_folder_tree module
- schrodinger.application.livedesign.ld_import module
- schrodinger.application.livedesign.ld_utils module
- schrodinger.application.livedesign.live_report_widget module
- schrodinger.application.livedesign.live_report_widget_ui module
- schrodinger.application.livedesign.login module
- schrodinger.application.livedesign.login2_ui module
- schrodinger.application.livedesign.login_gui module
- schrodinger.application.livedesign.login_gui2 module
- schrodinger.application.livedesign.login_ui module
- schrodinger.application.livedesign.maestro_sync module
- schrodinger.application.livedesign.panel_components module
- schrodinger.application.livedesign.pose_name_panel module
- schrodinger.application.livedesign.pose_name_panel_ui module
- schrodinger.application.livedesign.summary module
- schrodinger.application.livedesign.summary_ui module
- schrodinger.application.livedesign.upload_utils module
- Submodules
- schrodinger.application.macromodel package
- schrodinger.application.matsci package
- Subpackages
- schrodinger.application.matsci.cctbx package
- schrodinger.application.matsci.elasticity package
- schrodinger.application.matsci.espresso package
- schrodinger.application.matsci.genetic_optimization package
- schrodinger.application.matsci.gsas package
- Submodules
- schrodinger.application.matsci.gsas.ElementTable module
- schrodinger.application.matsci.gsas.GSASIIElem module
- schrodinger.application.matsci.gsas.GSASIIfiles module
- schrodinger.application.matsci.gsas.GSASIIlattice module
- schrodinger.application.matsci.gsas.GSASIImath module
- schrodinger.application.matsci.gsas.GSASIIpwd module
- schrodinger.application.matsci.gsas.GSASIIspc module
- schrodinger.application.matsci.gsas.atmdata module
- Submodules
- schrodinger.application.matsci.mlearn package
- Subpackages
- schrodinger.application.matsci.mlearn.sklearn_json package
- Submodules
- schrodinger.application.matsci.mlearn.sklearn_json.classification module
- schrodinger.application.matsci.mlearn.sklearn_json.common module
- schrodinger.application.matsci.mlearn.sklearn_json.csr module
- schrodinger.application.matsci.mlearn.sklearn_json.decomposition module
- schrodinger.application.matsci.mlearn.sklearn_json.regression module
- Submodules
- schrodinger.application.matsci.mlearn.sklearn_json package
- Submodules
- Subpackages
- schrodinger.application.matsci.nano package
- Submodules
- schrodinger.application.matsci.nano.check module
- schrodinger.application.matsci.nano.constants module
- schrodinger.application.matsci.nano.interface_mod module
- schrodinger.application.matsci.nano.particle module
- schrodinger.application.matsci.nano.plane module
- schrodinger.application.matsci.nano.sheet module
- schrodinger.application.matsci.nano.slab module
- schrodinger.application.matsci.nano.space_groups module
- schrodinger.application.matsci.nano.surfaces_interfaces_mod module
- schrodinger.application.matsci.nano.tools module
- schrodinger.application.matsci.nano.tube module
- schrodinger.application.matsci.nano.util module
- schrodinger.application.matsci.nano.xtal module
- Submodules
- schrodinger.application.matsci.qb_sdk package
- schrodinger.application.matsci.qexsd package
- Subpackages
- schrodinger.application.matsci.qexsd.qespresso package
- Subpackages
- schrodinger.application.matsci.qexsd.qespresso.utils package
- schrodinger.application.matsci.qexsd.qespresso.xsdtypes package
- Submodules
- schrodinger.application.matsci.qexsd.qespresso.xsdtypes.etree module
- schrodinger.application.matsci.qexsd.qespresso.xsdtypes.exceptions module
- schrodinger.application.matsci.qexsd.qespresso.xsdtypes.xmldocument module
- schrodinger.application.matsci.qexsd.qespresso.xsdtypes.xmlschema module
- schrodinger.application.matsci.qexsd.qespresso.xsdtypes.xsdtypes module
- Submodules
- Submodules
- schrodinger.application.matsci.qexsd.qespresso.cards module
- schrodinger.application.matsci.qexsd.qespresso.converters module
- schrodinger.application.matsci.qexsd.qespresso.documents module
- schrodinger.application.matsci.qexsd.qespresso.exceptions module
- schrodinger.application.matsci.qexsd.qespresso.options module
- Subpackages
- schrodinger.application.matsci.qexsd.tests namespace
- schrodinger.application.matsci.qexsd.qespresso package
- Submodules
- Subpackages
- schrodinger.application.matsci.rxn_channel package
- schrodinger.application.matsci.siteselector package
- Submodules
- schrodinger.application.matsci.amorphous module
- schrodinger.application.matsci.anharmonic module
- schrodinger.application.matsci.appbase module
- schrodinger.application.matsci.atom_group module
- schrodinger.application.matsci.atomicsymbols module
- schrodinger.application.matsci.atomicsymbolsgui module
- schrodinger.application.matsci.bandshape_utils module
- schrodinger.application.matsci.basiselements module
- schrodinger.application.matsci.boltzmann_avg_props module
