search_antibody(light_seq,
heavy_seq,
database,
criteria=None,
viewer=None)
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Searches the database for a matching antibody to the
sequence supplied.
- Parameters:
light_seq (str) - The text representation of a sequence such as obtained from the
schrodinger.ui.sequencealignment.sequence.Sequence.text
method. This should be for the light variable regionheavy_seq (str) - The text representation of a sequence such as obtained from the
schrodinger.ui.sequencealignment.sequence.Sequence.text
method This should be for the heavy variable regioncriteria (list) - list of String, Numerical and Boolean schrodinger.application.bioluminate.propfilter.Criterion
objects obtained from the schrodinger.application.bioluminate.propfilter
for limited the antibodies searched in the databasedatabase (schrodinger.application.prime.packages.PrimeStructureDatabase.PrimeStructureDB) - The database to searchviewer (schrodinger.application.bioluminate.ssv.viewer.SimplifiedSequenceViewer
or None) - The SimplifiedSequenceViewer viewer to place results in. If
None, no SSV will be used. - Returns: list
- List of results, each item is a FrameworkTemplate object
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