Trees
Indices
Help
2015-2Schrodinger Python API
[
hide private
]
[
frames
] |
no frames
]
[
Identifiers
|
To Do
|
Deprecations
]
Identifier Index
[
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
_
]
H
H_AR
(in
schrodinger.application.matsci.basiselements
)
HEADERS
(in
ActiveDatabaseTable
)
histogram
(in
StatisticalSummary
)
H_BI_NO_LANTH
(in
schrodinger.application.matsci.basiselements
)
HEADERS
(in
SelectedEntriesColumns
)
HKL_VALUE
(in
schrodinger.application.matsci.nano.particle
)
H_BOND_TO_BACKBONE()
(in
sketcherStyle
)
HEADERS
(in
SelectedEntriesColumnsHB
)
HOH_angle
(in
changeable
)
H_BOND_TO_SIDE_CHAIN()
(in
sketcherStyle
)
HEADERS
(in
SelectedEntriesColumnsPka
)
HOLE_REORG
(in
schrodinger.application.matsci.optoelectronics
)
H_INDEX_DEFAULT
(in
schrodinger.application.matsci.nano.slab
)
HEADERS
(in
BasisSetColumns
)
HOME
(in
CONST
)
HALFREVOLUTION
(in
ReactionCoords
)
HEADERS
(in
ChargeConstraintsColumns
)
HOME
(in
schrodinger.utils.fileutils
)
HALOGEN_ACCEPTOR
(in
_structure'
)
HeaderStyle
(in
schrodinger.application.desmond.report_helper
)
homo()
(in
schrodinger.application.jaguar.output
)
HALOGEN_ACCEPTOR
(in
schrodinger.infra.structure
)
headerToEnv()
(in
schrodinger.application.desmond.enhsamp
)
homo_prop
(in
MopacResults71
)
HALOGEN_DONOR
(in
_structure'
)
HeaderWriter
(in
schrodinger.application.jaguar.make_headers_mod
)
HomologyRama
(in
schrodinger.application.bioluminate.protein_structure_quality
)
HALOGEN_DONOR
(in
schrodinger.infra.structure
)
health()
(in
LicenseResource
)
HoneycombBilayers
(in
schrodinger.application.matsci.nano.sheet
)
handle_check_action()
(in
schrodinger.application.licensing.licadmin
)
healthier()
(in
schrodinger.application.licensing.licadmin
)
HoneycombCell
(in
schrodinger.application.matsci.nano.sheet
)
handle_diag_action()
(in
schrodinger.application.licensing.licadmin
)
HEAVY
(in
FullColumns
)
HoneycombLattice
(in
schrodinger.application.matsci.nano.sheet
)
handle_generic_action()
(in
schrodinger.application.licensing.licadmin
)
heavy_atom_num_cond()
(in
schrodinger.application.desmond.fep_mapping
)
HoneycombUnitCell
(in
schrodinger.application.matsci.nano.sheet
)
handle_info_action()
(in
schrodinger.application.licensing.licadmin
)
HEAVY_ATOM_NUM_THERESHOLD
(in
schrodinger.application.desmond.fep_mapping
)
hook_captured_successful_job()
(in
StageBase
)
handle_jobcontrol_message()
(in
Engine
)
HEAVY_FR_IDEN
(in
FullColumns
)
hook_captured_successful_job()
(in
AlignCore
)
handle_list_action()
(in
schrodinger.application.licensing.licadmin
)
HEAVY_FR_SIM
(in
FullColumns
)
hook_captured_successful_job()
(in
Analysis
)
handle_request()
(in
GlideHTTPServer
)
HEAVY_IDEN
(in
FullColumns
)
hook_captured_successful_job()
(in
AssignForcefield
)
handle_start_action()
(in
schrodinger.application.licensing.licadmin
)
HEAVY_SIM
(in
FullColumns
)
hook_captured_successful_job()
(in
BuildGeometry
)
handle_stat_action()
(in
schrodinger.application.licensing.licadmin
