Package schrodinger :: Package application :: Package desmond :: Module stage :: Class TimeSeriesAnalysisJob

Class TimeSeriesAnalysisJob

object --+        
         |        
   cmj.Job --+    
             |    
   AnalysisJob --+
                 |
                TimeSeriesAnalysisJob

Nested Classes

[hide private]

Inherited from cmj.Job: Time

Instance Methods

[hide private]

__init__(self, time_series, prob_profile, *arg, **kwarg)
x.__init__(...) initializes x; see help(type(x)) for signature

_get_requestname(self, request)

_get_title(self, request)

run(self)

Inherited from AnalysisJob: __getstate__

Inherited from cmj.Job: __deepcopy__, __setstate__, __str__, describe, finish, launch, update

Inherited from cmj.Job (private): _host_str, _log, _print

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __subclasshook__

Static Methods

[hide private]

Inherited from cmj.Job: get_time

Inherited from cmj.Job (private): _get_time_helper

Class Variables

[hide private]

Y_MARKER = {"distance":("dist (A)", "diamond", "grey", "black"...

TS_NAME = {"distance": "dist(t)", "angle": "angle(t)", "dihedr...

PR_NAME = {"distance": "P(dist)", "angle": "P(angle)", "dihedr...

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, time_series, prob_profile, *arg, **kwarg)
(Constructor)

x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__

run(self)

Overrides: AnalysisJob.run

Class Variable Details

[hide private]

Y_MARKER

Value:

{"distance":("dist (A)", "diamond", "grey", "black"), "angle":("angle 
(deg)", "x", "purple", "red"), "dihedral":("dihe (deg)", "circle", "sk
yblue", "blue"),}

TS_NAME

Value:

{"distance": "dist(t)", "angle": "angle(t)", "dihedral": "dihe(t)",}

PR_NAME

Value:

{"distance": "P(dist)", "angle": "P(angle)", "dihedral": "P(dihe)",}

Class TimeSeriesAnalysisJob

__init__(self, time_series, prob_profile, *arg, **kwarg) (Constructor)

run(self)

Y_MARKER

TS_NAME

PR_NAME

init(self, time_series, prob_profile, *arg, **kwarg)
(Constructor)