Package schrodinger :: Package application :: Package phase :: Module phase_markers :: Class PhaseSphereMarkers

Class PhaseSphereMarkers

object --+
         |
        PhaseSphereMarkers

Known Subclasses:

Base class that defines group of sphere markers.

Instance Methods

[hide private]

__init__(self, entry_id)
Marker initializer.

addSphere(self, xyz, radius)
Adds spehere to marker group.

setSphereRadiusAndCoords(self, sphere_index, r, x, y, z)
Sets sphere radius and coordinates.

removeSpheres(self, sphere_indices)
Removes spheres from the group.

setSelected(self, sphere_indices)
Shows the specified spheres as selected (with a glow effect).

resetSelected(self)
Resets current selection.

show(self)
Show all spheres for this group.

hide(self)
Hide all spheres for this group.

clear(self)
Deletes all spheres for this group.

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables

[hide private]

SPHERE_COLOR = (1.0, 1.0, 0.0)

SELECTED_COLOR = (0.25, 0.5, 0.95)

SPHERE_OPACITY = 0.1

SPHERE_RESOLUTION = 20

ANGLE_DEP_TRANSPARENCY = True
hash(x)

next_sphere_id = 1

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, entry_id)
(Constructor)

Marker initializer.

Parameters:

entry_id (int) - hypothesis entry ID

Overrides: object.__init__

addSphere(self, xyz, radius)

Adds spehere to marker group.

Parameters:

xyz ((float, float, float)) - sphere coordinates
radius (float) - sphere radius

setSphereRadiusAndCoords(self, sphere_index, r, x, y, z)

Sets sphere radius and coordinates.

Parameters:

sphere_index (int) - index of sphere in self.spheres list
r (float) - sphere radius
x - sphere x-coordinate
x - float
y - sphere y-coordinate
y - float
z - sphere z-coordinate
z - float

removeSpheres(self, sphere_indices)

Removes spheres from the group.

Parameters:

sphere_indices (list) - list of indices to the self.sphere list

setSelected(self, sphere_indices)

Shows the specified spheres as selected (with a glow effect).

Parameters:

sphere_indices (list) - list of indices to the self.sphere list

Class PhaseSphereMarkers

__init__(self, entry_id) (Constructor)

addSphere(self, xyz, radius)

setSphereRadiusAndCoords(self, sphere_index, r, x, y, z)

removeSpheres(self, sphere_indices)

setSelected(self, sphere_indices)

init(self, entry_id)
(Constructor)