|
_newclass = 1
|
|
cout = <schrodinger.infra.mmjob.ostream; proxy of <Swig Object...
|
|
cerr = <schrodinger.infra.mmjob.ostream; proxy of <Swig Object...
|
|
mmjob_host_get_accountcodes = _mmjob.mmjob_host_get_accountcodes
|
|
MMJOB_TRUE = 1
|
|
MMJOB_FALSE = 0
hash(x)
|
|
MMJOB_OK = 0
hash(x)
|
|
MMJOB_UNINITIALIZED = 1
|
|
MMJOB_BAD_HANDLE = 2
|
|
MMJOB_BAD_ARGUMENT = 3
hash(x)
|
|
MMJOB_JOBDB_MISSING = 4
|
|
MMJOB_HOSTS_MISSING = 5
|
|
MMJOB_INCLUDE_MISSING = 6
|
|
MMJOB_NO_SUCH_HOST = 7
|
|
MMJOB_FILE_NOT_FOUND = 8
|
|
MMJOB_FILE_LOCKED = 9
|
|
MMJOB_FILE_OPEN_ERROR = 10
|
|
MMJOB_FILE_READ_ERROR = 11
|
|
MMJOB_FILE_WRITE_ERROR = 12
|
|
MMJOB_NO_SUCH_KEY = 13
|
|
MMJOB_NOT_INTEGER = 14
|
|
MMJOB_NOT_STRING = 15
|
|
MMJOB_NOT_LIST = 16
|
|
MMJOB_ILLEGAL_VALUE = 17
|
|
MMJOB_ILLEGAL_QUERY = 18
|
|
MMJOB_TRUNCATION = 19
|
|
MMJOB_OUT_OF_MEMORY = 20
|
|
MMJOB_NO_QUEUE = 21
|
|
MMJOB_FILESIZE_MISMATCH = 22
|
|
MMJOB_EMPTY_JOBRECORD = 23
|
|
MMJOB_CONN_REFUSED = 24
|
|
MMJOB_JSERVER_ERROR = 25
|
|
MMJOB_RETRIABLE_NETWORK_ERROR = 26
|
|
MMJOB_ERROR = 27
|
|
MMJOB_STATUS_LAUNCHED = 1
|
|
MMJOB_STATUS_SUBMITTED = 2
|
|
MMJOB_STATUS_STARTED = 3
hash(x)
|
|
MMJOB_STATUS_RUNNING = 4
|
|
MMJOB_STATUS_PAUSED = 5
|
|
MMJOB_STATUS_EXITED = 6
|
|
MMJOB_STATUS_UNREACHABLE = 7
|
|
MMJOB_STATUS_STRANDED = 8
|
|
MMJOB_STATUS_COMPLETED = 127
|
|
MMJOB_STATUS_INCORPORATED = 128
|
|
MMJOB_DISPOSITION_IGNORE = 0
hash(x)
|
|
MMJOB_DISPOSITION_APPEND = 1
|
|
MMJOB_DISPOSITION_REPLACE = 2
|
|
MMJOB_JOB_DISPOSITION_FIELD_SEP = ' : '
|
|
mmjob_initialize = _mmjob.mmjob_initialize
|
|
mmjob_terminate = _mmjob.mmjob_terminate
|
|
mmjob_refcount = _mmjob.mmjob_refcount
|
|
mmjob_errhandler = _mmjob.mmjob_errhandler
|
|
mmjob_new = _mmjob.mmjob_new
|
|
mmjob_delete = _mmjob.mmjob_delete
|
|
mmjob_in_use = _mmjob.mmjob_in_use
|
|
mmjob_object_counts = _mmjob.mmjob_object_counts
|
|
mmjob_get_total_reads = _mmjob.mmjob_get_total_reads
|
|
mmjob_jobdb_path = _mmjob.mmjob_jobdb_path
|
|
mmjob_jobrecord_path = _mmjob.mmjob_jobrecord_path
|
|
mmjob_read_db = _mmjob.mmjob_read_db
|
|
mmjob_read_db_noretry = _mmjob.mmjob_read_db_noretry
|
|
mmjob_write_db = _mmjob.mmjob_write_db
|
|
mmjob_read_index = _mmjob.mmjob_read_index
|
|
mmjob_read_file = _mmjob.mmjob_read_file
|
|
mmjob_write_file = _mmjob.mmjob_write_file
|
|
mmjob_read_again_noretry = _mmjob.mmjob_read_again_noretry
|
|
mmjob_purge = _mmjob.mmjob_purge
|
|
mmjob_cleanup = _mmjob.mmjob_cleanup
|
|
mmjob_jobdb_index_reload = _mmjob.mmjob_jobdb_index_reload
|
|
mmjob_is_detached = _mmjob.mmjob_is_detached
|
|
MMJOB_QUERY_NEW = 0
hash(x)
|
|
MMJOB_QUERY_BROADEN = 1
|
|
