Trees | Indices | Help |
|
---|
|
object --+ | PIPERDistanceConstraintPair
Object used to store the pairs of residues and the allowable distaances between them that make up a piper distance constraint.
|
|||
|
|||
|
|||
|
|||
|
|||
|
|||
|
|||
Inherited from |
|
|||
|
Initialize with: rec_asl {string} REQUIRED ASL espression corresponding to eactly one residue on the receptor lig_asl {string} REQUIRED ASL espression corresponding to eactly one residue on the ligand dmin {float} minimum allowed distance between any two atoms on the residues defined by rec_asl and lig_asl dmax {float} maximum allowed distance between any two atoms on the residues defined by rec_asl and lig_asl
|
str(x)
|
This must be called to set link the asl expresion given in the initializer to a set of structures rec_st { schrodinger.Structure} receptor structure lig_st { schrodinger.Structure} receptor structure If the ASL expression provided in the initializer does not correspond to exactly one residue in rec_st and lig_st respectively than a RuntimeError is raised |
Return the dictionary that will be used to create the piper-backend-formatted json file. This format is different than the json format used to pass constraint objects to the schrodinger-wrapper for Prime as that json file must include distance and energy-based constraints. |
Trees | Indices | Help |
|
---|
Generated by Epydoc 3.0.1 on Tue May 2 06:33:03 2017 | http://epydoc.sourceforge.net |