schrodinger.maestro.markers.Marker

Class Marker

object --+ | Marker

Class to manipulate a set of markers in the Workspace by ASLs. The only parameter that can be controlled is the color of the marker.

This marker is useful for showing a picked ligand or residue, for example.

Instance Methods

[hide private]

__init__(self, name=None, asl="NOT all", color=(1,1,1))
Create a Marker object

hide(self)
Hide the markers

show(self, asl=None)
Show the markers.

setVisible(self, show)
Show the marker if <show> is True; hide otherwise.

setAsl(self, asl)
Update the ASL of this marker to the given string, without affecting the visibility of it.

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties

[hide private]

Inherited from object: __class__

init(self, name=None, asl="NOT all", color=(1,1,1))
(Constructor)

Create a Marker object

Parameters:

name (str) - The name of the marker group. Used for unique identification of the marker within Maestro. By default a unique string identifier is generated.
asl (str) - The ASL defining which atoms should be marked. By default no atoms are marked.
red - The amount of red, green, and blue to use, each ranging from 0.0 to 1.0. Default is white (1, 1, 1).
color (tuple of 3 floats)

Overrides: object.__init__

show(self, asl=None)

Show the markers. If a new ASL is shown, then the previous markers get cleared and the new atoms are marked.

Parameters:

asl (str) - The ASL defining which atoms should be marked. This replaces any previous ASL marked by this Marker instance.

setVisible(self, show)

Show the marker if <show> is True; hide otherwise. Useful for hooking up to a slot of a QCheckBox.

Class Marker

__init__(self, name=None, asl="NOT all", color=(1,1,1)) (Constructor)

show(self, asl=None)

setVisible(self, show)

init(self, name=None, asl="NOT all", color=(1,1,1))
(Constructor)