MMJOB_QUERY_NARROW = 2
|
|
MMJOB_OP_EQUAL = 1
|
|
MMJOB_OP_NOT_EQUAL = 2
|
|
MMJOB_OP_CONTAINS = 3
hash(x)
|
|
MMJOB_OP_NOT_CONTAINS = 4
|
|
MMJOB_OP_SINCE = 5
|
|
MMJOB_OP_BEFORE = 6
|
|
mmjob_query = _mmjob.mmjob_query
|
|
mmjob_select_active = _mmjob.mmjob_select_active
|
|
mmjob_select_all = _mmjob.mmjob_select_all
|
|
mmjob_selection_length = _mmjob.mmjob_selection_length
|
|
mmjob_selection = _mmjob.mmjob_selection
|
|
mmjob_is_complete = _mmjob.mmjob_is_complete
|
|
mmjob_is_queued = _mmjob.mmjob_is_queued
|
|
mmjob_is_secure = _mmjob.mmjob_is_secure
|
|
mmjob_keys_length = _mmjob.mmjob_keys_length
|
|
mmjob_keys_item = _mmjob.mmjob_keys_item
|
|
mmjob_set_str = _mmjob.mmjob_set_str
|
|
mmjob_set_int = _mmjob.mmjob_set_int
|
|
mmjob_get_int = _mmjob.mmjob_get_int
|
|
mmjob_get_job_disposition = _mmjob.mmjob_get_job_disposition
|
|
mmjob_nonempty_value = _mmjob.mmjob_nonempty_value
|
|
mmjob_is_list = _mmjob.mmjob_is_list
|
|
mmjob_list_length = _mmjob.mmjob_list_length
|
|
mmjob_list_item = _mmjob.mmjob_list_item
|
|
mmjob_get_input_files = _mmjob.mmjob_get_input_files
|
|
mmjob_get_output_files = _mmjob.mmjob_get_output_files
|
|
mmjob_get_log_files = _mmjob.mmjob_get_log_files
|
|
mmjob_get_error_count = _mmjob.mmjob_get_error_count
|
|
mmjob_get_subjob_count = _mmjob.mmjob_get_subjob_count
|
|
mmjob_status_string = _mmjob.mmjob_status_string
|
|
mmjob_disposition_string = _mmjob.mmjob_disposition_string
|
|
mmjob_hostfile_path = _mmjob.mmjob_hostfile_path
|
|
mmjob_hosts_reload = _mmjob.mmjob_hosts_reload
|
|
mmjob_queue_parent_dir = _mmjob.mmjob_queue_parent_dir
|
|
mmjob_hosts_length = _mmjob.mmjob_hosts_length
|
|
mmjob_host_name = _mmjob.mmjob_host_name
|
|
mmjob_host_keys_length = _mmjob.mmjob_host_keys_length
|
|
mmjob_host_is_queue = _mmjob.mmjob_host_is_queue
|
|
mmjob_host_is_parallel = _mmjob.mmjob_host_is_parallel
|
|
mmjob_host_keys_item = _mmjob.mmjob_host_keys_item
|
|
mmjob_host_get_str = _mmjob.mmjob_host_get_str
|
|
mmjob_host_get_int = _mmjob.mmjob_host_get_int
|
|
mmjob_get_progress_percentage = _mmjob.mmjob_get_progress_perc...
|
|
mmjob_get_progress_string = _mmjob.mmjob_get_progress_string
|
|
mmjob_get_progress_steps = _mmjob.mmjob_get_progress_steps
|
|
mmjob_host_is_list = _mmjob.mmjob_host_is_list
|
|
mmjob_host_list_length = _mmjob.mmjob_host_list_length
|
|
mmjob_host_list_item = _mmjob.mmjob_host_list_item
|
|
mmjob_host_gpgpu_length = _mmjob.mmjob_host_gpgpu_length
|
|
mmjob_host_gpgpu_item = _mmjob.mmjob_host_gpgpu_item
|
|
mmjob_host_maestrocontrols = _mmjob.mmjob_host_maestrocontrols
|
|
mmjob_host_maestrocontrols_swig = _mmjob.mmjob_host_maestrocon...