)
height()
(in
Node
)
hook_captured_successful_job()
(in
FepAnalysis
)
handle_stop_action()
(in
schrodinger.application.licensing.licadmin
)
HELIX
(in
FEPEdgeReportMaker
)
hook_captured_successful_job()
(in
FepAnalysis2
)
handle_timeout()
(in
GlideHTTPServer
)
helix
(in
schrodinger.protein
)
hook_captured_successful_job()
(in
FepVrun
)
handle_ver_action()
(in
schrodinger.application.licensing.licadmin
)
HELIX
(in
SecondaryStructure
)
hook_captured_successful_job()
(in
ForcefieldBuilder
)
handle_verify_action()
(in
schrodinger.application.licensing.licadmin
)
HELIX_COLOR
(in
FEPEdgeReportMaker
)
hook_captured_successful_job()
(in
LambdaHopping
)
handleManyToOne()
(in
Nanoparticle
)
Help
(in
schrodinger.application.desmond.multisimstartup
)
hook_captured_successful_job()
(in
MatSciAnalysis
)
handleMetalBonding()
(in
Products
)
Help
(in
schrodinger.application.desmond.starter.ui.multisim
)
hook_captured_successful_job()
(in
PLAnalysis
)
handleObsolete()
(in
Code
)
HELP
(in
ConfigDialog
)
hook_captured_successful_job()
(in
ReplicaExchange
)
handleOneToMany()
(in
Nanoparticle
)
help()
(in
ProteinStructureQualityViewer
)
hook_captured_successful_job()
(in
Simulate
)
handlePBCBonding()
(in
Crystal
)
help()
(in
SimpleEnumDockPanel
)
hook_captured_successful_job()
(in
SolvatePocket
)
handleProps()
(in
MultiWalledNanoTube
)
help()
(in
EditDialog
)
hook_captured_successful_job()
(in
SystemBuilder
)
handleProps()
(in
NanoTube
)
help()
(in
SolventDialog
)
hook_captured_successful_job()
(in
WaterMap
)
handler
(in
schrodinger.infra.exception_handler
)
help()
(in
ReorderAtomsDialog
)
hook_captured_successful_job()
(in
WaterMapCluster
)
handler
(in
schrodinger.job.hunt_stub
)
help()
(in
schrodinger.test.stu.outcomes.compare_csv'
)
hook_captured_successful_job()
(in
WaterMapPostAnalysis
)
handler
(in
schrodinger.job.remote_command
)
help()
(in
AppFramework
)
HOPPING_REACTION_ENERGY
(in
schrodinger.application.matsci.property_names
)
handler
(in
schrodinger.pipeline.stage
)
HELP_BUTTON_HEIGHT
(in
schrodinger.ui.qt.appframework
)
HorizontalBar
(in
schrodinger.application.desmond.fep_gui
)
handleSettings()
(in
Crystal
)
help_dialog()
(in
schrodinger.ui.qt.appframework
)
HorizontalBar
(in
schrodinger.application.desmond.gui
)
handleStageMessages()
(in
Pipeline
)
HELP_DITTY
(in
schrodinger.application.matsci.reordergui
)
HorizontalBar
(in
schrodinger.ui.widget.tkinterwidget
)
handshake()
(in
DebugEventSocketProxy
)
HELP_TOPIC
(in
BaseTab
)
HOST
(in
schrodinger.application.desmond.starter.ui.cmdline
)
hardness_prop
(in
MopacResults71
)
HELP_TOPIC
(in
InputTab
)
Host
(in
schrodinger.job.jobcontrol
)
HARTREE_TO_EV
(in
schrodinger.application.matsci.jaguarworkflows
)
HELP_TOPIC
(in
InputTabHB
)
host
(in
Host
)
HARTREE_TO_KCAL
(in
schrodinger.application.matsci.jaguarworkflows
)
HELP_TOPIC
(in
InputTabPka
)
HOST
(in
schrodinger.test.performance.reporter
)
has_chorus_box_props()
(in
