Package schrodinger :: Package application :: Package jaguar :: Package gui :: Module base_panel :: Class MultiStructurePanel

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Class MultiStructurePanel

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                                                                AutomaticJobnameMixin --+
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                                                              MarkerMixin --+           |
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                                                        CoordinateMarkerMixin --+       |
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                                                       OptimizationTabMarkerMixin --+   |
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                                                                       object --+   |   |
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                                                              MultiStructureMixin --+   |
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                                                       MultiStructurePanelMarkerMixin --+
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                                                              StandardStatusMixin --+   |
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                                                                    ReadEditMixin --+   |
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                                                               NoInputTabJobMixin --+   |
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ui.qt.appframework2.maestro_callback.AbstractMaestroCallbackMixin --+               |   |
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            ui.qt.appframework2.maestro_callback.MaestroCallbackMixin --+           |   |
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                              ui.qt.appframework2.markers.MarkerMixin --+           |   |
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                           ui.qt.appframework2.settings.SettingsMixin --+           |   |
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                                sip.simplewrapper --+                   |           |   |
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                                 PyQt4.QtGui.QPaintDevice --+           |           |   |
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                                          PyQt4.QtGui.QWidget --+       |           |   |
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                            ui.qt.appframework2.baseapp.BasePanel --+   |           |   |
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                   ui.qt.appframework2.validation.ValidationMixin --+   |           |   |
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                           ui.qt.appframework2.baseapp.ValidatedPanel --+           |   |
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                                              ui.qt.appframework2.af2.App --+       |   |
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                                               ui.qt.appframework2.af2.JobApp --+   |   |
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                                                                  BaseJaguarPanel --+   |
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                                                              StandardPanelNoInputTab --+
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                                                                                       MultiStructurePanel

A convenience class for standard Jaguar panels that use a MultiStructureTab.

Nested Classes

[hide private]

Inherited from PyQt4.QtGui.QWidget: RenderFlag, RenderFlags

Inherited from PyQt4.QtGui.QPaintDevice: PaintDeviceMetric

Instance Methods

[hide private]

Inherited from AutomaticJobnameMixin: jobnameData, setPanelOptions, setup

Inherited from MultiStructurePanelMarkerMixin: clearConstraintsIfMultiStrucTab, clearConstraintsIfProject

Inherited from MultiStructurePanelMarkerMixin (private): _clearConstraintsStructureCheck, _connectInputTabSignals, _getAtomTotals

Inherited from OptimizationTabMarkerMixin (private): _markerSettings

Inherited from CoordinateMarkerMixin: clearConstraintsIfWorkspace, layOut, stopPicking

Inherited from CoordinateMarkerMixin (private): _addCoordMarker, _addHighlighting, _applyMarkerSettings, _connectMarkerSignals, _deleteCoordMarker, _getAtomsFromInts, _getJaguarMarkerSettings, _getSelectedEidsAndLength, _optMarkerSettings, _removeHighlighting, _scanMarkerSettings, _setAcceptableConstraintEids

Inherited from MarkerMixin: showAllJaguarMarkers

Inherited from MultiStructureMixin: editInput, projectUpdated, useParallelArg

Inherited from MultiStructureMixin (private): _addStructureToMmJag, _loadStrucFromMmJag

Inherited from StandardStatusMixin: __init__, generateJaguarStatus

Inherited from PropertiesMixin: updatePropertiesTab

Inherited from ReadEditMixin: jagInputEdited, read, restorePreviouslyIncludedEntry, runEditedInput

Inherited from ReadEditMixin (private): _catchLoadSettingsWarnings, _getIncludedEntryId, _getPreviousEidAndTitle, _launchReadInputFilesPanel, _loadSettingsWithEditDialogWarnings, _loadSettingsWithReadWarnings, _mergeWarnings

Inherited from NoInputTabJobMixin: start, updateAndCheckMmJag

Inherited from BaseJaguarPanel: createCmd, generateStatus, getConfigDialog, getMmJagKeywords, getNumStructures, getTab, jobnameArg, launchJaguarJob, reset, runTabValidation

Inherited from BaseJaguarPanel (private): _clearFreezeProperties, _clearPerAtomSettings, _createDefaultJagInput, _getAllJagSettings, _getPerAtomSettings, _help, _loadSettings, _loadSettingsWithErrors, _resetWarning, _runPreflight, _updateMmJag

Inherited from ui.qt.appframework2.af2.JobApp: cleanup, cleanupWriteCmd, closeEvent, cmdListToCmd, configDialogSettings, createBottomBar, createJobDir, getCmdListArgValue, jobDir, jobname, jobnameDataChanged, lastJobCompleted, launchJobCmd, launchLauncher, launchScript, launcherToCmdList, makeLauncher, registerJob, runMaestro, sanitizeJobnameText, setConfigDialogSettings, setDefaults, setJobname, setupJobCmd, showSTUDialog, syncConfigDialog, updateJobname, updateStatusBar, writeJobCmd

