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update the system by setting properties corresponding to key to the value val. key can take the following forms: 1) foo -- same as atom.foo 2) atom.foo -- atom property foo 3) residue.foo -- residue property foo 4) chain.foo -- chain property foo 5) table.foo -- property foo of all terms 6) box.foo -- where foo is x, y, z, or d (sets all three) |
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