schrodinger.application.matsci.desmondutils
)
HELP_TOPIC
(in
IrcTab
)
host
(in
_SysInfo
)
has_closed_shell_organic_molecule()
(in
schrodinger.application.matsci.nano.xtal
)
HELP_TOPIC
(in
MoleculeTabBase
)
Host
(in
schrodinger.ui.qt.appframework
)
has_crystal_builder_pbc_props()
(in
schrodinger.application.matsci.desmondutils
)
HELP_TOPIC
(in
OptimizationTab
)
HOST
(in
schrodinger.utils.cmdline
)
has_fepio()
(in
schrodinger.application.desmond.cms
)
HELP_TOPIC
(in
OutputTab
)
host_and_cpu_args()
(in
schrodinger.application.jaguar.gui.utils
)
has_fepio()
(in
schrodinger.application.desmond.mdkey
)
HELP_TOPIC
(in
PropertiesTabBase
)
host_check
(in
schrodinger.job
)
has_ffio()
(in
schrodinger.application.desmond.cms
)
HELP_TOPIC
(in
ReactionMoleculesTab
)
host_check()
(in
schrodinger.job.host_check
)
has_key()
(in
PairDict
)
HELP_TOPIC
(in
ReactionPropertiesTab
)
host_information()
(in
schrodinger.test.performance.reporter
)
has_key()
(in
property_dict
)
HELP_TOPIC
(in
ReactionTab
)
host_list_to_str()
(in
schrodinger.job.jobcontrol
)
has_key()
(in
PropertyDictionary
)
HELP_TOPIC
(in
ScanTab
)
host_str_to_list()
(in
schrodinger.job.jobcontrol
)
has_key()
(in
Map
)
HELP_TOPIC
(in
ScfTab
)
hostAndCpuArgs()
(in
BaseJaguarPanel
)
has_mmffio()
(in
schrodinger.application.desmond.mdkey
)
HELP_TOPIC
(in
SolventTab
)
HostEntry
(in
schrodinger.job.hunt_stub
)
has_option()
(in
SingleDashOptionParser
)
HELP_TOPIC
(in
TheoryTab
)
hostid()
(in
schrodinger.application.licensing.licadmin
)
has_organic_molecule()
(in
schrodinger.application.matsci.nano.xtal
)
HELP_TOPIC
(in
TransitionStateTab
)
hostid_is_local()
(in
schrodinger.application.licensing.licadmin
)
has_phasedb_ending()
(in
schrodinger.ui.qt.filedialog
)
Helper
(in
_FepSchedule
)
hostid_order()
(in
schrodinger.application.licensing.flexlm
)
has_plugin()
(in
schrodinger.application.desmond.config
)
helpEvent()
(in
sketcherScene
)
HOSTLIST
(in
schrodinger.application.desmond.starter.ui.cmdline
)
has_plugin()
(in
schrodinger.application.desmond.mdkey
)
HelpLabel
(in
schrodinger.application.desmond.fep_gui
)
HOSTLIST
(in
schrodinger.utils.cmdline
)
has_project_ending()
(in
schrodinger.ui.qt.filedialog
)
helpNC()
(in
SimpleEnumDockPanel
)
hostModified()
(in
_SdSubjobFrame
)
has_rule()
(in
DesmondTyper
)
helpPressed()
(in
AdvOptionsFrame
)
hostname
(in
schrodinger.job.remote_command
)
has_rule()
(in
McproTyper
)
helpPressed()
(in
AddDefinitionDialog
)
hostport()
(in
Server
)
has_rule()
(in
TyperBase
)
hex_()
(in
schrodinger.ui.qt.structtable
)
HOSTS
(in
schrodinger.application.desmond.starter.ui.cmdline
)
has_rule()
(in
WatermapTyper
)
Hexagonal
(in
CrystalSystems
)
HOSTS
(in
schrodinger.utils.cmdline
)
has_space_group_pbc_props()
(in
schrodinger.application.matsci.desmondutils
)
HEXAGONAL_NAME
(in
CrystalSystems
)
HOSTS_FILE
(in
schrodinger.job.jobcontrol
)
has_tag()
(in
Sea
)
HFExcitedStateWidget
(in
schrodinger.application.jaguar.gui.theory_tab_widgets
)
hostType()
(in