- schrodinger.application.matsci.buildcomplex module
- schrodinger.application.matsci.buildcomplex2d module
- schrodinger.application.matsci.builderwidgets module
- schrodinger.application.matsci.cg_mapping module
- schrodinger.application.matsci.cgforcefield module
- schrodinger.application.matsci.cgforcefieldgui module
- schrodinger.application.matsci.chargegui module
- schrodinger.application.matsci.clusterstruct module
- schrodinger.application.matsci.clusterstructgui module
- schrodinger.application.matsci.coarsegrain module
- schrodinger.application.matsci.codeutils module
- schrodinger.application.matsci.colorutils module
- schrodinger.application.matsci.configdlgs module
- schrodinger.application.matsci.controlicons_rc module
- schrodinger.application.matsci.desmondutils module
- schrodinger.application.matsci.deswidgets module
- schrodinger.application.matsci.elementalprops module
- schrodinger.application.matsci.enc module
- schrodinger.application.matsci.enumeration module
- schrodinger.application.matsci.equilibrium_md module
- schrodinger.application.matsci.etarotamers module
- schrodinger.application.matsci.etatoggle module
- schrodinger.application.matsci.fragments module
- schrodinger.application.matsci.freevolume module
- schrodinger.application.matsci.geometry module
- schrodinger.application.matsci.graph module
- schrodinger.application.matsci.guibase module
- schrodinger.application.matsci.gutils module
- schrodinger.application.matsci.jaguar_multistage_workflow_utils module
- schrodinger.application.matsci.jaguar_restart module
- schrodinger.application.matsci.jaguarworkflows module
- schrodinger.application.matsci.jagwidgets module
- schrodinger.application.matsci.jobdirdlg module
- schrodinger.application.matsci.jobutils module
- schrodinger.application.matsci.jwsteps module
- schrodinger.application.matsci.kmc module
- schrodinger.application.matsci.kmcgui module
- schrodinger.application.matsci.maestrocmds module
- schrodinger.application.matsci.mecp_mod module
- schrodinger.application.matsci.montecarlo module
- schrodinger.application.matsci.msconst module
- schrodinger.application.matsci.msutils module
- schrodinger.application.matsci.mswidgets module
- schrodinger.application.matsci.multiapp module
- schrodinger.application.matsci.optoelectronics module
- schrodinger.application.matsci.order_parameter_mod module
- schrodinger.application.matsci.packmol module
- schrodinger.application.matsci.parserutils module
- schrodinger.application.matsci.pbcutils module
- schrodinger.application.matsci.permittivity module
- schrodinger.application.matsci.polymer module
- schrodinger.application.matsci.property_names module
- schrodinger.application.matsci.qualityslider module
- schrodinger.application.matsci.qubec_utils module
- schrodinger.application.matsci.reaction_workflow_gui_utils module
- schrodinger.application.matsci.reaction_workflow_utils module
- schrodinger.application.matsci.reorder module
- schrodinger.application.matsci.reordergui module
- schrodinger.application.matsci.reportutils module
- schrodinger.application.matsci.rxn_path module
- schrodinger.application.matsci.sculptcomplex module
- schrodinger.application.matsci.shapes module
- schrodinger.application.matsci.sliceplot module
- schrodinger.application.matsci.smartsutils module
- schrodinger.application.matsci.smartsutilsgui module
- schrodinger.application.matsci.spectra module
- schrodinger.application.matsci.stress_strain module
- schrodinger.application.matsci.swap_fragments_utils module
- schrodinger.application.matsci.test module
- schrodinger.application.matsci.textlogger module
- schrodinger.application.matsci.uq_utils module
- schrodinger.application.matsci.xrd module
- schrodinger.application.matsci.zmutils module
- Subpackages
- schrodinger.application.medchem package
- schrodinger.application.mopac package
- Submodules
- schrodinger.application.mopac.exceptions module
- schrodinger.application.mopac.mopac_backend module
- schrodinger.application.mopac.mopac_launchers module
- schrodinger.application.mopac.mopac_parser module
- schrodinger.application.mopac.mopac_startup module
- schrodinger.application.mopac.results71 module
- schrodinger.application.mopac.results_main module
- schrodinger.application.mopac.structure_launchers module
- schrodinger.application.mopac.utils module
- Submodules
- schrodinger.application.msv package
- Subpackages
- schrodinger.application.msv.gui package
- Subpackages
- schrodinger.application.msv.gui.dialogs package
- Submodules
- schrodinger.application.msv.gui.dialogs.aggregate_property_dialog_ui module
- schrodinger.application.msv.gui.dialogs.analyze_binding_site_ui module
- schrodinger.application.msv.gui.dialogs.blast_results_dialog_ui module
- schrodinger.application.msv.gui.dialogs.blast_search_dialog_ui module
- schrodinger.application.msv.gui.dialogs.blast_settings_dialog_ui module
- schrodinger.application.msv.gui.dialogs.color_editor_ui module
