Package schrodinger :: Package application :: Package jaguar :: Module autots_constants
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Module autots_constants

Variables [hide private]
  doc = ' some constants used in AutoTS '
  VERSION = '2017-2'
  PRODUCT_NAME = 'AutoTS'
  COLOR = 'i_m_color'
  JAGUAR_INPUT_FILE = 's_j_Jaguar_input_file'
  JAGUAR_OUTPUT_FILE = 's_j_Jaguar_output_file'
  JAGUAR_VIB_FILE = 's_j_Jaguar_vib_file'
  BOND_ACTIVE = 'b_j_reaction_bond_active'
  BOND_ORDER_ACTIVE = 'b_j_reaction_bond_order_active'
  DUMMY_ATOM = 'b_j_dummy_atom'
  REACTANT = 'b_j_reaction_reactant'
  PRODUCT = 'b_j_reaction_product'
  TS = 'b_j_reaction_transition_state'
  SUPERSYSTEM_INDEX = 'i_m_supersystem_index'
  CHARGE = 'i_j_reaction_charge'
  MULTIPLICITY = 'i_j_reaction_multiplicity'
  RENUMBERED = 'b_j_reaction_renumbered'
  CATEGORY_ORDER_1 = 's_j_reaction_category_1'
  CATEGORY_ORDER_2 = 's_j_reaction_category_2'
  CATEGORY_ORDER_3 = 's_j_reaction_category_3'
  MIN_CATEGORY_ORDER = 1
  MAX_CATEGORY_ORDER = 3
hash(x)
  CATEGORY_KEYS = ['s_j_reaction_category_1', 's_j_reaction_cate...
  TS_TEMPLATE_DATASET_FILE = 'REACTIQ_TEMPlATE_FILE'
  PI = 3.14159265359
  EV = 27.211385
  KCAL = 627.509469
  KJOULE = 2625.4996183
  BOHR = 0.52917721092
  CIRCLE_DEGREE = 360.0
  CIRCLE_RADIAN = 6.28318530718
  DEGREE = 57.2957795131
  BOLTZ = 3.116815e-06
  TEMPERATURE = 289.15
  HYDROGEN_REPLACEMENTS = [3, 9, 11, 17, 19, 35, 37, 53, 55, 85]
  PROPERTY_KEY_CHARGE = 'i_m_Molecular_charge'
  PROPERTY_KEY_MULT = 'i_m_Spin_multiplicity'
  PROPERTY_KEY_TITLE = 's_m_title'
  PROPERTY_KEY_ENTRY = 's_m_entry_name'
  PROPERTY_KEY_CP_TYPE = 's_j_Critical_Point_Type'
  PROPERTY_KEY_INF_SEP_ENERGY = 'r_j_Inf_Sep_Energy'
  PROPERTY_KEY_INF_SEP_FREE_ENERGY = 'r_j_Inf_Sep_Free_Energy'
  PROPERTY_KEY_LOC_ENERGY = 'r_j_LOC_Energy'
  PROPERTY_KEY_ENERGY = 'r_j_Gas_Phase_Energy'
  PROPERTY_KEY_GAS_PHASE_ENERGY = 'r_j_Gas_Phase_Energy'
  PROPERTY_KEY_SOLUTION_PHASE_ENERGY = 'r_j_Solution_Phase_Energy'
  PROPERTY_KEY_FREE_ENERGY = 'r_j_Total_Free_Energy_at_298.15K_(...
  PROPERTY_KEY_TRANSITION_FREQUENCY = 'r_j_transition_frequency'
  PROPERTY_KEY_TRANSITION_VECTOR = 'i_j_transition_vector'
  PROPERTY_KEY_IRC_REACTANT = 's_j_IRC_Reactant_Hash'
  PROPERTY_KEY_IRC_PRODUCT = 's_j_IRC_Product_Hash'
  PROPERTY_KEY_HASH = 's_j_Hash'
  VDWSCALE = 0.7
  MIMICK_REACTANT = 1
  MIMICK_PRODUCT = 2
  MIMICK_BOTH = 3
hash(x)
  AUTOTS_ATOM_PROPERTIES = ['b_j_dummy_atom', 'i_m_supersystem_i...
  AUTOTS_BOND_PROPERTIES = ['b_j_reaction_bond_active', 'b_j_rea...
  AUTOTS_ST_PROPERTIES = ['s_j_Jaguar_input_file', 's_j_Jaguar_o...
  FRACTION_DIFFERENT = 0.5
  USE_CONSISTENTLY_ORDERED_CONFORMER_TEST = True
hash(x)
  __package__ = 'schrodinger.application.jaguar'
Variables Details [hide private]

CATEGORY_KEYS

Value:
['s_j_reaction_category_1',
 's_j_reaction_category_2',
 's_j_reaction_category_3']

PROPERTY_KEY_FREE_ENERGY

Value:
'r_j_Total_Free_Energy_at_298.15K_(au)'

AUTOTS_ATOM_PROPERTIES

Value:
['b_j_dummy_atom', 'i_m_supersystem_index']

AUTOTS_BOND_PROPERTIES

Value:
['b_j_reaction_bond_active', 'b_j_reaction_bond_order_active']

AUTOTS_ST_PROPERTIES

Value:
['s_j_Jaguar_input_file',
 's_j_Jaguar_output_file',
 's_j_Jaguar_vib_file',
 'b_j_reaction_reactant',
 'b_j_reaction_product',
 'b_j_reaction_transition_state',
 'i_j_reaction_charge',
 'i_j_reaction_multiplicity',
...