Host
)
hasAcceptableInput()
(in
EntryField
)
HIDDEN
(in
BaseRecognizer
)
HOT_ATOMS_COLOR
(in
schrodinger.application.desmond.fep_scholar_util
)
hasAcceptableInput()
(in
BasisSelectorLineEdit
)
HIDDEN
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
HOTPINK
(in
schrodinger.application.bioluminate.pml_menus
)
hasAncestor()
(in
BaseTree
)
HIDDEN
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
HOTPINK
(in
schrodinger.application.matsci.amorphous
)
hasAncestor()
(in
Tree
)
HIDDEN_CHANNEL
(in
schrodinger.application.desmond.antlr3.constants
)
HOVER_CALLBACK
(in
schrodinger.maestro.maestro
)
hasBool()
(in
sketcherStyle
)
hide()
(in
_Step
)
hover_callback_add()
(in
schrodinger.maestro.maestro
)
hasChanged()
(in
ConnectionStorage
)
hide()
(in
NewEntry
)
hover_callback_remove()
(in
schrodinger.maestro.maestro
)
hasColor()
(in
sketcherStyle
)
hide()
(in
NewEntryGroup
)
hoverEnterEvent()
(in
sketcherAtom
)
hasCompleted()
(in
Stage
)
hide()
(in
GlideWorkspaceMarkers
)
hoverEnterEvent()
(in
sketcherBond
)
hasData()
(in
InteractionReader
)
hide()
(in
_DispOpt
)
hoverEnterEvent()
(in
sketcherGraphicalObject
)
hasEnoughHeavyAtoms()
(in
_StructureFragmenter
)
hide()
(in
Group
)
hoverEnterEvent()
(in
sketcherResidue
)
hasFepio()
(in
FFIOStructure
)
hide()
(in
Primitive
)
hoverEnterEvent()
(in
sketcherResidueInteraction
)
hasFfio()
(in
FFIOStructure
)
hide()
(in
GridBox
)
hoverLeaveEvent()
(in
sketcherAtom
)
hasFloat()
(in
sketcherStyle
)
hide()
(in
Marker
)
hoverLeaveEvent()
(in
sketcherBond
)
hasKeyword()
(in
StructureLauncher
)
hide()
(in
_BaseMarker
)
hoverLeaveEvent()
(in
sketcherGraphicalObject
)
hasMissingAtoms()
(in
_Residue
)
hide()
(in
Surface
)
hoverLeaveEvent()
(in
sketcherResidue
)
hasNearerImage()
(in
PBC
)
hide()
(in
_Cell
)
hoverLeaveEvent()
(in
sketcherResidueInteraction
)
hasNext()
(in
RewriteRuleElementStream
)
hide_all()
(in
_DispOpt
)
hoverMoveEvent()
(in
StructurePic
)
hasPBC()
(in
DistanceCell
)
hide_atoms()
(in
schrodinger.application.bioluminate.pml_menus
)
hoverMoveEvent()
(in
sketcherAtom
)
hasProperty()
(in
StructureAtom
)
hide_everything()
(in
schrodinger.application.bioluminate.pml_menus
)
hoverMoveEvent()
(in
sketcherBond
)
hasRingChirality()
(in
sketcherAtom
)
hide_labels()
(in
schrodinger.application.bioluminate.pml_menus
)
hoverMoveEvent()
(in
sketcherGraphicalObject
)
hasStarted()
(in
BaseJob
)
hide_n()
(in
_DispOpt
)
hoverMoveEvent()
(in
sketcherResidue
)
hasStarted()
(in
JobDJ
)
hide_object()
(in
schrodinger.maestro.maestro
)
hoverMoveEvent()
(in
sketcherResidueInteraction
)
hasStarted()
(in
Stage
)
hide_ribbons()
(in
schrodinger.application.bioluminate.pml_menus
)
html_embed_image()
(in
schrodinger.application.desmond.util
)
hasStereoChemistryShown()
(in
sketcherAtom
)
hide_surface()
(in
schrodinger.application.bioluminate.pml_menus
)
HTML_IMAGE_SCALE
(in
schrodinger.application.report2d
)
hasString()
(in
sketcherStyle
)
HideAllOthers
(in