Inherited from ui.qt.appframework2.af2.JobApp (private): _addCmdParam, _formJaguarCPUFlags, _getSHFilename, _getSTUZIPFilename, _getStandardJobnames, _makeLocaleIndependent, _periodicJobCheck, _populateEmptyJobname, _settings, _start, _startOrWrite, _write, _writeSTU

Inherited from ui.qt.appframework2.af2.App: addMainTaskRunner, createInputSelector, definePanelSettings, getPanelState, getWorkspaceStructure, loadPanelState, processSettings, processTaskMessage, setCurrentTask, setPanelState, setupTaskRunner, showEvent, showProgressBarForJob, writePanelState

Inherited from ui.qt.appframework2.af2.App (private): _applySettingsFromGroup, _close, _configurePanelSettings, _getSettingsForGroup, _prestart, _prewrite, _read, _reset, _statusShrunk, _updateProgressBar

Inherited from ui.qt.appframework2.maestro_callback.AbstractMaestroCallbackMixin: buildCallbackDicts

Inherited from ui.qt.appframework2.maestro_callback.AbstractMaestroCallbackMixin (private): _addCallbacks, _closeEvent, _delayedCallbacks, _removeCallbacks, _showEvent

Inherited from ui.qt.appframework2.markers.MarkerMixin: addJaguarMarker, addMarker, getAllJaguarMarkers, getAllMarkers, getJaguarMarker, hideAllJaguarMarkers, hideAllMarkers, removeAllJaguarMarkers, removeAllJaguarMarkersForEntry, removeAllMarkers, removeJaguarMarker, removeJaguarMarkerForAtoms, removeMarker, showAllMarkers

Inherited from ui.qt.appframework2.markers.MarkerMixin (private): _calcEntryAtomTotal, _canonicalizeAtomOrder, _clearInvalidatedJaguarMarkers, _createAtomAsl, _createJaguarMarker, _createMarker, _eidsFromHashable, _genMarkerHash, _setMarkerHash, _updateMarkers

Inherited from ui.qt.appframework2.settings.SettingsMixin: __getitem__, __setitem__, applyAliasedSettings, applySettings, getAliasedSettings, getAliasedValue, getObjValue, getSettings, setAlias, setAliasedValue, setAliases, setObjValue

Inherited from ui.qt.appframework2.baseapp.ValidatedPanel: reportValidation

Inherited from ui.qt.appframework2.baseapp.BasePanel: __str__, error, getOpenFileName, getOpenFileNames, info, keyPressEvent, parent, question, restoreCursor, run, runCanvas, runMode, runStandalone, runSubpanel, setWaitCursor, startUp, warning

Inherited from ui.qt.appframework2.baseapp.BasePanel (private): _layOutDockWidget