- schrodinger.application.msv.gui.dialogs.compare_seqs_dialog_ui module
- schrodinger.application.msv.gui.dialogs.compute_seq_desc_dialog_ui module
- schrodinger.application.msv.gui.dialogs.dlg_widgets module
- schrodinger.application.msv.gui.dialogs.edit_min_max_ui module
- schrodinger.application.msv.gui.dialogs.edit_sequence_as_text_ui module
- schrodinger.application.msv.gui.dialogs.get_sequences_dialog_ui module
- schrodinger.application.msv.gui.dialogs.manage_seq_prop_dialog_ui module
- schrodinger.application.msv.gui.dialogs.paste_sequence_dialog_ui module
- schrodinger.application.msv.gui.dialogs.rename_sequence_dialog_ui module
- schrodinger.application.msv.gui.dialogs.renumber_residues_ui module
- schrodinger.application.msv.gui.dialogs.seqlinkunlink_ui module
- schrodinger.application.msv.gui.dialogs.structure_align_results_dialog_ui module
- Submodules
- schrodinger.application.msv.gui.homology_modeling namespace
- Submodules
- schrodinger.application.msv.gui.homology_modeling.constants module
- schrodinger.application.msv.gui.homology_modeling.hm_models module
- schrodinger.application.msv.gui.homology_modeling.homology_modeling_step_ui module
- schrodinger.application.msv.gui.homology_modeling.homology_modeling_ui module
- schrodinger.application.msv.gui.homology_modeling.homology_multiple_view_tabs_ui module
- schrodinger.application.msv.gui.homology_modeling.homology_panel module
- schrodinger.application.msv.gui.homology_modeling.ligand_dialog module
- schrodinger.application.msv.gui.homology_modeling.ligand_dialog_ui module
- schrodinger.application.msv.gui.homology_modeling.settings_dialog module
- schrodinger.application.msv.gui.homology_modeling.settings_dialog_ui module
- schrodinger.application.msv.gui.homology_modeling.steps module
- schrodinger.application.msv.gui.homology_modeling.view_tab_table module
- Submodules
- schrodinger.application.msv.gui.dialogs package
- Submodules
- schrodinger.application.msv.gui.alignment_pane module
- schrodinger.application.msv.gui.alignment_pane_ui module
- schrodinger.application.msv.gui.binding_site_aln_dialog_ui module
- schrodinger.application.msv.gui.color module
- schrodinger.application.msv.gui.color_ramp module
- schrodinger.application.msv.gui.color_widgets module
- schrodinger.application.msv.gui.dendrogram_adv_options_ui module
- schrodinger.application.msv.gui.dendrogram_viewer module
- schrodinger.application.msv.gui.dendrogram_viewer_ui module
- schrodinger.application.msv.gui.gui_alignment module
- schrodinger.application.msv.gui.gui_models module
- schrodinger.application.msv.gui.history module
- schrodinger.application.msv.gui.menu module
- schrodinger.application.msv.gui.msv_gui module
- schrodinger.application.msv.gui.msv_rc module
- schrodinger.application.msv.gui.msv_widget module
- schrodinger.application.msv.gui.multiple_seq_aln_dialog_ui module
- schrodinger.application.msv.gui.pairwise_seq_aln_dialog_ui module
- schrodinger.application.msv.gui.picking module
- schrodinger.application.msv.gui.popups module
- schrodinger.application.msv.gui.protein_structure_aln_dialog_ui module
- schrodinger.application.msv.gui.row_delegates module
- schrodinger.application.msv.gui.stylesheets module
- schrodinger.application.msv.gui.tab_widget module
- schrodinger.application.msv.gui.toolbar module
- schrodinger.application.msv.gui.toolbar_ui module
- schrodinger.application.msv.gui.validate_align module
- schrodinger.application.msv.gui.view module
- schrodinger.application.msv.gui.viewconstants module
- schrodinger.application.msv.gui.viewmodel module
- Subpackages
- schrodinger.application.msv.gui package
- Submodules
- Subpackages
- schrodinger.application.pathfinder package
- Submodules
- schrodinger.application.pathfinder.aligner module
- schrodinger.application.pathfinder.analysis module
- schrodinger.application.pathfinder.filtering module
- schrodinger.application.pathfinder.molio module
- schrodinger.application.pathfinder.multiroute module
- schrodinger.application.pathfinder.reaction module
- schrodinger.application.pathfinder.render module
- schrodinger.application.pathfinder.route module
- schrodinger.application.pathfinder.synthesis module
- Submodules
- schrodinger.application.phase package
- Subpackages
- Submodules
- schrodinger.application.phase.compare_utils module
- schrodinger.application.phase.constants module
- schrodinger.application.phase.create_xvol module
- schrodinger.application.phase.featureselector module
- schrodinger.application.phase.hypothesis module
- schrodinger.application.phase.hypothesis_binding_modes module
- schrodinger.application.phase.input module
- schrodinger.application.phase.license module
- schrodinger.application.phase.phase_markers module
- schrodinger.application.phase.phase_widgets module
- schrodinger.application.phase.pt_hypothesis module
- schrodinger.application.phase.utils module
- schrodinger.application.pldb package
