Package schrodinger :: Package utils :: Module mmutil
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Module mmutil

Classes [hide private]
  SwigPyIterator
  StringStringMap
Functions [hide private]
 
_swig_setattr_nondynamic(self, class_type, name, value, static=1)
 
_swig_setattr(self, class_type, name, value)
 
_swig_getattr(self, class_type, name)
 
_swig_repr(self)
repr(x)
 
_swig_setattr_nondynamic_method(set)
Variables [hide private]
  _newclass = 1
  PERL_FEATURE_FLAGS = ('AUTOMATIC_JOB_RECOVERY', 'JOB_SERVER', ...
  AUTOMATIC_JOB_RECOVERY = 0
hash(x)
  BIOLUM_EPIT_IDENT = 1
  CANVAS_PROCESS_MONOMER = 2
  CHORUSLIBS_MSYS_EXCLUSION = 3
hash(x)
  DESMOND_FUEL = 4
  DUMMY_FEATURE_0 = 6
  DUMMY_FEATURE_1 = 7
  FEP_CORE_HOPPING = 11
  FEP_MAPPER_CHARGE = 12
  FEP_MAPPER_POSITION_AND_BONDING = 13
  FEP_PER_COMPOUND_LICENSE = 14
  FEP_TOTAL_FREE_ENERGY = 15
  GRAPHDB_PRERELEASE = 19
  HIERARCHICAL_PROJECT_TABLE = 20
  IPYTHON_TERMINAL = 21
  JAGUAR_BABEL1 = 23
hash(x)
  JAGUAR_OMPI = 24
  JOB_SERVER = 25
  LIBUNWIND_PROFILER = 26
  LIGAND_FEP_MENUS = 28
  LIPID_FF = 29
  MAESTRO11 = 30
  MAESTROX = 31
  MAESTRO_LINUX_PROFILER = 33
  MIXED_COORD_BOND_REPRESENTATION = 35
  MMFFLD_StrPrep_SKIP_1Dto3D = 36
  MMFFLD_StrPrep_SKIP_CGEN = 37
  MMFFLD_StrPrep_SKIP_STR_PREP = 38
  MMFFLD_USE_METAL_STRUCTURE_CLEANUP = 39
  OPLS_CMAP = 43
  OPLS_NAME_CHANGE = 44
  OPLS_SKIP_CM1A = 45
  OPLS_VIRTUAL_SITES = 46
  PATCH_ANALYZER = 47
  PENETRANT_LOADING = 48
  PLDB_GUI_ENABLED = 49
  PROJECT_V4 = 51
  PROTEIN_ONLY_LID = 52
  RADICALS_FORCE_OFF = 53
  RADICALS_FORCE_ON = 54
  SCIENTIFIC_SOLUTIONS_MENUS = 55
  SET_QUEUE_RESOURCES = 57
  USE_05_ES_PROTEIN_SCALE = 60
  USE_05_LJ_PROTEIN_SCALE = 61
  USE_COMMON_INTERACTION_DETECTION_LID = 62
  USE_FAST3D_FOR_2D_TO_3D_CONVERSION = 64
  WORKSPACE_FEEDBACK = 66
  ZOB_REFINEMENT_1 = 68
  FEATURE_NOT_PRESENT = -1
  FEATURE_DISABLED = 0
hash(x)
  FEATURE_ENABLED = 1
  PATH_MAX = 1024
  MMFILE_NO_MORE_FILES = -2
  MMFILE_ERROR = -1
  MMFILE_OK = 0
hash(x)
  MMFILE_FILE = 0
hash(x)
  MMFILE_DIR = 1
  MMFILE_FILESEP_WIN32 = '\\'
  MMFILE_FILESEP_UNIX = '/'
  MMFILE_DRIVESEP_WIN32 = ':'
  MMFILE_DRIVESEP_UNIX = ''
  MMFILE_PATHSEP = ':'
  MMFILE_FILESEP = '/'
  MMFILE_DRIVESEP = ''
  MMFILE_PATH_MMSHARE_DATA = '$USERDATA/mmshare:$MMSHARE_EXEC/.....
  MMFILE_PATH_MAESTRO_DATA = '$USERDATA/maestro:$MAESTRO_EXEC/.....
  MMFILE_PATH_MACROMODEL = '$USERDATA/macromodel:$MMOD_EXEC/../....
  MMFILE_PATH_JAGUAR_DATA = '$JAGUAR_EXEC/../../data:$JAGUAR_EXE...
  MMFILE_PATH_PSP_DATA = '$USERDATA/psp:$PSP_EXEC/../../data:'
  MMFILE_PATH_QIKPROP = '$USERDATA/qikprop:$QIKPROP_EXEC:$QIKPRO...
  MMFILE_PATH_COMBIGLIDE = '$USERDATA/combiglide:$VCS_EXEC/../.....
  MMFILE_PATH_DESMOND = '$USERDATA/desmond:$DESMOND_EXEC/../../d...
  _MMFILE_FILESEP = 0
hash(x)
  _MMFILE_DRIVESEP = 1
  _MMFILE_PATH_MMSHARE_DATA = 2
  _MMFILE_PATH_MAESTRO_DATA = 3
hash(x)
  _MMFILE_PATH_MACROMODEL = 4
  _MMFILE_PATH_JAGUAR_DATA = 5
  _MMFILE_PATH_PSP_DATA = 6
  _MMFILE_PATH_QIKPROP = 7
  _MMFILE_PATH_COMBIGLIDE = 8
  _MMFILE_PATH_DESMOND = 9
  __package__ = 'schrodinger.utils'
Variables Details [hide private]

PERL_FEATURE_FLAGS

Value:
('AUTOMATIC_JOB_RECOVERY', 'JOB_SERVER', 'SET_QUEUE_RESOURCES')

MMFILE_PATH_MMSHARE_DATA

Value:
'$USERDATA/mmshare:$MMSHARE_EXEC/../../data:$MMSHARE_EXEC/../../data/r\
es:$MMSHARE_EXEC/../../data/xres'

MMFILE_PATH_MAESTRO_DATA

Value:
'$USERDATA/maestro:$MAESTRO_EXEC/../../data:$MAESTRO_EXEC/../../data/r\
es'

MMFILE_PATH_MACROMODEL

Value:
'$USERDATA/macromodel:$MMOD_EXEC/../../data'

MMFILE_PATH_JAGUAR_DATA

Value:
'$JAGUAR_EXEC/../../data:$JAGUAR_EXEC/../../uff:'

MMFILE_PATH_QIKPROP

Value:
'$USERDATA/qikprop:$QIKPROP_EXEC:$QIKPROP_EXEC/../../data'

MMFILE_PATH_COMBIGLIDE

Value:
'$USERDATA/combiglide:$VCS_EXEC/../../data:$COMBIGLIDE_EXEC/../../data\
'

MMFILE_PATH_DESMOND

Value:
'$USERDATA/desmond:$DESMOND_EXEC/../../data:$MMSHARE_EXEC/../../data/d\
esmond'