Package schrodinger :: Package application :: Package matsci :: Module reordergui :: Class ReorderAtomsDialog

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Class ReorderAtomsDialog

       object --+                    
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sip.simplewrapper --+                
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          sip.wrapper --+            
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     PyQt5.QtCore.QObject --+        
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           object --+       |        
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    sip.simplewrapper --+   |        
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 PyQt5.QtGui.QPaintDevice --+        
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      PyQt5.QtWidgets.QWidget --+    
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          PyQt5.QtWidgets.QDialog --+
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                                   ReorderAtomsDialog

A Window-Modal dialog that allows the user to reorder atoms in a comparison structure based on a reference structure.

Nested Classes

Inherited from PyQt5.QtWidgets.QDialog: DialogCode

Inherited from PyQt5.QtWidgets.QWidget: RenderFlag, RenderFlags

Inherited from PyQt5.QtGui.QPaintDevice: PaintDeviceMetric

Instance Methods

__init__(self, struct1, struct2, accept_command=None, reject_command=None, modality=0, title='Reorder Atoms')
Create a ReorderAtomDialog instance

help(self)
Show the help topic for this panel

int or None

accept(self)
User has clicked accept, get the reordered structure, call the accept_command with it and close the dialog.

int

reject(self)
User has clicked reject - do nothing but call custom reject method

warning(self, msg)
Post a warning dialog

Inherited from PyQt5.QtWidgets.QDialog: accepted, closeEvent, contextMenuEvent, done, eventFilter, exec_, finished, isSizeGripEnabled, keyPressEvent, minimumSizeHint, open, rejected, resizeEvent, result, setModal, setResult, setSizeGripEnabled, setVisible, showEvent, sizeHint

Inherited from PyQt5.QtWidgets.QWidget: acceptDrops, accessibleDescription, accessibleName, actionEvent, actions, activateWindow, addAction, addActions, adjustSize, autoFillBackground, backgroundRole, baseSize, changeEvent, childAt, childrenRect, childrenRegion, clearFocus, clearMask, close, contentsMargins, contentsRect, contextMenuPolicy, create, createWindowContainer, cursor, customContextMenuRequested, destroy, devType, dragEnterEvent, dragLeaveEvent, dragMoveEvent, dropEvent, effectiveWinId, ensurePolished, enterEvent, event, find, focusInEvent, focusNextChild, focusNextPrevChild, focusOutEvent, focusPolicy, focusPreviousChild, focusProxy, focusWidget, font, fontInfo, fontMetrics, foregroundRole, frameGeometry, frameSize, geometry, getContentsMargins, grab, grabGesture, grabKeyboard, grabMouse, grabShortcut, graphicsEffect, graphicsProxyWidget, hasFocus, hasHeightForWidth, hasMouseTracking, height, heightForWidth, hide, hideEvent, initPainter, inputMethodEvent, inputMethodHints, inputMethodQuery, insertAction, insertActions, isActiveWindow, isAncestorOf, isEnabled, isEnabledTo, isFullScreen, isHidden, isLeftToRight, isMaximized, isMinimized, isModal, isRightToLeft, isVisible, isVisibleTo, isWindow, isWindowModified, keyReleaseEvent, keyboardGrabber, layout, layoutDirection, leaveEvent, locale, lower, mapFrom, mapFromGlobal, mapFromParent, mapTo, mapToGlobal, mapToParent, mask, maximumHeight, maximumSize, maximumWidth, metric, minimumHeight, minimumSize, minimumWidth, mouseDoubleClickEvent, mouseGrabber, mouseMoveEvent, mousePressEvent, mouseReleaseEvent, move, moveEvent, nativeEvent, nativeParentWidget, nextInFocusChain, normalGeometry, overrideWindowFlags, overrideWindowState, paintEngine, paintEvent, palette, parentWidget, pos, previousInFocusChain, raise_, rect, releaseKeyboard, releaseMouse, releaseShortcut, removeAction, render, repaint, resize, restoreGeometry, saveGeometry, scroll, setAcceptDrops, setAccessibleDescription, setAccessibleName, setAttribute, setAutoFillBackground, setBackgroundRole, setBaseSize, setContentsMargins, setContextMenuPolicy, setCursor, setDisabled, setEnabled, setFixedHeight, setFixedSize, setFixedWidth, setFocus, setFocusPolicy, setFocusProxy, setFont, setForegroundRole, setGeometry, setGraphicsEffect, setHidden, setInputMethodHints, setLayout, setLayoutDirection, setLocale, setMask, setMaximumHeight, setMaximumSize, setMaximumWidth, setMinimumHeight, setMinimumSize, setMinimumWidth, setMouseTracking, setPalette, setParent, setShortcutAutoRepeat, setShortcutEnabled, setSizeIncrement, setSizePolicy, setStatusTip, setStyle, setStyleSheet, setTabOrder, setToolTip, setToolTipDuration, setUpdatesEnabled, setWhatsThis, setWindowFilePath, setWindowFlags, setWindowIcon, setWindowIconText, setWindowModality, setWindowModified, setWindowOpacity, setWindowRole, setWindowState, setWindowTitle, sharedPainter, show, showFullScreen, showMaximized, showMinimized, showNormal, size, sizeIncrement, sizePolicy, stackUnder, statusTip, style, styleSheet, tabletEvent, testAttribute, toolTip, toolTipDuration, underMouse, ungrabGesture, unsetCursor, unsetLayoutDirection, unsetLocale, update, updateGeometry, updateMicroFocus, updatesEnabled, visibleRegion, whatsThis, wheelEvent, width, winId, window, windowFilePath, windowFlags, windowHandle, windowIcon, windowIconChanged, windowIconText, windowIconTextChanged, windowModality, windowOpacity, windowRole, windowState, windowTitle, windowTitleChanged, windowType, x, y

