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SequenceAlignmentModel A QTable model where each row corresponds to a sequence and each column corresponds to a residue position |
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| AbstractSignalMixinMetaclass | |||
| ProxyMixinMetaclass | |||
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ProxyMixin A mixin class that provides functionality common to all the proxies. |
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NonNestedProxy A base class for proxy models that don't contain any nesting (i.e. |
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NestedProxy A base class for proxy models that contain one level of nesting. |
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ReorderingProxyModel A proxy for reordering rows in response to either sorting or drag and drop actions. |
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PostReorderingProxyMixin A mixin for all proxies that are used after the ReorderingProxyModel. |
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SequenceNums SequenceNums(all, structured_only) |
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SequenceInfo Information about a single sequence. |
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GroupByAnnotationInfo Information about a sequence annotation. |
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AnnotationProxyModel A proxy model that creates children rows for currently displayed annotations and adds a spacer row in between sequences. |
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| GroupExpansionProxyMixinMetaclass | |||
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GroupExpansionProxyMixin A mixin for tree models that transmit group expansion information to their view. |
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| PostAnnotationProxyMixinMetaclass | |||
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PostAnnotationProxyMixin A mixin for all proxies that are used after the AnnotationProxyModel. |
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RowWrapInsertingRows An object to store RowWrapProxyModel bookkeeping for the insertion of top-level rows. |
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RowWrapRemovingRows An object to store RowWrapProxyModel bookkeeping for the removal of top-level rows. |
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RowWrapInsertingChildRows An object to store RowWrapProxyModel bookkeeping for the insertion of child rows. |
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RowWrapRemovingChildRows An object to store RowWrapProxyModel bookkeeping for the removal of child rows. |
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RowWrapProxyModel A proxy model that wraps rows to a specified column count. |
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_ToggleProxyModel A model that can be toggled between row wrapping (by setting the source to a RowWrapProxyModel) and non-row-wrapping (by setting the source to an AnnotationFilterProxyModel).
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| ToggleProxyModelCachingLayer | |||
| ToggleProxyModel | |||
| PostStyleProxyMixinMetaclass | |||
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PostStyleProxyMixin A mixin for all proxies that are used after the AnnotationProxyModel. |
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ExportProxyModel A proxy for use when generating a static image of the table. |
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ViewModel An abstraction layer for the various table models in this module |
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AlignmentMetricOption This class returns a given alignment metric option, sets it to a desired boolean value and invalidates the filters for the proxy model. |
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FixedColumn A table column that is fixed on the left or right of the scrollable columns. |
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BaseAdjacentAlignmentProxyModel A base proxy model to be subclassed by other proxy models that show data related to and synchronized with an alignment but in separate, adjacent views. |
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AlignmentInclusionProxyModel A proxy model that contains sequence inclusion for an alignment along with sequence title and chain information. |
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AlignmentMetricsProxyModel A proxy model that contains the alignment metrics, such as percentage of identity, similarity, homology and score to the reference sequence. |
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AlignmentMetricsFilterProxy A filter proxy that displays or hides alignment metric columns. |
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RowOrder A tuple that represents the current state of the table sorting and row ordering. |
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