- schrodinger.application.prepwizard2 package
- schrodinger.application.prime package
- schrodinger.application.qsite package
- schrodinger.application.scaffold_enumeration package
- Submodules
- schrodinger.application.scaffold_enumeration.atomlist module
- schrodinger.application.scaffold_enumeration.common module
- schrodinger.application.scaffold_enumeration.cxsmiles module
- schrodinger.application.scaffold_enumeration.layered module
- schrodinger.application.scaffold_enumeration.linknode module
- schrodinger.application.scaffold_enumeration.markush module
- schrodinger.application.scaffold_enumeration.mdl module
- schrodinger.application.scaffold_enumeration.posvarbond module
- schrodinger.application.scaffold_enumeration.rdcml module
- Submodules
- schrodinger.application.scisol package
- schrodinger.application.steps package
- Submodules
- schrodinger.application.steps.basesteps module
- schrodinger.application.steps.converters module
- schrodinger.application.steps.dataclasses module
- schrodinger.application.steps.docking module
- schrodinger.application.steps.enumerators module
- schrodinger.application.steps.filters module
- schrodinger.application.steps.licensing module
- schrodinger.application.steps.ligprep module
- schrodinger.application.steps.scorers module
- schrodinger.application.steps.test module
- schrodinger.application.steps.transformers module
- schrodinger.application.steps.utils module
- Submodules
- schrodinger.application.vss package
- schrodinger.application.vsw package
- Subpackages
- schrodinger.application.vsw.stages package
- Submodules
- schrodinger.application.vsw.stages.combine module
- schrodinger.application.vsw.stages.convert module
- schrodinger.application.vsw.stages.filtering module
- schrodinger.application.vsw.stages.gencodes module
- schrodinger.application.vsw.stages.glide module
- schrodinger.application.vsw.stages.macromodel module
- schrodinger.application.vsw.stages.phase module
- schrodinger.application.vsw.stages.prime module
- schrodinger.application.vsw.stages.pull module
- schrodinger.application.vsw.stages.qikprop module
- schrodinger.application.vsw.stages.qsite module
- schrodinger.application.vsw.stages.rmsd module
- schrodinger.application.vsw.stages.semiemp module
- Submodules
- schrodinger.application.vsw.stages package
- Submodules
- Subpackages
- schrodinger.application.watermap package
- Submodules
- Subpackages
- schrodinger.comparison package
- schrodinger.forcefield package
- schrodinger.graphics3d package
- Submodules
- schrodinger.graphics3d.arrow module
- schrodinger.graphics3d.box module
- schrodinger.graphics3d.common module
- schrodinger.graphics3d.gridbox module
- schrodinger.graphics3d.hemisphere module
- schrodinger.graphics3d.lines module
- schrodinger.graphics3d.polygon module
- schrodinger.graphics3d.polyhedron module
- schrodinger.graphics3d.sphere module
- schrodinger.graphics3d.torus module
- schrodinger.graphics3d.tube module
- Submodules
- schrodinger.infra package
- Subpackages
- Submodules
- schrodinger.infra.ark module
- schrodinger.infra.canvas module
- schrodinger.infra.canvas2d module
- schrodinger.infra.color module
- schrodinger.infra.epydoc_to_sphinx module
- schrodinger.infra.exception_handler module
- schrodinger.infra.fast3d module
- schrodinger.infra.gpgpu_utils module
- schrodinger.infra.growthspace module
- schrodinger.infra.jobhub module
- schrodinger.infra.licensing module
- schrodinger.infra.mm module
- schrodinger.infra.mmbitset module
- schrodinger.infra.mmcheck module
- schrodinger.infra.mmerr module
- schrodinger.infra.mmim module
- schrodinger.infra.mminit module
- schrodinger.infra.mmjob module
- schrodinger.infra.mmkv module
- schrodinger.infra.mmlist module
- schrodinger.infra.mmobject module
- schrodinger.infra.mmproj module
- schrodinger.infra.mmreflect module
- schrodinger.infra.mmsurf module
- schrodinger.infra.mopac module
- schrodinger.infra.phase module
- schrodinger.infra.projectmodel module
- schrodinger.infra.structure module
- schrodinger.infra.table module
- schrodinger.infra.test module
- schrodinger.infra.util module
- schrodinger.job package
- Submodules
- schrodinger.job.app module
- schrodinger.job.cert module
- schrodinger.job.download module
- schrodinger.job.driver_decorator module
- schrodinger.job.files module
- schrodinger.job.host_check module
- schrodinger.job.hunt_stub module
- schrodinger.job.jobcontrol module
- schrodinger.job.jobhandler module
- schrodinger.job.jobwriter module
- schrodinger.job.launchapi module
- schrodinger.job.launcher module
- schrodinger.job.launchparams module
- schrodinger.job.queue module
- schrodinger.job.remote_command module
- schrodinger.job.resource module
- schrodinger.job.server module
- schrodinger.job.util module
- Submodules
- schrodinger.livedesign namespace
- schrodinger.maestro package
- schrodinger.maestro_utils namespace
- schrodinger.math namespace
- schrodinger.models package
