Class Packing

read in parameters for packing calculation report residue Z-score

Nested Classes

Fragment
data structure to hold a fragment type

AtomType
data structure to hold an atom type

FragBox
data structure to hold a fragment in a 'box'

ResStats

Instance Methods

__init__(self)

read_fragment(self, frag_file)

read_atomtype(self, type_file)

read_fragbox(self, fragment_template)

read_prob(self, prob_file)

read_stats(self, stats_file)

zscore_lookup(self, resname, sstype, surf, qi)

find_atom_type(self, aname, rname)

find_fragments_in_residue(self, res_ct)

find_fragbox_type(self, label)

residue_zscores(self, input_ct)