|
|
| does_ct_overlap_split_at(ct2d,
all_atom_connections,
idx1,
idx2,
bond_to_ring,
parameters,
debug=False) |
|
|
|
|
| does_ct_overlap(ct2d,
all_atom_connections,
bond_to_ring,
all_bonds,
parameters,
debug=False) |
|
|
|
|
| residue_outside_of_image(pt_in_screen,
residue_radius,
final_image_dim) |
|
|
|
|
residue_overlaps_ligand_or_label(res_uid,
all_ligand_bonds,
all_ligand_atom_placements,
res_pt_in_screen,
residue_radius,
final_image_dim,
ligand_rings,
debug=False,
parameters={}) |
|
|
|
|
| residue_overlaps_hbond_or_pipi(res_uid,
res_placements,
new_pt1,
residue_radius,
final_image_dim,
all_hbonds,
all_pipi_stacking,
all_picats,
return_from=False) |
|
|