Package schrodinger :: Package application :: Package bioluminate :: Module pml_menus :: Class AntibodyPreset

Class AntibodyPreset

       object --+                        
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sip.simplewrapper --+                    
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          sip.wrapper --+                
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     PyQt4.QtCore.QObject --+            
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          PyQt4.QtGui.QAction --+        
                                |        
                          MAction --+    
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                       object --+   |    
                                |   |    
                LigandActionMixin --+    
                                    |    
                         PresetAction --+
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                                       AntibodyPreset

Nested Classes

[hide private]

Inherited from PyQt4.QtGui.QAction: ActionEvent, MenuRole, Priority, SoftKeyRole

Instance Methods

[hide private]

str

createTextSequence(self, chain)
Create a text sequence (string of 1-letter residue codes) from a chain

command(self)
Identify regions in an antibody structure Show everything as cartoon ribbons Heavy chains in Cyan

Inherited from PresetAction: finish, reset

Inherited from MAction: __init__

Inherited from PyQt4.QtGui.QAction: actionGroup, activate, associatedGraphicsWidgets, associatedWidgets, autoRepeat, changed, data, event, font, hover, hovered, icon, iconText, isCheckable, isChecked, isEnabled, isIconVisibleInMenu, isSeparator, isVisible, menu, menuRole, parentWidget, priority, setActionGroup, setAutoRepeat, setCheckable, setChecked, setData, setDisabled, setEnabled, setFont, setIcon, setIconText, setIconVisibleInMenu, setMenu, setMenuRole, setPriority, setSeparator, setShortcut, setShortcutContext, setShortcuts, setSoftKeyRole, setStatusTip, setText, setToolTip, setVisible, setWhatsThis, shortcut, shortcutContext, shortcuts, showStatusText, softKeyRole, statusTip, text, toggle, toggled, toolTip, trigger, triggered, whatsThis

Inherited from PyQt4.QtCore.QObject: __getattr__, blockSignals, childEvent, children, connect, connectNotify, customEvent, deleteLater, destroyed, disconnect, disconnectNotify, dumpObjectInfo, dumpObjectTree, dynamicPropertyNames, emit, eventFilter, findChild, findChildren, inherits, installEventFilter, isWidgetType, killTimer, metaObject, moveToThread, objectName, parent, property, pyqtConfigure, receivers, removeEventFilter, sender, senderSignalIndex, setObjectName, setParent, setProperty, signalsBlocked, startTimer, thread, timerEvent, tr, trUtf8

Inherited from sip.simplewrapper: __new__

Inherited from LigandActionMixin: makeLigandASL

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables

[hide private]

Inherited from PyQt4.QtGui.QAction: AboutQtRole, AboutRole, ApplicationSpecificRole, HighPriority, Hover, LowPriority, NegativeSoftKey, NoRole, NoSoftKey, NormalPriority, PositiveSoftKey, PreferencesRole, QuitRole, SelectSoftKey, TextHeuristicRole, Trigger

Inherited from PyQt4.QtCore.QObject: staticMetaObject

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

createTextSequence(self, chain)

Create a text sequence (string of 1-letter residue codes) from a chain

Parameters:

chain (schrodinger.structure._Chain) - The chain to turn into a text sequence

Returns: str

A string of 1-letter residue codes that describes Chain

command(self)

Identify regions in an antibody structure Show everything as cartoon ribbons Heavy chains in Cyan

Overrides: MAction.command