Find the reactive residues on a protein based on sequence
patterns.
|
|
__init__(self,
st,
search_pre_defined=True,
custom_patterns=[]) |
|
|
|
|
generateCSVTable(self)
Analyze the given structure and return the results summary in a CSV
table |
|
|
|
|
iterateResidues(self)
Iterate over all residues and yield ResidueData objects (or None if
the residue is not reactive) Note that one residue can be multiple
reactive types and yielded multiple times |
|
|
|
|
_checkGroupForTypes(self,
pre_resname,
curr_resname,
next_resname)
Return a list of reactive residue types for residue
"curr_resname" ("pre_resname" for Glycosylation). |
|
|
|
|
getNumResidues(self)
return the total number of residues in the sequences that will be
analyzed. |
|
|