- schrodinger.pipeline package
- Subpackages
- schrodinger.pipeline.stages package
- Submodules
- schrodinger.pipeline.stages.canvas module
- schrodinger.pipeline.stages.combine module
- schrodinger.pipeline.stages.convert module
- schrodinger.pipeline.stages.example module
- schrodinger.pipeline.stages.filtering module
- schrodinger.pipeline.stages.gencodes module
- schrodinger.pipeline.stages.glide module
- schrodinger.pipeline.stages.ligprep module
- schrodinger.pipeline.stages.macromodel module
- schrodinger.pipeline.stages.phase module
- schrodinger.pipeline.stages.prime module
- schrodinger.pipeline.stages.pull module
- schrodinger.pipeline.stages.qikprop module
- schrodinger.pipeline.stages.qsite module
- schrodinger.pipeline.stages.rmsd module
- schrodinger.pipeline.stages.semiemp module
- Submodules
- schrodinger.pipeline.stages package
- Submodules
- Subpackages
- schrodinger.project package
- schrodinger.protein package
- Subpackages
- schrodinger.protein.tasks namespace
- Submodules
- schrodinger.protein.tasks.binding_site_align module
- schrodinger.protein.tasks.blast module
- schrodinger.protein.tasks.clustal module
- schrodinger.protein.tasks.descriptors module
- schrodinger.protein.tasks.kinase module
- schrodinger.protein.tasks.mock_blast_output module
- schrodinger.protein.tasks.muscle module
- schrodinger.protein.tasks.optimize_alignment module
- schrodinger.protein.tasks.pfam module
- schrodinger.protein.tasks.sta module
- schrodinger.protein.tasks.structure_alignment module
- Submodules
- schrodinger.protein.tasks namespace
- Submodules
- schrodinger.protein.align module
- schrodinger.protein.alignment module
- schrodinger.protein.analysis module
- schrodinger.protein.analysis_params module
- schrodinger.protein.annotation module
- schrodinger.protein.assignment module
- schrodinger.protein.biounit module
- schrodinger.protein.buildpeptide module
- schrodinger.protein.captermini module
- schrodinger.protein.constants module
- schrodinger.protein.findhets module
- schrodinger.protein.getpdb module
- schrodinger.protein.getpdb_utility module
- schrodinger.protein.helix module
- schrodinger.protein.membrane module
- schrodinger.protein.nonstandard_residues module
- schrodinger.protein.pdbname module
- schrodinger.protein.predictors module
- schrodinger.protein.properties module
- schrodinger.protein.reliability module
- schrodinger.protein.remediate module
- schrodinger.protein.renumber_residues module
- schrodinger.protein.residue module
- schrodinger.protein.rotamers module
- schrodinger.protein.seqres module
- schrodinger.protein.sequence module
- Subpackages
- schrodinger.rdkit namespace
- schrodinger.stepper namespace
- schrodinger.structure module
- schrodinger.structutils package
- Subpackages
- schrodinger.structutils.interactions package
- Examples
- Submodules
- schrodinger.structutils.interactions.hbond module
- schrodinger.structutils.interactions.pi module
- schrodinger.structutils.interactions.protein_protein_interactions module
- schrodinger.structutils.interactions.salt_bridge module
- schrodinger.structutils.interactions.ssbond module
- schrodinger.structutils.interactions.steric_clash module
- schrodinger.structutils.interactions package
- Submodules
- schrodinger.structutils.analyze module
- schrodinger.structutils.assignbondorders module
- schrodinger.structutils.block_data module
- schrodinger.structutils.build module
- schrodinger.structutils.check module
- schrodinger.structutils.color module
- schrodinger.structutils.createfragments module
- schrodinger.structutils.filter module
- schrodinger.structutils.interactionfp module
- schrodinger.structutils.io module
- schrodinger.structutils.markush_enumerate module
- schrodinger.structutils.measure module
- schrodinger.structutils.minimize module
- schrodinger.structutils.pbc_tools module
- schrodinger.structutils.properties module
- schrodinger.structutils.residue module
- schrodinger.structutils.rgroup_enumerate module
- schrodinger.structutils.rings module
- schrodinger.structutils.ringspear module
- schrodinger.structutils.rmsd module
- schrodinger.structutils.shuffle module
- schrodinger.structutils.sitealign module
- schrodinger.structutils.smiles module
- schrodinger.structutils.smilesfilter module
- schrodinger.structutils.sort module
- schrodinger.structutils.standard_nuclear_orientation module
- schrodinger.structutils.structalign module
- schrodinger.structutils.transform module
- Subpackages
- schrodinger.tasks package
- schrodinger.test package
- Subpackages
- schrodinger.test.hypothesis namespace
- schrodinger.test.performance package
- schrodinger.test.pytest package
- schrodinger.test.stu package
- Subpackages
- schrodinger.test.stu.outcomes package
- Subpackages
- schrodinger.test.stu.outcomes.custom package
- Submodules
- schrodinger.test.stu.outcomes.custom.asl_count module
- schrodinger.test.stu.outcomes.custom.demo_custom_workup module