|
|
mmjob_host_get_walltime = _mmjob.mmjob_host_get_walltime
|
|
mmjob_host_get_memory = _mmjob.mmjob_host_get_memory
|
|
mmjob_host_get_qargs_memory = _mmjob.mmjob_host_get_qargs_memory
|
|
mmjob_host_get_qargs_walltime = _mmjob.mmjob_host_get_qargs_wa...
|
|
mmjob_host_get_qargs_accountcode = _mmjob.mmjob_host_get_qargs...
|
|
mmjob_queue_config_path = _mmjob.mmjob_queue_config_path
|
|
mmjob_queue_jobarrays = _mmjob.mmjob_queue_jobarrays
|
|
mmjob_print_job = _mmjob.mmjob_print_job
|
|
mmjob_print_error = _mmjob.mmjob_print_error
|
|
mmjob_free_string_array = _mmjob.mmjob_free_string_array
|
|
mmjob_find_job = _mmjob.mmjob_find_job
|
|
mmjob_get_str = _mmjob.mmjob_get_str
|
|
mmjob_is_valid_hostname = _mmjob.mmjob_is_valid_hostname
|
|
mmjob_read_again = _mmjob.mmjob_read_again
|
|
mmjob_err_string = _mmjob.mmjob_err_string
|
|
MMJOBBE_TRUE = 1
|
|
MMJOBBE_FALSE = 0
hash(x)
|
|
MMJOBBE_OK = 0
hash(x)
|
|
MMJOBBE_UNINITIALIZED = 1
|
|
MMJOBBE_NO_JMONITOR = 2
|
|
MMJOBBE_BAD_FIFO_DIR = 3
hash(x)
|
|
MMJOBBE_BAD_MKFIFO = 4
|
|
MMJOBBE_BAD_RMFIFO = 5
|
|
MMJOBBE_BAD_FIFO = 6
|
|
MMJOBBE_BAD_READ_OPEN = 7
|
|
MMJOBBE_BAD_WRITE_OPEN = 8
|
|
MMJOBBE_EMPTY_MESSAGE = 9
|
|
MMJOBBE_BAD_MESSAGE = 10
|
|
MMJOBBE_EMPTY_FIFO = 11
|
|
MMJOBBE_FIFO_OVERFLOW = 12
|
|
MMJOBBE_BAD_WRITE = 13
|
|
MMJOBBE_BAD_READ = 14
|
|
MMJOBBE_BAD_FILENAME = 15
|
|
MMJOBBE_BAD_LISTNAME = 16
|
|
MMJOBBE_BAD_MSGNAME = 17
|
|
MMJOBBE_CANT_LOCK = 18
|
|
MMJOBBE_CANT_UNLOCK = 19
|
|
MMJOBBE_MALLOC = 20
|
|
MMJOBBE_NO_JOBID = 21
|
|
MMJOBBE_EMPTY_LIST = 22
|
|
MMJOBBE_ERROR = 23
|
|
mmjobbe_initialize = _mmjob.mmjobbe_initialize
|
|
mmjobbe_initialize_subprocess = _mmjob.mmjobbe_initialize_subp...
|
|
mmjobbe_terminate = _mmjob.mmjobbe_terminate
|
|
mmjobbe_refcount = _mmjob.mmjobbe_refcount
|
|
mmjobbe_job_record = _mmjob.mmjobbe_job_record
|
|
mmjobbe_job_directory = _mmjob.mmjobbe_job_directory
|
|
mmjobbe_need_monitor_files = _mmjob.mmjobbe_need_monitor_files
|
|
mmjobbe_need_output_files = _mmjob.mmjobbe_need_output_files
|
|
mmjobbe_halt_requested = _mmjob.mmjobbe_halt_requested
|
|
mmjobbe_pause_requested = _mmjob.mmjobbe_pause_requested
|
|
mmjobbe_resume_requested = _mmjob.mmjobbe_resume_requested
|
|
mmjobbe_path_runtime = _mmjob.mmjobbe_path_runtime
|
|
mmjobbe_subjob_status_changed = _mmjob.mmjobbe_subjob_status_c...
|
|
mmjobbe_copy_outputs = _mmjob.mmjobbe_copy_outputs
|
|
mmjobbe_add_outputfile = _mmjob.mmjobbe_add_outputfile
|
|
mmjobbe_add_required_outputfile = _mmjob.mmjobbe_add_required_...
|
|
mmjobbe_add_monitorfile = _mmjob.mmjobbe_add_monitorfile
|
|
mmjobbe_add_logfile = _mmjob.mmjobbe_add_logfile
|
|
mmjobbe_set_structure_monitor_file = _mmjob.mmjobbe_set_struct...
