Package schrodinger :: Package test :: Module structurecheck
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Module structurecheck

Custom assertions for "checking" structures. Uses the Protein Report to determine whether a structure has (for instance) bad steric clashes, or unreasonable bond angles.

See test_structurecheck.py for examples. It is also used extensively in psp.

copyright (c) Schrodinger, LLC. All rights reserved.

Classes [hide private]
  ProteinReportCheck
This is a wrapper for ProteinReport which is used for unittesting and scientific testing.
Functions [hide private]
 
assert_no_major_problems(ct)
Variables [hide private]
  __unittest = True
Keeps stack trace from including this module.
  __package__ = 'schrodinger.test'
Function Details [hide private]

assert_no_major_problems(ct)

 
Raises:
  • AssertionError - If the connection table contains a SEVERE steric clash, bond length or angle deviation.