Package schrodinger :: Package application :: Package matsci :: Module desmondutils :: Class MinimizeMSJStringer
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Class MinimizeMSJStringer

 object --+    
          |    
MSJStringer --+
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             MinimizeMSJStringer

An MSJStringer class for Minimizer stages

Instance Methods [hide private]
 
__init__(self, iterations=None, last=False, **kwargs)
Create a MinimizeMSJStringer object
str
getTitle(self)
Return a title for the stage describing the main parameters.

Inherited from MSJStringer: createString, formLine

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]

Inherited from MSJStringer: ANALYSIS, ANALYSIS_TYPE, CHECKPOINT, COMPRESS, DIR, DOT, ENSEMBLE, ENSEMBLE_CLASS, ENSEMBLE_METHOD, INDENT, INTERVAL, JOBNAME, KNOWN_LINES, LINE_ORDER, MAX_STEPS, MINIMIZE, MSJ_BASE, MSJ_LAST, OTHERS, PADDING, PRESSURE, SETTINGS, SIMULATE, SYSBUILD, TEMP, TIME, TIMESTEP

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, iterations=None, last=False, **kwargs)
(Constructor)

 

Create a MinimizeMSJStringer object

Parameters:
  • last (bool) - Whether the msj lines typically associated with the last stage (dir, compress) should be included
  • iterations (int) - The number of iterations. If not provided the Desmond default will be used.

    All other keyword arguments are turned into lines in the .msj file. See parent class for additional information.

Overrides: object.__init__

getTitle(self)

 

Return a title for the stage describing the main parameters.

Returns: str
The title for this stage
Overrides: MSJStringer.getTitle