Package schrodinger :: Package analysis :: Module enrichment :: Class Plotter

Class Plotter

  object --+    
           |    
_BasePlotter --+
               |
              Plotter


A class to plot multiple series of Calculator data.

API example
-----------
Where <enrich_calc1> and <enrich_calc2> are instances of Calculator:

enrich_plotter = enrichment.Plotter([enrich_calc1, enrich_calc2])
enrich_plotter.plot() # Launch interactive plot window.
enrich_plotter.savePlot('my_plot.png') # Save plot to file.

There are six line styles defined by default.  Plotting more than
six results cycles through the styles.

Instance Methods

[hide private]

__init__(self, calcs, title='Screen Results', xlabel='1-Specificity', ylabel='Sensitivity')
Returns: None

list

getPointsFromCalc(self, calc)
Returns points for this metric from the given Calculator instance.

Inherited from _BasePlotter: addReferenceSeries, addSeries, getLegendLabel, getPlotFigure, plot, savePlot, showPlotWindow

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, calcs, title=`'Screen Results'`, xlabel=`'1-Specificity'`, ylabel=`'Sensitivity'`)
(Constructor)

x.__init__(...) initializes x; see help(type(x)) for signature

Parameters:

calcs (list) - list of Calculator instances
title (string) - the plot title
xlabel (str) - the x-axis label
ylabel (str) - the y-axis label

Returns:

None

Overrides: object.__init__

getPointsFromCalc(self, calc)

Returns points for this metric from the given Calculator instance.

Parameters:

calc (Calculator
@return List of (x, y) points
) - Calculator instance.

Returns: list

Overrides: _BasePlotter.getPointsFromCalc

Class Plotter

__init__(self, calcs, title='Screen Results', xlabel='1-Specificity', ylabel='Sensitivity') (Constructor)

getPointsFromCalc(self, calc)

init(self, calcs, title=`'Screen Results'`, xlabel=`'1-Specificity'`, ylabel=`'Sensitivity'`)
(Constructor)