|
|
mmjobbe_set_structure_output_file = _mmjob.mmjobbe_set_structu...
|
|
mmjobbe_set_structurefile = _mmjob.mmjobbe_set_structurefile
|
|
mmjobbe_copy_outputfile = _mmjob.mmjobbe_copy_outputfile
|
|
mmjobbe_syncdb = _mmjob.mmjobbe_syncdb
|
|
mmjobbe_set_jobprogress = _mmjob.mmjobbe_set_jobprogress
|
|
mmjobbe_send_parent = _mmjob.mmjobbe_send_parent
|
|
mmjobbe_send_subjob = _mmjob.mmjobbe_send_subjob
|
|
mmjobbe_send_subjobs = _mmjob.mmjobbe_send_subjobs
|
|
mmjobbe_send_message = _mmjob.mmjobbe_send_message
|
|
mmjobbe_add_message_name = _mmjob.mmjobbe_add_message_name
|
|
mmjobbe_next_message = _mmjob.mmjobbe_next_message
|
|
MMJOBBE_STATUS_ACTIVE = 0
hash(x)
|
|
MMJOBBE_STATUS_NO_JMONITOR = 1
|
|
MMJOBBE_STATUS_NO_FIFO = 2
|
|
mmjobbe_jmonitor_fifo_path = _mmjob.mmjobbe_jmonitor_fifo_path
|
|
mmjobbe_backend_fifo_path = _mmjob.mmjobbe_backend_fifo_path
|
|
mmjobbe_has_jobcontrol = _mmjob.mmjobbe_has_jobcontrol
|
|
mmjobbe_jobid = _mmjob.mmjobbe_jobid
|
|
mmjobbe_taskid = _mmjob.mmjobbe_taskid
|
|
mmjobbe_jobpid = _mmjob.mmjobbe_jobpid
|
|
mmjobbe_print_state = _mmjob.mmjobbe_print_state
|
|
mmjobbe_print_error = _mmjob.mmjobbe_print_error
|
|
mmjobbe_set_in_unittest = _mmjob.mmjobbe_set_in_unittest
|
|
mmjobbe_err_string = _mmjob.mmjobbe_err_string
|
|
MMJOBFE_TRUE = 1
|
|
MMJOBFE_FALSE = 0
hash(x)
|
|
MMJOBFE_OK = 0
hash(x)
|
|
MMJOBFE_UNINITIALIZED = 1
|
|
MMJOBFE_BAD_HANDLE = 2
|
|
MMJOBFE_OUT_OF_MEMORY = 3
hash(x)
|
|
MMJOBFE_JOBDB_MISSING = 4
|
|
MMJOBFE_JOBID_MISSING = 5
|
|
MMJOBFE_FILE_NOT_FOUND = 6
|
|
MMJOBFE_FILE_OPEN_ERROR = 7
|
|
MMJOBFE_FILE_READ_ERROR = 8
|
|
MMJOBFE_NO_SUCH_KEY = 9
|
|
MMJOBFE_NOT_INTEGER = 10
|
|
MMJOBFE_NOT_STRING = 11
|
|
MMJOBFE_NOT_LIST = 12
|
|
MMJOBFE_ILLEGAL_VALUE = 13
|
|
MMJOBFE_FILE_LOCKED = 14
|
|
MMJOBFE_BAD_FILENAME = 15
|
|
MMJOBFE_BAD_LISTNAME = 16
|
|
MMJOBFE_BAD_ARGUMENT = 17
|
|
MMJOBFE_NO_CONNECTION = 18
|
|
MMJOBFE_EMPTY_MESSAGE = 19
|
|
MMJOBFE_BAD_MESSAGE = 20
|
|
MMJOBFE_SEND_FAILURE = 21
|
|
MMJOBFE_READ_FAILURE = 22
|
|
MMJOBFE_SOCKET_CLOSED = 23
|
|
MMJOBFE_TRUNCATION = 24
|
|
MMJOBFE_NO_LAUNCH = 25
|
|
MMJOBFE_SYS_SIGNAL = 26
|
|
MMJOBFE_SYS_IPADDR = 27
|
|
MMJOBFE_SYS_SOCKET = 28
|
|
MMJOBFE_SYS_CONNECT = 29
|
|
MMJOBFE_DEAF_BACKEND = 30
|
|
MMJOBFE_MMJOB_ERROR = 31
|
|
MMJOBFE_ERROR = 127
|
|
mmjobfe_initialize = mmjob.mmjobfe_initialize
|
|
mmjobfe_terminate = _mmjob.mmjobfe_terminate
|
|
mmjobfe_refcount = _mmjob.mmjobfe_refcount
|
|
mmjobfe_launch_job = _mmjob.mmjobfe_launch_job
|
|
mmjobfe_new = _mmjob.mmjobfe_new
|
|
mmjobfe_new_noretry = _mmjob.mmjobfe_new_noretry
|
|
mmjobfe_refresh = _mmjob.mmjobfe_refresh
|
|