schrodinger.application.bioluminate.pml_menus
)
http_client
(in
schrodinger.application.glide
)
hasStructure()
(in
JaguarInput
)
HideAtoms
(in
schrodinger.application.bioluminate.pml_menus
)
http_open()
(in
MyHTTPHandler
)
hasStructure()
(in
ItemRowWithTemplates
)
hideDialog()
(in
AdvOptionsFrame
)
http_server
(in
schrodinger.application.glide
)
hasUniqueNavigationNodes()
(in
CommonTreeNodeStream
)
hideEvent()
(in
JobInputFrame
)
HTTPClient
(in
schrodinger.application.glide.http_client
)
hasValidBasis()
(in
PerAtomBasisRow
)
hideEvent()
(in
sketcher
)
httpd
(in
schrodinger.application.glide.http_server
)
hasWidget()
(in
_MdcBase
)
hideEvent()
(in
sketcherGUIMultiColumnToolBar
)
https_open()
(in
HTTPSHandler
)
have_mmlibs()
(in
schrodinger.job.hunt_stub
)
hideEvent()
(in
sketcherView
)
https_open()
(in
MyHTTPSHandler
)
hb_buried_acceptor()
(in
ModelCheck
)
HideEverything
(in
schrodinger.application.bioluminate.pml_menus
)
HTTPSHandler
(in
schrodinger.utils.urllib
)
hb_buried_donor()
(in
ModelCheck
)
HideHydrogens
(in
schrodinger.application.bioluminate.pml_menus
)
HTVS
(in
schrodinger.application.glide.glide
)
hb_check_buried()
(in
ModelCheck
)
HideHydrogenSubMenu
(in
schrodinger.application.bioluminate.pml_menus
)
hunt()
(in
schrodinger.job.hunt_stub
)
hb_unsatis_water()
(in
ModelCheck
)
HideLabel
(in
schrodinger.application.bioluminate.pml_menus
)
hunt()
(in
schrodinger.job.util
)
HBOND_ACCEPTOR
(in
schrodinger.application.glide.glide
)
hideLabels()
(in
WorkspaceLabeler
)
hunt_cache
(in
schrodinger.job
)
hbond_cluster
(in
ProtAssign
)
hideLabels()
(in
GlideWorkspaceMarkers
)
hunt_stub
(in
schrodinger.job
)
hbond_da_type()
(in
ModelCheck
)
hideLigandHydrogens()
(in
sketcher
)
HuntCache
(in
schrodinger.job.hunt_cache
)
HBOND_DONOR
(in
schrodinger.application.glide.glide
)
HideMainChain
(in
schrodinger.application.bioluminate.pml_menus
)
HuntOptions
(in
schrodinger.job.hunt_stub
)
hbond_energy()
(in
schrodinger.application.qsite.output
)
HideMenu
(in
schrodinger.application.bioluminate.pml_menus
)
HYDRATION_SITE()
(in
sketcherStyle
)
hbond_heavy_max_angle
(in
changeable
)
HideNonBonded
(in
schrodinger.application.bioluminate.pml_menus
)
Hydrogen
(in
schrodinger.utils.sea
)
hbond_heavy_min_angle
(in
changeable
)
hidePanel()
(in
_App
)
HYDROGEN_BOND_ACCEPTOR
(in
StructuralInteractionFingerprintGenerator
)
hbond_min_angle
(in
changeable
)
HidePolarHydrogens
(in
schrodinger.application.bioluminate.pml_menus
)
HYDROGEN_BOND_DONOR
(in
StructuralInteractionFingerprintGenerator
)
hbox()
(in
schrodinger.ui.qt.layout
)
HideRibbons
(in
schrodinger.application.bioluminate.pml_menus
)
HYDROGEN_BOND_ORDER
(in
ReactantMolecule
)
HEADER
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
hideScheme()
(in
AntibodyNumberingToolBar
)
HYDROGEN_COLOR
(in
schrodinger.application.bioluminate.pml_menus
)
HEADER
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
HideSideChain
(in
schrodinger.application.bioluminate.pml_menus
)
