Package schrodinger :: Package application :: Package matsci :: Module reordergui :: Class StructurePic

Class StructurePic

   PyQt4.QtGui.QGraphicsItem --+    
                               |    
ui.qt.structure2d.structure_item --+
                                   |
                                  StructurePic

The QGraphicsItem that holds a 2D image of a structure

Instance Methods

[hide private]

__init__(self, scene)
Create a StructurePic instance

reset(self)
Clear all the annotators and remove the picture

hoverMoveEvent(self, event)
Track when the mouse is over an atom - emit a signal when it enters a new atom or leaves an atom.

setStructure(self, struct)
Set the structure - create a new image of it

selectAtom(self, index)
Select an atom in the image and regenerate the picture

markAtomMapped(self, index, guess=False)
Mark an atom as mapped (either by guess or manually) and regenerate the picture.

markAtomUnmapped(self, index)
Mark an atom as unmapped and regenerate the picture.

highlightAtom(self, index, guess=False)
Highlight an atom

Inherited from ui.qt.structure2d.structure_item: add_annotator, add_annotator_function_return, boundingRect, clear, clear_annotators, generate_picture, getBondAtLocation, mousePressEvent, paint, set_colormap, set_rect, set_structure, set_text

Method Details

[hide private]

init(self, scene)
(Constructor)

Create a StructurePic instance

Parameters:

scene (QGraphicsScene) - The Scene this image is placed in

Overrides: ui.qt.structure2d.structure_item.__init__

hoverMoveEvent(self, event)

Track when the mouse is over an atom - emit a signal when it enters a new atom or leaves an atom. An index of 0 is emitted when the mouse is not over any atom.

setStructure(self, struct)

Set the structure - create a new image of it

Parameters:

struct (schrodinger.structure.Structure) - The structure object for this picture

selectAtom(self, index)

Select an atom in the image and regenerate the picture

Parameters:

index (int) - The atom index to select

markAtomMapped(self, index, guess=False)

Mark an atom as mapped (either by guess or manually) and regenerate the picture.

Parameters:

index (int) - The atom index to mark
guess (bool) - True if this mark results from a guess, False if not. The background color used depends on this parameter.

markAtomUnmapped(self, index)

Mark an atom as unmapped and regenerate the picture.

Parameters:

index (int) - The atom index to mark

highlightAtom(self, index, guess=False)

Highlight an atom

Parameters:

index (int) - The atom index to highlight
guess (bool) - True if this atom is marked by a guess, False if it was marked by the user. The background color used depends on this parameter.

Class StructurePic

__init__(self, scene) (Constructor)

hoverMoveEvent(self, event)

setStructure(self, struct)

selectAtom(self, index)

markAtomMapped(self, index, guess=False)

markAtomUnmapped(self, index)

highlightAtom(self, index, guess=False)

init(self, scene)
(Constructor)