Inherited from PyQt4.QtGui.QWidget: acceptDrops, accessibleDescription, accessibleName, actionEvent, actions, activateWindow, addAction, addActions, adjustSize, autoFillBackground, backgroundRole, baseSize, changeEvent, childAt, childrenRect, childrenRegion, clearFocus, clearMask, close, contentsMargins, contentsRect, contextMenuEvent, contextMenuPolicy, create, cursor, customContextMenuRequested, destroy, devType, dragEnterEvent, dragLeaveEvent, dragMoveEvent, dropEvent, effectiveWinId, enabledChange, ensurePolished, enterEvent, event, find, focusInEvent, focusNextChild, focusNextPrevChild, focusOutEvent, focusPolicy, focusPreviousChild, focusProxy, focusWidget, font, fontChange, fontInfo, fontMetrics, foregroundRole, frameGeometry, frameSize, geometry, getContentsMargins, grabGesture, grabKeyboard, grabMouse, grabShortcut, graphicsEffect, graphicsProxyWidget, handle, hasFocus, hasMouseTracking, height, heightForWidth, hide, hideEvent, inputContext, inputMethodEvent, inputMethodHints, inputMethodQuery, insertAction, insertActions, isActiveWindow, isAncestorOf, isEnabled, isEnabledTo, isEnabledToTLW, isFullScreen, isHidden, isLeftToRight, isMaximized, isMinimized, isModal, isRightToLeft, isTopLevel, isVisible, isVisibleTo, isWindow, isWindowModified, keyReleaseEvent, keyboardGrabber, languageChange, layout, layoutDirection, leaveEvent, locale, lower, mapFrom, mapFromGlobal, mapFromParent, mapTo, mapToGlobal, mapToParent, mask, maximumHeight, maximumSize, maximumWidth, metric, minimumHeight, minimumSize, minimumSizeHint, minimumWidth, mouseDoubleClickEvent, mouseGrabber, mouseMoveEvent, mousePressEvent, mouseReleaseEvent, move, moveEvent, nativeParentWidget, nextInFocusChain, normalGeometry, overrideWindowFlags, overrideWindowState, paintEngine, paintEvent, palette, paletteChange, parentWidget, pos, previousInFocusChain, raise_, rect, releaseKeyboard, releaseMouse, releaseShortcut, removeAction, render, repaint, resetInputContext, resize, resizeEvent, restoreGeometry, saveGeometry, scroll, setAcceptDrops, setAccessibleDescription, setAccessibleName, setAttribute, setAutoFillBackground, setBackgroundRole, setBaseSize, setContentsMargins, setContextMenuPolicy, setCursor, setDisabled, setEnabled, setFixedHeight, setFixedSize, setFixedWidth, setFocus, setFocusPolicy, setFocusProxy, setFont, setForegroundRole, setGeometry, setGraphicsEffect, setHidden, setInputContext, setInputMethodHints, setLayout, setLayoutDirection, setLocale, setMask, setMaximumHeight, setMaximumSize, setMaximumWidth, setMinimumHeight, setMinimumSize, setMinimumWidth, setMouseTracking, setPalette, setParent, setShortcutAutoRepeat, setShortcutEnabled, setShown, setSizeIncrement, setSizePolicy, setStatusTip, setStyle, setStyleSheet, setTabOrder, setToolTip, setUpdatesEnabled, setVisible, setWhatsThis, setWindowFilePath, setWindowFlags, setWindowIcon, setWindowIconText, setWindowModality, setWindowModified, setWindowOpacity, setWindowRole, setWindowState, setWindowTitle, show, showFullScreen, showMaximized, showMinimized, showNormal, size, sizeHint, sizeIncrement, sizePolicy, stackUnder, statusTip, style, styleSheet, tabletEvent, testAttribute, toolTip, topLevelWidget, underMouse, ungrabGesture, unsetCursor, unsetLayoutDirection, unsetLocale, update, updateGeometry, updateMicroFocus, updatesEnabled, visibleRegion, whatsThis, wheelEvent, width, winId, window, windowActivationChange, windowFilePath, windowFlags, windowIcon, windowIconText, windowModality, windowOpacity, windowRole, windowState, windowTitle, windowType, x, x11Info, x11PictureHandle, y

Inherited from PyQt4.QtCore.QObject: __getattr__, blockSignals, childEvent, children, connect, connectNotify, customEvent, deleteLater, destroyed, disconnect, disconnectNotify, dumpObjectInfo, dumpObjectTree, dynamicPropertyNames, emit, eventFilter, findChild, findChildren, inherits, installEventFilter, isWidgetType, killTimer, metaObject, moveToThread, objectName, property, pyqtConfigure, receivers, removeEventFilter, sender, senderSignalIndex, setObjectName, setProperty, signalsBlocked, startTimer, thread, timerEvent, tr, trUtf8

Inherited from PyQt4.QtGui.QPaintDevice: colorCount, depth, heightMM, logicalDpiX, logicalDpiY, numColors, paintingActive, physicalDpiX, physicalDpiY, widthMM

Inherited from sip.simplewrapper: __new__

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __subclasshook__

Inherited from ui.qt.appframework2.validation.ValidationMixin: runValidation, validationEnabled

Inherited from ui.qt.appframework2.validation.ValidationMixin (private): _validate, _validateAdded, _validateChildren, _validateOwn

Class Methods

[hide private]

Inherited from ui.qt.appframework2.af2.App: panel

Class Variables

[hide private]

Inherited from OptimizationTabMarkerMixin: MARKER_TAB_CLASSES

Inherited from BaseJaguarPanel: INPUT_SUB_TABS, SHORT_NAME, TABS, TASK_NAME

Inherited from ui.qt.appframework2.af2.JobApp: NO_PROGRESS_BAR, PROGRESS_BAR_NO_TEXT, PROGRESS_BAR_WITH_TEXT

Inherited from ui.qt.appframework2.af2.App (private): _singleton

Inherited from PyQt4.QtGui.QWidget: DrawChildren, DrawWindowBackground, IgnoreMask

Inherited from PyQt4.QtCore.QObject: staticMetaObject

Inherited from PyQt4.QtGui.QPaintDevice: PdmDepth, PdmDpiX, PdmDpiY, PdmHeight, PdmHeightMM, PdmNumColors, PdmPhysicalDpiX, PdmPhysicalDpiY, PdmWidth, PdmWidthMM

Instance Variables

[hide private]

Inherited from CoordinateMarkerMixin (private): _selected_eid_atom_total, _selected_eids

Inherited from MarkerMixin: MARKER_TABS

Inherited from ui.qt.appframework2.markers.MarkerMixin: MARKER_ICONS

Inherited from ui.qt.appframework2.markers.MarkerMixin (private): _marked_eid_lengths, _markers, _multi_atom_markers

Properties

[hide private]

Inherited from ui.qt.appframework2.baseapp.BasePanel: title

Inherited from object: __class__