mmjobfe_refresh_noretry = _mmjob.mmjobfe_refresh_noretry
|
|
mmjobfe_delete = _mmjob.mmjobfe_delete
|
|
mmjobfe_in_use = _mmjob.mmjobfe_in_use
|
|
mmjobfe_object_counts = _mmjob.mmjobfe_object_counts
|
|
mmjobfe_connection_open = _mmjob.mmjobfe_connection_open
|
|
mmjobfe_connection_close = _mmjob.mmjobfe_connection_close
|
|
mmjobfe_ping_job = _mmjob.mmjobfe_ping_job
|
|
mmjobfe_halt = _mmjob.mmjobfe_halt
|
|
mmjobfe_halt_no_output = _mmjob.mmjobfe_halt_no_output
|
|
mmjobfe_halt_gracefully = _mmjob.mmjobfe_halt_gracefully
|
|
mmjobfe_pause = _mmjob.mmjobfe_pause
|
|
mmjobfe_pause_gracefully = _mmjob.mmjobfe_pause_gracefully
|
|
mmjobfe_resume = _mmjob.mmjobfe_resume
|
|
mmjobfe_resume_gracefully = _mmjob.mmjobfe_resume_gracefully
|
|
mmjobfe_update_output = _mmjob.mmjobfe_update_output
|
|
mmjobfe_send_message = _mmjob.mmjobfe_send_message
|
|
mmjobfe_is_complete = _mmjob.mmjobfe_is_complete
|
|
mmjobfe_is_queued = _mmjob.mmjobfe_is_queued
|
|
mmjobfe_keys_length = _mmjob.mmjobfe_keys_length
|
|
mmjobfe_keys_item = _mmjob.mmjobfe_keys_item
|
|
mmjobfe_get_str = _mmjob.mmjobfe_get_str
|
|
mmjobfe_get_int = _mmjob.mmjobfe_get_int
|
|
mmjobfe_get_job_disposition = _mmjob.mmjobfe_get_job_disposition
|
|
mmjobfe_get_progress_percentage = _mmjob.mmjobfe_get_progress_...
|
|
mmjobfe_get_progress_steps = _mmjob.mmjobfe_get_progress_steps
|
|
mmjobfe_get_progress_string = _mmjob.mmjobfe_get_progress_string
|
|
mmjobfe_set_status_incorporated = _mmjob.mmjobfe_set_status_in...
|
|
mmjobfe_set_project = _mmjob.mmjobfe_set_project
|
|
mmjobfe_is_list = _mmjob.mmjobfe_is_list
|
|
mmjobfe_list_length = _mmjob.mmjobfe_list_length
|
|
mmjobfe_list_item = _mmjob.mmjobfe_list_item
|
|
mmjobfe_get_input_files = _mmjob.mmjobfe_get_input_files
|
|
mmjobfe_get_output_files = _mmjob.mmjobfe_get_output_files
|
|
mmjobfe_get_log_files = _mmjob.mmjobfe_get_log_files
|
|
mmjobfe_file_changed = _mmjob.mmjobfe_file_changed
|
|
mmjobfe_open_outputfile = _mmjob.mmjobfe_open_outputfile
|
|
mmjobfe_set_readlock = _mmjob.mmjobfe_set_readlock
|
|
mmjobfe_release_readlock = _mmjob.mmjobfe_release_readlock
|
|
mmjobfe_print_job = _mmjob.mmjobfe_print_job
|
|
mmjobfe_print_error = _mmjob.mmjobfe_print_error
|
|
mmjobfe_err_string = _mmjob.mmjobfe_err_string
|
|
mmjob_get_jobserver_err_handler = _mmjob.mmjob_get_jobserver_e...
|
|
Null = object()
|
|
_failure_dict = {'mmjob_disposition_string': Null, 'mmjob_err_...
|
|
_ignored_functions = set([ ' mmjob_get_list ' ])
|
|
_return_code_lists = [ [ ' MMJOB_ERROR ' , ' MMJOB_OK ' , ' MMJOB_UNINI ...
|
|
return_codes = mmcheck.generate_return_code_dict(globals(), _r...
|
|
__package__ = ' schrodinger.infra '
|