- schrodinger.test.stu.outcomes.custom.enum module
- schrodinger.test.stu.outcomes.custom.ffld_workups module
- schrodinger.test.stu.outcomes.custom.glide module
- schrodinger.test.stu.outcomes.custom.jaguar module
- schrodinger.test.stu.outcomes.custom.perceptual_diff module
- schrodinger.test.stu.outcomes.custom.phase_workups module
- Submodules
- schrodinger.test.stu.outcomes.custom package
- Submodules
- schrodinger.test.stu.outcomes.compareDesmondSystems module
- schrodinger.test.stu.outcomes.compare_csv module
- schrodinger.test.stu.outcomes.confgen_workups module
- schrodinger.test.stu.outcomes.correlate_to_reference_file module
- schrodinger.test.stu.outcomes.correlate_workup module
- schrodinger.test.stu.outcomes.desmond_workups module
- schrodinger.test.stu.outcomes.failures module
- schrodinger.test.stu.outcomes.jaguar module
- schrodinger.test.stu.outcomes.job_status module
- schrodinger.test.stu.outcomes.prime_workups module
- schrodinger.test.stu.outcomes.smarts_check module
- schrodinger.test.stu.outcomes.standard_workups module
- schrodinger.test.stu.outcomes.structure_comparisons module
- Subpackages
- schrodinger.test.stu.workups package
- schrodinger.test.stu.outcomes package
- Submodules
- schrodinger.test.stu.base_executable module
- schrodinger.test.stu.client module
- schrodinger.test.stu.common module
- schrodinger.test.stu.constants module
- schrodinger.test.stu.get_pdbs module
- schrodinger.test.stu.joberrors module
- schrodinger.test.stu.process_management module
- schrodinger.test.stu.run module
- schrodinger.test.stu.sysinfo module
- schrodinger.test.stu.testscripts module
- schrodinger.test.stu.workup module
- Subpackages
- Submodules
- schrodinger.test.af2commontests module
- schrodinger.test.build_test_structures module
- schrodinger.test.canvas_utils module
- schrodinger.test.cluster_info module
- schrodinger.test.custom_assertions module
- schrodinger.test.custom_test_classes module
- schrodinger.test.darwinconsole module
- schrodinger.test.decorate_fflag module
- schrodinger.test.fakejob module
- schrodinger.test.fixtures module
- schrodinger.test.get_widget_image module
- schrodinger.test.ioredirect module
- schrodinger.test.jobserver module
- schrodinger.test.ld_base_test_classes module
- schrodinger.test.ld_mock_modules module
- schrodinger.test.log_parser module
- schrodinger.test.memtest module
- schrodinger.test.mock_ld_client module
- schrodinger.test.mock_ld_models module
- schrodinger.test.perceptualdiff module
- schrodinger.test.project_mock module
- schrodinger.test.pytest_customizations module
- schrodinger.test.qt_utils module
- schrodinger.test.scival module
- schrodinger.test.structurecheck module
- schrodinger.test.test_markers module
- schrodinger.test.unittest_utils module
- schrodinger.test.warning_messages module
- Subpackages
- schrodinger.thirdparty package
- schrodinger.trajectory package
- Subpackages
- schrodinger.trajectory.prody package
- Submodules
- schrodinger.trajectory.prody.compare module
- schrodinger.trajectory.prody.crosscorrelation module
- schrodinger.trajectory.prody.ensemble module
- schrodinger.trajectory.prody.mode module
- schrodinger.trajectory.prody.modeset module
- schrodinger.trajectory.prody.nma module
- schrodinger.trajectory.prody.pca module
- schrodinger.trajectory.prody.test_arrow module
- schrodinger.trajectory.prody.writenmd module
- Submodules
- schrodinger.trajectory.trajectory_gui_dir namespace
- Submodules
- schrodinger.trajectory.trajectory_gui_dir.advanced_plot_ui module
- schrodinger.trajectory.trajectory_gui_dir.advanced_settings module
- schrodinger.trajectory.trajectory_gui_dir.advanced_settings_ui module
- schrodinger.trajectory.trajectory_gui_dir.banners module
- schrodinger.trajectory.trajectory_gui_dir.centroid_banner_ui module
- schrodinger.trajectory.trajectory_gui_dir.collapsible_plot_ui module
- schrodinger.trajectory.trajectory_gui_dir.display_settings_data module
- schrodinger.trajectory.trajectory_gui_dir.display_settings_manager module
- schrodinger.trajectory.trajectory_gui_dir.export_movie module
- schrodinger.trajectory.trajectory_gui_dir.export_movie_ui module
- schrodinger.trajectory.trajectory_gui_dir.export_snapshot_structures module
- schrodinger.trajectory.trajectory_gui_dir.export_snapshot_structures_ui module
- schrodinger.trajectory.trajectory_gui_dir.export_structure_enums module
- schrodinger.trajectory.trajectory_gui_dir.export_structures module
- schrodinger.trajectory.trajectory_gui_dir.export_structures_ui module
- schrodinger.trajectory.trajectory_gui_dir.frame_structure_exporter module
- schrodinger.trajectory.trajectory_gui_dir.icons_rc module
- schrodinger.trajectory.trajectory_gui_dir.planar_banner_ui module
- schrodinger.trajectory.trajectory_gui_dir.playback_settings module
- schrodinger.trajectory.trajectory_gui_dir.playback_settings_data module
- schrodinger.trajectory.trajectory_gui_dir.playback_settings_ui module
