Module _mmutil'
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Module _mmutil'

Functions [hide private]
 
SWIG_PyInstanceMethod_New(...)
 
SwigPyIterator___add__(...)
 
SwigPyIterator___eq__(...)
 
SwigPyIterator___iadd__(...)
 
SwigPyIterator___isub__(...)
 
SwigPyIterator___ne__(...)
 
SwigPyIterator___next__(...)
 
SwigPyIterator___sub__(...)
 
SwigPyIterator_advance(...)
 
SwigPyIterator_copy(...)
 
SwigPyIterator_decr(...)
 
SwigPyIterator_distance(...)
 
SwigPyIterator_equal(...)
 
SwigPyIterator_incr(...)
 
SwigPyIterator_next(...)
 
SwigPyIterator_previous(...)
 
SwigPyIterator_swigregister(...)
 
SwigPyIterator_value(...)
 
_mmfile_get_constant(...)
 
_mmfile_get_filesep_char(...)
 
delete_SwigPyIterator(...)
 
feature_flag_default_state(...)
 
feature_flag_default_state_s(...)
 
feature_flag_is_enabled(...)
 
feature_flag_is_enabled_s(...)
 
feature_flag_user_state(...)
 
feature_flag_user_state_s(...)
 
feature_flags_get_nondefault_map(...)
 
feature_flags_parse_env(...)
 
feature_flags_set_user_state(...)
 
feature_flags_set_user_state_s(...)
 
get_appdata_release_dir(...)
 
mmfile_add_component(...)
 
mmfile_appdata_release_dir(...)
 
mmfile_close(...)
 
mmfile_close_directory(...)
 
mmfile_dir_current_get(...)
 
mmfile_dir_current_pop(...)
 
mmfile_dir_current_push(...)
 
mmfile_dir_current_set(...)
 
mmfile_dir_expand(...)
 
mmfile_dir_expand_buffer(...)
 
mmfile_dir_home(...)
 
mmfile_dir_user_home(...)
 
mmfile_dos_to_unix(...)
 
mmfile_dos_to_unix_convert(...)
 
mmfile_dos_to_unix_register(...)
 
mmfile_errhandler(...)
 
mmfile_exists(...)
 
mmfile_file_exists(...)
 
mmfile_file_get_dir(...)
 
mmfile_file_get_name(...)
 
mmfile_file_get_path(...)
 
mmfile_find(...)
 
mmfile_find_product_dir(...)
 
mmfile_free_component_string(...)
 
mmfile_get_config_dir(...)
 
mmfile_get_constant(...)
 
mmfile_get_desktop_dir(...)
 
mmfile_get_drivesep_char(...)
 
mmfile_get_filesep_char(...)
 
mmfile_get_last_component(...)
 
mmfile_get_mydocuments_dir(...)
 
mmfile_get_mynetworkplaces_dir(...)
 
mmfile_get_next_file(...)
 
mmfile_get_past_release_names(...)
 
mmfile_get_product_directory_names(...)
 
mmfile_get_product_version(...)
 
mmfile_get_release_name(...)
 
mmfile_get_schrodinger_support_error_mesg(...)
 
mmfile_get_schrodinger_temp(...)
 
mmfile_initialize(...)
 
mmfile_is_dosfile(...)
 
mmfile_md5_file(...)
 
mmfile_md5_filter(...)
 
mmfile_md5_string(...)
 
mmfile_mkdir(...)
 
mmfile_open(...)
 
mmfile_open_directory(...)
 
mmfile_parse_path(...)
 
mmfile_path_add(...)
 
mmfile_path_add_cwd(...)
 
mmfile_path_add_home(...)
 
mmfile_path_clear(...)
 
mmfile_path_get(...)
 
mmfile_path_is_absolute(...)
 
mmfile_path_localize(...)
 
mmfile_path_print(...)
 
mmfile_path_set(...)
 
mmfile_path_to_unix(...)
 
mmfile_refcount(...)
 
mmfile_remove_component(...)
 
mmfile_rm_recursive(...)
 
mmfile_schrodinger_appdata_dir(...)
 
mmfile_schrodinger_local_appdata_dir(...)
 
mmfile_schrodinger_userdata_dir(...)
 
mmfile_set_dir_filter(...)
 
mmfile_setup_openmpi(...)
 
mmfile_terminate(...)
 
