|  | 
        
          | __init__(self,
        hypo,
        zip_hyp_file=None,
        lig_st=None) Initialize the Hypothesis instance from a given hypothesis path or 
      zip file path.
 |  |  | 
    |  | 
        
          | _readFromZipFile(self,
        zip_hyp_file) |  |  | 
    |  |  | 
    |  |  | 
    |  |  | 
    |  |  | 
    |  | 
        
          | write(self,
        hypo) Export the hypothesis to the given path.
 |  |  | 
    |  | 
        
          | _readFromPath(self,
        hypo) Read the hypothesis from the given path.
 |  |  | 
    |  |  | 
    |  |  | 
    |  | 
        
          | _readDXYZFile(self,
        hypo) NOT USED for r2011
 |  |  | 
    |  | 
        
          | _writeXYZFile(self,
        xyz_file) Write the <hypo>.xyz file.
 |  |  | 
    |  | 
        
          | _writeDXYZFile(self,
        hypo) NOT USED for r2011 This will create the <hypo>.dxyz file
 |  |  | 
    |  | 
        
          | _writeMaskFile(self,
        mask_file) This will write the <hypo>.mask file.
 |  |  | 
    |  | 
        
          | _writeDefFile(self,
        def_file) |  |  | 
  
    | Inherited from object:__delattr__,__format__,__getattribute__,__hash__,__new__,__reduce__,__reduce_ex__,__repr__,__setattr__,__sizeof__,__str__,__subclasshook__ |