HYDROGEN_GROUP
(in
schrodinger.application.canvas.r_group
)
header
(in
ScfIteration
)
HideSurface
(in
schrodinger.application.bioluminate.pml_menus
)
HYDROGEN_SYM
(in
ReactantMolecule
)
header()
(in
mexpParser
)
HideSymmetryMates
(in
schrodinger.application.bioluminate.pml_menus
)
HydrogenBondFinder
(in
schrodinger.trajectory.analysis
)
header()
(in
schrodinger.application.desmond.report_helper
)
HideWaters
(in
schrodinger.application.bioluminate.pml_menus
)
HydrogenBondTracker
(in
schrodinger.trajectory.analysis
)
header()
(in
Cut
)
HIERARCHICAL_PROJECT_TABLE
(in
_mmutil'
)
HydrogenCap
(in
schrodinger.application.qsite.input
)
header()
(in
HydrogenCap
)
HIERARCHICAL_PROJECT_TABLE
(in
schrodinger.utils.mmutil
)
HYDROGENS
(in
schrodinger.infra.mm
)
header_return
(in
mexpParser
)
hierarchy
(in
schrodinger.application.combiglide.packages
)
HydrogenSubMenu
(in
schrodinger.application.bioluminate.pml_menus
)
headerData()
(in
FrameworkModel
)
Hierarchy
(in
schrodinger.application.combiglide.packages.hierarchy
)
HYDROPATHY_SCALE
(in
schrodinger.application.bioluminate.protein
)
headerData()
(in
DataModel
)
high_temp
(in
schrodinger.application.desmond.predict_remd_temp
)
HYDROPHOBIC
(in
schrodinger.application.glide.glide
)
headerData()
(in
DataModelWithChart
)
HIGHEST_RX_MARKER_XVAL
(in
schrodinger.application.matsci.builderwidgets
)
HYDROPHOBIC_POS
(in
StructuralInteractionFingerprintGenerator
)
headerData()
(in
PathModel
)
highlight()
(in
CanvasCell
)
HYDROPHOBIC_RESIDUE
(in
StructuralInteractionFingerprintGenerator
)
headerData()
(in
ResiduesModel
)
highlight()
(in
CheckbuttonCell
)
HYDROPHOBIC_RESIDUE()
(in
sketcherStyle
)
headerData()
(in
StrucListModel
)
highlight()
(in
LabelCell
)
HYDROPHOBIC_RESIDUES
(in
StructuralInteractionFingerprintGenerator
)
headerData()
(in
AtomGroupModel
)
highlight()
(in
RadiobuttonCell
)
HydrophobicConstraint
(in
schrodinger.application.glide.glide
)
headerData()
(in
PosResModel
)
highlight()
(in
_Cell
)
hydrophobiccontactfinder
(in
schrodinger.trajectory
)
headerData()
(in
TableModel
)
highlight()
(in
_Row
)
HydrophobicContactFinder
(in
schrodinger.trajectory.hydrophobiccontactfinder
)
headerData()
(in
SelectedEntriesModel
)
highlightAtom()
(in
StructureFrame
)
hypo_exists()
(in
schrodinger.application.phase.hypothesis
)
headerData()
(in
CoordinatesModel
)
highlightAtom()
(in
StructurePic
)
hypot
(in
schrodinger.protein.assignment
)
headerData()
(in
SubTabModel
)
highlightCompAtom()
(in
ReorderAtomFrame
)
hypothesis
(in
schrodinger.application.phase
)
headerData()
(in
ChooseLigandModel
)
highlightMapPair()
(in
ReorderAtomFrame
)
Hypothesis
(in
schrodinger.application.phase.hypothesis
)
headerData()
(in
PatternModel
)
highlightRefAtom()
(in
ReorderAtomFrame
)
headerData()
(in
MultiHostTableModel
)
histidine_changeable
(in
ProtAssign
)
Trees
Indices
Help
2015-2Schrodinger Python API
Generated by Epydoc 3.0.1 on Sat May 9 06:30:26 2015
http://epydoc.sourceforge.net