Inherited from PyQt5.QtCore.QObject: __getattr__, blockSignals, childEvent, children, connectNotify, customEvent, deleteLater, destroyed, disconnect, disconnectNotify, dumpObjectInfo, dumpObjectTree, dynamicPropertyNames, findChild, findChildren, inherits, installEventFilter, isSignalConnected, isWidgetType, isWindowType, killTimer, metaObject, moveToThread, objectName, objectNameChanged, parent, property, pyqtConfigure, receivers, removeEventFilter, sender, senderSignalIndex, setObjectName, setProperty, signalsBlocked, startTimer, thread, timerEvent, tr

Inherited from PyQt5.QtGui.QPaintDevice: colorCount, depth, devicePixelRatio, devicePixelRatioF, devicePixelRatioFScale, heightMM, logicalDpiX, logicalDpiY, paintingActive, physicalDpiX, physicalDpiY, widthMM

Inherited from sip.simplewrapper: __new__

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables

Inherited from PyQt5.QtWidgets.QDialog: Accepted, Rejected

Inherited from PyQt5.QtWidgets.QWidget: DrawChildren, DrawWindowBackground, IgnoreMask

Inherited from PyQt5.QtCore.QObject: staticMetaObject

Inherited from PyQt5.QtGui.QPaintDevice: PdmDepth, PdmDevicePixelRatio, PdmDevicePixelRatioScaled, PdmDpiX, PdmDpiY, PdmHeight, PdmHeightMM, PdmNumColors, PdmPhysicalDpiX, PdmPhysicalDpiY, PdmWidth, PdmWidthMM

Properties

Inherited from object: __class__

Method Details

init(self, struct1, struct2, accept_command=None, reject_command=None, modality=0, title=`'Reorder Atoms'`)
(Constructor)

Create a ReorderAtomDialog instance

Parameters:

struct1 (schrodinger.structure.Structure) - The reference structure. This structure will not be reordered.
struct2 (schrodinger.structure.Structure) - The comparison structure. A copy of this structure will be reordered when the user clicks OK
accept_command (callable) - The command to call with the reordred structure when the user clicks OK. This command should accept two paramters, the reordered structure, and a list. The index of the list is the atom.index-1 of an atom in the reordered structure. The item at that index is the atom.index of the same atom in the original comparison structure.
accept_command (callable) - The command to call when the user clicks Cancel - takes no parameters
modality (int) - The modality of the dialog. Default is Qt.NonModal, other options may be Qt.WindowModal or Qt.ApplicationModal.
title (str) - The window title
reject_command (callable)

Overrides: object.__init__

accept(self)

User has clicked accept, get the reordered structure, call the accept_command with it and close the dialog.

Returns: int or None: QDialog.Accepted if a structure has been reordered, or None if the reordering was incomplete and the dialog not closed
Overrides: PyQt5.QtWidgets.QDialog.accept

reject(self)

User has clicked reject - do nothing but call custom reject method

Returns: int: QDialog.Reject
Overrides: PyQt5.QtWidgets.QDialog.reject

warning(self, msg)

Post a warning dialog

Parameters:

msg (str) - The message to display