mmfile_which(...)
Variables [hide private]
  ASL_NAME_SEARCH_SPEEDUP = 0
hash(x)
  BIOLUM_EPIT_IDENT = 1
  CANVAS_PROCESS_MONOMER = 2
  DATIVE_REFINEMENT_1 = 3
hash(x)
  DESMOND_FUEL = 4
  DUMMY_FEATURE_0 = 6
  DUMMY_FEATURE_1 = 7
  ELASTIC_CONSTANTS = 10
  FEATURE_DISABLED = 0
hash(x)
  FEATURE_ENABLED = 1
  FEATURE_NOT_PRESENT = -1
  FEP_CORE_HOPPING = 12
  FEP_MAPPER_ALIGN_CORE_ONLY = 13
  FEP_MAPPER_CHARGE = 14
  HIERARCHICAL_PROJECT_TABLE = 18
  HT_MEMB_PERM = 19
  IPYTHON_TERMINAL = 20
  JAGUAR_OMPI = 22
  JOBCON_DETACHED_JOBS = 23
hash(x)
  JOBCON_RESTRICT_DISKIO = 24
  JOB_ARRAYS = 25
  LEWIS_NANOTUBES = 26
  LIBUNWIND_PROFILER = 27
  LIGAND_FEP_MENUS = 28
  LIPID_FF = 29
  MAESTRO_LINUX_PROFILER = 32
  MMCANON_EQUIVALENT_SITES = 34
  MMFFLD_StrPrep_SKIP_1Dto3D = 35
  MMFFLD_StrPrep_SKIP_CGEN = 36
  MMFFLD_StrPrep_SKIP_STR_PREP = 37
  MMFFLD_USE_METAL_STRUCTURE_CLEANUP = 38
  MMFILE_DIR = 1
  MMFILE_DRIVESEP = ''
  MMFILE_DRIVESEP_UNIX = ''
  MMFILE_DRIVESEP_WIN32 = ':'
  MMFILE_ERROR = -1
  MMFILE_FILE = 0
hash(x)
  MMFILE_FILESEP = '/'
  MMFILE_FILESEP_UNIX = '/'
  MMFILE_FILESEP_WIN32 = '\\'
  MMFILE_NO_MORE_FILES = -2
  MMFILE_OK = 0
hash(x)
  MMFILE_PATHSEP = ':'
  MMFILE_PATH_COMBIGLIDE = '$USERDATA/combiglide:$VCS_EXEC/../.....
  MMFILE_PATH_DESMOND = '$USERDATA/desmond:$DESMOND_EXEC/../../d...
  MMFILE_PATH_JAGUAR_DATA = '$JAGUAR_EXEC/../../data:$JAGUAR_EXE...
  MMFILE_PATH_MACROMODEL = '$USERDATA/macromodel:$MMOD_EXEC/../....
  MMFILE_PATH_MAESTRO_DATA = '$USERDATA/maestro:$MAESTRO_EXEC/.....
  MMFILE_PATH_MMSHARE_DATA = '$USERDATA/mmshare:$MMSHARE_EXEC/.....
  MMFILE_PATH_PSP_DATA = '$USERDATA/psp:$PSP_EXEC/../../data:'
  MMFILE_PATH_QIKPROP = '$USERDATA/qikprop:$QIKPROP_EXEC:$QIKPRO...
  MMPATTY_NEW_X_FOR_DATIVE_BOND_ONLY = 39
  MMPATTY_NEW_X_TREATMENT_FOR_ZOB = 40
  MMSTEREO_VARY_EZ_BONDS = 41
  OPLS_NAME_CHANGE = 45
  OPLS_SKIP_CM1A = 46
  OPLS_VIRTUAL_SITES = 47
  PATCH_ANALYZER = 48
  PATH_MAX = 1024
  PHASE_V5 = 49
  PRIME_ENTROPY = 51
  PROJECT_V4 = 52
  RADICALS_FORCE_OFF = 53
  RADICALS_FORCE_ON = 54
  SCIENTIFIC_SOLUTIONS_MENUS = 55
  SET_QUEUE_RESOURCES = 57
  SWIG_PLOP = 59
  SYSBUILDER_MMFFLD_PBC = 60
  TRANSFERAGENT_AS_PROCESS = 62
  USE_05_ES_PROTEIN_SCALE = 63
  USE_05_LJ_PROTEIN_SCALE = 64
  USE_FAST3D_FOR_2D_TO_3D_CONVERSION = 66
  USE_LIGPREP_FOR_2D_TO_3D_CONVERSION = 68
  USE_OPLS2005_LIGAND = 69
  USE_OPLS2005_PROTEIN = 70
  WORKSPACE_FEEDBACK = 72
  ZOB_REFINEMENT_1 = 74
  _MMFILE_DRIVESEP = 1
  _MMFILE_FILESEP = 0
hash(x)
  _MMFILE_PATH_COMBIGLIDE = 8
  _MMFILE_PATH_DESMOND = 9
  _MMFILE_PATH_JAGUAR_DATA = 5
  _MMFILE_PATH_MACROMODEL = 4
  _MMFILE_PATH_MAESTRO_DATA = 3
hash(x)
  _MMFILE_PATH_MMSHARE_DATA = 2
  _MMFILE_PATH_PSP_DATA = 6
  _MMFILE_PATH_QIKPROP = 7
  __package__ = None
hash(x)
Variables Details [hide private]

MMFILE_PATH_COMBIGLIDE

Value:
'$USERDATA/combiglide:$VCS_EXEC/../../data:$COMBIGLIDE_EXEC/../../data\
'

MMFILE_PATH_DESMOND

Value:
'$USERDATA/desmond:$DESMOND_EXEC/../../data:$MMSHARE_EXEC/../../data/d\
esmond'

MMFILE_PATH_JAGUAR_DATA

Value:
'$JAGUAR_EXEC/../../data:$JAGUAR_EXEC/../../uff:'

MMFILE_PATH_MACROMODEL

Value:
'$USERDATA/macromodel:$MMOD_EXEC/../../data'

MMFILE_PATH_MAESTRO_DATA

Value:
'$USERDATA/maestro:$MAESTRO_EXEC/../../data:$MAESTRO_EXEC/../../data/r\
es'

MMFILE_PATH_MMSHARE_DATA

Value:
'$USERDATA/mmshare:$MMSHARE_EXEC/../../data:$MMSHARE_EXEC/../../data/r\
es:$MMSHARE_EXEC/../../data/xres'

MMFILE_PATH_QIKPROP

Value:
'$USERDATA/qikprop:$QIKPROP_EXEC:$QIKPROP_EXEC/../../data'