- schrodinger.trajectory.trajectory_gui_dir.playertoolbar module
- schrodinger.trajectory.trajectory_gui_dir.plots module
- schrodinger.trajectory.trajectory_gui_dir.rmsd_settings_dialog_ui module
- schrodinger.trajectory.trajectory_gui_dir.secondary_structure_data module
- schrodinger.trajectory.trajectory_gui_dir.shortcut_ui module
- schrodinger.trajectory.trajectory_gui_dir.snapshot_custom_display_settings module
- schrodinger.trajectory.trajectory_gui_dir.snapshot_custom_display_settings_ui module
- schrodinger.trajectory.trajectory_gui_dir.snapshot_panel module
- schrodinger.trajectory.trajectory_gui_dir.snapshot_panel_ui module
- schrodinger.trajectory.trajectory_gui_dir.stylesheet module
- schrodinger.trajectory.trajectory_gui_dir.traj_plot_gui module
- schrodinger.trajectory.trajectory_gui_dir.traj_plot_models module
- schrodinger.trajectory.trajectory_gui_dir.traj_plot_ui module
- schrodinger.trajectory.trajectory_gui_dir.traj_plot_widgets module
- schrodinger.trajectory.trajectory_gui_dir.trajectory_messages module
- Submodules
- schrodinger.trajectory.prody package
- Submodules
- Subpackages
- schrodinger.ui package
- Subpackages
- schrodinger.ui.picking_dir package
- schrodinger.ui.qt package
- Subpackages
- schrodinger.ui.qt.appframework2 package
- Submodules
- schrodinger.ui.qt.appframework2.af2 module
- schrodinger.ui.qt.appframework2.af2_template module
- schrodinger.ui.qt.appframework2.application module
- schrodinger.ui.qt.appframework2.appmethods module
- schrodinger.ui.qt.appframework2.baseapp module
- schrodinger.ui.qt.appframework2.debug module
- schrodinger.ui.qt.appframework2.debug_gui module
- schrodinger.ui.qt.appframework2.debug_gui_ui module
- schrodinger.ui.qt.appframework2.debugcore module
- schrodinger.ui.qt.appframework2.debugwidgets module
- schrodinger.ui.qt.appframework2.jobnames module
- schrodinger.ui.qt.appframework2.jobs module
- schrodinger.ui.qt.appframework2.jobwidgets module
- schrodinger.ui.qt.appframework2.knime_af2 module
- schrodinger.ui.qt.appframework2.maestro_callback module
- schrodinger.ui.qt.appframework2.markers module
- schrodinger.ui.qt.appframework2.settings module
- schrodinger.ui.qt.appframework2.tasks module
- schrodinger.ui.qt.appframework2.taskwidgets module
- schrodinger.ui.qt.appframework2.validation module
- schrodinger.ui.qt.appframework2.validators module
- schrodinger.ui.qt.appframework2.wizards module
- Submodules
- schrodinger.ui.qt.dialbox_dir package
- schrodinger.ui.qt.filter_dialog_dir package
- schrodinger.ui.qt.mapperwidgets package
- schrodinger.ui.qt.presets namespace
- schrodinger.ui.qt.standard package
- schrodinger.ui.qt.standard_widgets namespace
- schrodinger.ui.qt.tasks package
- Submodules
- schrodinger.ui.qt.tasks.config_dialog_ui module
- schrodinger.ui.qt.tasks.config_info_ui module
- schrodinger.ui.qt.tasks.configwidgets module
- schrodinger.ui.qt.tasks.taskbar2 module
- schrodinger.ui.qt.tasks.taskbar_ui module
- schrodinger.ui.qt.tasks.taskbarwidgets module
- schrodinger.ui.qt.tasks.taskwidgets module
- Submodules
- schrodinger.ui.qt.widgetmixins package
- schrodinger.ui.qt.appframework2 package
- Submodules
- schrodinger.ui.qt.appframework module
- schrodinger.ui.qt.atom_weights_table_ui module
- schrodinger.ui.qt.atom_weights_table_widget module
- schrodinger.ui.qt.atomselector module
- schrodinger.ui.qt.basewidgets module
- schrodinger.ui.qt.borderless_popup_ui module
- schrodinger.ui.qt.color_picker module
- schrodinger.ui.qt.config_dialog module
- schrodinger.ui.qt.config_dialog_open_mp_ui module
- schrodinger.ui.qt.config_dialog_queue_ui module
- schrodinger.ui.qt.datamapper module
- schrodinger.ui.qt.decorators module
- schrodinger.ui.qt.delegates module
- schrodinger.ui.qt.dendrogram module
- schrodinger.ui.qt.dialbox module
- schrodinger.ui.qt.directory_selector module
- schrodinger.ui.qt.entryselector module
- schrodinger.ui.qt.entryselector_ui module
- schrodinger.ui.qt.figureoptions module
- schrodinger.ui.qt.file_selector module
- schrodinger.ui.qt.filedialog module
- schrodinger.ui.qt.filter_dialog module
- schrodinger.ui.qt.filter_dialog_ui module
- schrodinger.ui.qt.filter_list module
- schrodinger.ui.qt.forcefield module
- schrodinger.ui.qt.fp_selector_widget module
- schrodinger.ui.qt.fp_selector_widget_ui module
- schrodinger.ui.qt.icons module
- schrodinger.ui.qt.icons_rc module
- schrodinger.ui.qt.input_selector module
- schrodinger.ui.qt.jobwidgets module
- schrodinger.ui.qt.label module
- schrodinger.ui.qt.label_cursor module
- schrodinger.ui.qt.layout module
- schrodinger.ui.qt.ligand_list module
- schrodinger.ui.qt.matplot_widget module
- schrodinger.ui.qt.messagebox module
- schrodinger.ui.qt.multi_combo_box module
- schrodinger.ui.qt.navtoolbar module
- schrodinger.ui.qt.network_views module
- schrodinger.ui.qt.network_visualizer module
- schrodinger.ui.qt.pdb_dialog module
- schrodinger.ui.qt.pdb_dialog_ui module
- schrodinger.ui.qt.periodictable module
