schrodinger :: application :: desmond :: stage :: TimeSeriesAnalysisJob :: Class TimeSeriesAnalysisJob

Class TimeSeriesAnalysisJob

object --+        
         |        
   cmj.Job --+    
             |    
   AnalysisJob --+
                 |
                TimeSeriesAnalysisJob

Nested Classes

[hide private]

Inherited from cmj.Job: Time

Instance Methods

[hide private]

__init__(self, time_series, prob_profile, *arg, **kwarg)
x.__init__(...) initializes x; see help(type(x)) for signature

_get_requestname(self, request)

_get_title(self, request)

run(self)

Inherited from AnalysisJob: __getstate__

Inherited from cmj.Job: __deepcopy__, __setstate__, __str__, describe, finish, launch, update

Inherited from cmj.Job (private): _host_str, _log, _print

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __subclasshook__

Static Methods

[hide private]

Inherited from cmj.Job: get_time

Inherited from cmj.Job (private): _get_time_helper

Class Variables

[hide private]

PR_NAME = {'angle': 'P(angle)', 'dihedral': 'P(dihe)', 'distan...

TS_NAME = {'angle': 'angle(t)', 'dihedral': 'dihe(t)', 'distan...

Y_MARKER = {'angle': ('angle (deg)', 'x', 'purple', 'red'), 'd...

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, time_series, prob_profile, *arg, **kwarg)
(Constructor)

x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__

run(self)

Overrides: AnalysisJob.run

Class Variable Details

[hide private]

PR_NAME

Value:

{'angle': 'P(angle)', 'dihedral': 'P(dihe)', 'distance': 'P(dist)'}

TS_NAME

Value:

{'angle': 'angle(t)', 'dihedral': 'dihe(t)', 'distance': 'dist(t)'}

Y_MARKER

Value:

{'angle': ('angle (deg)', 'x', 'purple', 'red'),
 'dihedral': ('dihe (deg)', 'circle', 'skyblue', 'blue'),
 'distance': ('dist (A)', 'diamond', 'grey', 'black')}

Class TimeSeriesAnalysisJob

__init__(self, time_series, prob_profile, *arg, **kwarg) (Constructor)

run(self)

PR_NAME

TS_NAME

Y_MARKER

init(self, time_series, prob_profile, *arg, **kwarg)
(Constructor)