schrodinger.application.desmond.picklejar module

Facilities for pickling objects that are otherwise uneasy to pickle, e.g., class attributes.

Copyright Schrodinger, LLC. All rights reserved.

class schrodinger.application.desmond.picklejar.Picklable

Bases: object

class schrodinger.application.desmond.picklejar.PickleJar

Bases: object

static deserialize(fh)

jar = {<class 'schrodinger.application.desmond.stage.FepMapping'>: {}, <class 'schrodinger.application.desmond.stage.Trajectory'>: {}, <class 'schrodinger.application.desmond.stage.Minimize'>: {}, <class 'schrodinger.application.desmond.stage.MatSciAnalysis'>: {}, <class 'schrodinger.application.desmond.stage.FepLauncher'>: {}, <class 'schrodinger.application.desmond.stage.Concatenate'>: {}, <class 'schrodinger.application.desmond.stage.FepMapperCleanup'>: {}, <class 'schrodinger.application.desmond.stage.Task'>: {'gid': None}, <class 'schrodinger.application.desmond.stage.McproSimulate'>: {}, <class 'schrodinger.application.desmond.stage.BuildGeometry'>: {}, <class 'schrodinger.application.desmond.stage.CalcDdg'>: {}, <class 'schrodinger.application.desmond.stage.AlignCore'>: {}, <class 'schrodinger.application.desmond.cmj.StageBase'>: {'count': None}, <class 'schrodinger.application.desmond.stage.Vrun'>: {}, <class 'schrodinger.application.desmond.stage.FepAnalysis'>: {}, <class 'schrodinger.application.desmond.stage.ProteinFepMapper'>: {}, <class 'schrodinger.application.desmond.stage.WaterMapCluster'>: {}, <class 'schrodinger.application.desmond.stage.ForcefieldBuilder'>: {}, <class 'schrodinger.application.desmond.stage.Multisim'>: {}, <class 'schrodinger.application.desmond.stage.ProteinMutationGenerator'>: {}, <class 'schrodinger.application.desmond.stage.PLAnalysis'>: {}, <class 'schrodinger.application.desmond.stage.WaterMapPostAnalysis'>: {}, <class 'schrodinger.application.desmond.stage.Trim'>: {}, <class 'schrodinger.application.desmond.picklejar.Picklable'>: {}, <class 'schrodinger.application.desmond.stage.WaterMap'>: {}, <class 'schrodinger.application.desmond.stage.ReplicaExchange'>: {}, <class 'schrodinger.application.desmond.stage.VacuumReport'>: {}, <class 'schrodinger.application.desmond.stage.Aacg_SiteMap_Multijob'>: {}, <class 'schrodinger.application.desmond.stage.Extern'>: {}, <class 'schrodinger.application.desmond.stage.SolvatePocket'>: {}, <class 'schrodinger.application.desmond.stage.McproSystemBuilder'>: {'_PERT_TRANS': None, '_PERT_ID': None, '_is_inited': None}, <class 'schrodinger.application.desmond.stage.FepJob'>: {'id': None}, <class 'schrodinger.application.desmond.stage.Simulate'>: {}, <class 'schrodinger.application.desmond.stage.FepMapperReport'>: {}, <class 'schrodinger.application.desmond.stage.Concluder'>: {}, <class 'schrodinger.application.desmond.stage.FepVrun'>: {}, <class 'schrodinger.application.desmond.stage.McproStageBase'>: {}, <class 'schrodinger.application.desmond.stage.SystemBuilder'>: {}, <class 'schrodinger.application.desmond.stage.FepMapper'>: {}, <class 'schrodinger.application.desmond.stage.DesmondExtend'>: {}, <class 'schrodinger.application.desmond.stage.FepanaJob'>: {'id': None}, <class 'schrodinger.application.desmond.stage.CovalentFepMapper'>: {}, <class 'schrodinger.application.desmond.stage.Analysis'>: {}, <class 'schrodinger.application.desmond.stage.Stop'>: {}, <class 'schrodinger.application.desmond.stage.AssignForcefield'>: {}, <class 'schrodinger.application.desmond.stage.Primer'>: {}, <class 'schrodinger.application.desmond.stage.LambdaHopping'>: {}}

static serialize(fh)

class schrodinger.application.desmond.picklejar.PickleState

Bases: object