- schrodinger.ui.qt.pop_up_widgets module
- schrodinger.ui.qt.propertyselector module
- schrodinger.ui.qt.protein_health_viewer module
- schrodinger.ui.qt.protein_health_viewer_ui module
- schrodinger.ui.qt.rama module
- schrodinger.ui.qt.recent_completer module
- schrodinger.ui.qt.rename_favorite_dialog module
- schrodinger.ui.qt.rename_favorite_dialog_ui module
- schrodinger.ui.qt.schart module
- schrodinger.ui.qt.schrodinger_ipython module
- schrodinger.ui.qt.schrodingerstyle module
- schrodinger.ui.qt.select_residues_dialog module
- schrodinger.ui.qt.select_residues_dialog_ui module
- schrodinger.ui.qt.smatplotlib module
- schrodinger.ui.qt.structtable module
- schrodinger.ui.qt.structure2d module
- schrodinger.ui.qt.structure_selector module
- schrodinger.ui.qt.style module
- schrodinger.ui.qt.stylesheet module
- schrodinger.ui.qt.swidgets module
- schrodinger.ui.qt.table module
- schrodinger.ui.qt.table_helper module
- schrodinger.ui.qt.table_speed_up module
- schrodinger.ui.qt.tablewidget module
- schrodinger.ui.qt.tooltips module
- schrodinger.ui.qt.utils module
- schrodinger.ui.qt.xsignals module
- Subpackages
- schrodinger.ui.sequencealignment package
- Submodules
- schrodinger.ui.sequencealignment.align module
- schrodinger.ui.sequencealignment.align_gui module
- schrodinger.ui.sequencealignment.analyze_gui module
- schrodinger.ui.sequencealignment.associate_gui module
- schrodinger.ui.sequencealignment.blast_gui module
- schrodinger.ui.sequencealignment.compare_sequences_gui module
- schrodinger.ui.sequencealignment.compare_sequences_ui module
- schrodinger.ui.sequencealignment.constants module
- schrodinger.ui.sequencealignment.contact_map module
- schrodinger.ui.sequencealignment.dialogs module
- schrodinger.ui.sequencealignment.fileio module
- schrodinger.ui.sequencealignment.find_gui module
- schrodinger.ui.sequencealignment.globals module
- schrodinger.ui.sequencealignment.jobs module
- schrodinger.ui.sequencealignment.jobs_gui module
- schrodinger.ui.sequencealignment.maestro module
- schrodinger.ui.sequencealignment.msv_menu module
- schrodinger.ui.sequencealignment.name_area module
- schrodinger.ui.sequencealignment.predictors module
- schrodinger.ui.sequencealignment.prime module
- schrodinger.ui.sequencealignment.prime_gui module
- schrodinger.ui.sequencealignment.residue module
- schrodinger.ui.sequencealignment.sequence module
- schrodinger.ui.sequencealignment.sequence_area module
- schrodinger.ui.sequencealignment.sequence_group module
- schrodinger.ui.sequencealignment.sequence_viewer module
- schrodinger.ui.sequencealignment.sequence_viewer_gui module
- schrodinger.ui.sequencealignment.sequencealignment_rc module
- schrodinger.ui.sequencealignment.structure_utils module
- schrodinger.ui.sequencealignment.tree_area module
- schrodinger.ui.sequencealignment.tree_node module
- schrodinger.ui.sequencealignment.undo module
- schrodinger.ui.sequencealignment.utils module
- schrodinger.ui.sequencealignment.viewer module
- Submodules
- Submodules
- schrodinger.ui.chooseligand module
- schrodinger.ui.dendrogram module
- schrodinger.ui.images_rc module
- schrodinger.ui.ligfilter module
- schrodinger.ui.ligfilter_definition_dialog_ui module
- schrodinger.ui.ligfilter_ui module
- schrodinger.ui.maestro_ui module
- schrodinger.ui.picking module
- schrodinger.ui.residueselector module
- schrodinger.ui.sketcher module
- Subpackages
- schrodinger.utils package
- Subpackages
- Submodules
- schrodinger.utils.cgxutils module
- schrodinger.utils.cmdline module
- schrodinger.utils.colorscheme module
- schrodinger.utils.config module
- schrodinger.utils.csv_unicode module
- schrodinger.utils.deprecation module
- schrodinger.utils.documentation module
- schrodinger.utils.env module
- schrodinger.utils.fileutils module
- schrodinger.utils.funcchains module
- schrodinger.utils.funcgroups module
- schrodinger.utils.future module
- schrodinger.utils.imputils module
- schrodinger.utils.install_scripts module
- schrodinger.utils.installation_check module
- schrodinger.utils.license module
- schrodinger.utils.ligfilter module
- schrodinger.utils.log module
- schrodinger.utils.machid module
- schrodinger.utils.maestro_scripts_path module
- schrodinger.utils.mmutil module
- schrodinger.utils.moduleproxy module
- schrodinger.utils.multifpfile module
- schrodinger.utils.openmpi module
- schrodinger.utils.pandasutils module
- schrodinger.utils.platform module
- schrodinger.utils.postinstall module
- schrodinger.utils.preferences module
- schrodinger.utils.profiling module
- schrodinger.utils.pymol module
- schrodinger.utils.qt_utils module
- schrodinger.utils.scollections module
- schrodinger.utils.singledashoptionparser module
- schrodinger.utils.sshconfig module
- schrodinger.utils.subproc module
- schrodinger.utils.subprocess module
- schrodinger.utils.sysinfo module
- schrodinger.utils.thread_utils module
- schrodinger.utils.units module
- schrodinger.utils.withnone module