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2014-2 Schrodinger Python API
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I
i
(in
schrodinger.application.desmond.predict_remd_temp
)
initEntry()
(in
DrawSolventPanel
)
is_anchor_atom()
(in
schrodinger.application.desmond.fepdiff
)
i
(in
schrodinger.application.macromodel.input
)
initExtMSJ()
(in
Workunit
)
is_another_best_config()
(in
SimulatedAnnealing
)
i1
(in
_FFIODihedral
)
initial
(in
Scan
)
is_atom_list()
(in
schrodinger.utils.sea
)
i1
(in
_FFDihedral
)
INITIAL_FRAG_LIST
(in
_Pert
)
IS_CANVAS_LIC_CHECKED
(in
schrodinger.application.moldescriptors.impl
)
I_C_ATTACH
(in
schrodinger.application.desmond.fep_gui
)
INITIAL_GUESS_OPTS
(in
ScfTab
)
is_cartesian_toggle()
(in
_Flex
)
I_LIGAND
(in
schrodinger.application.desmond.fep_gui
)
INITIAL_HESSIAN
(in
OptimizationTab
)
is_csv_file()
(in
schrodinger.utils.fileutils
)
I_S_ATOM_MUTATE
(in
schrodinger.application.desmond.fep_gui
)
initialise()
(in
McproSystemBuilder
)
is_debugging
(in
schrodinger.application.desmond.simulation_block_data
)
I_S_ATTACH
(in
schrodinger.application.desmond.fep_gui
)
initialize()
(in
MmJag
)
is_debugging
(in
schrodinger.application.desmond.simulation_block_test
)
I_SUBST
(in
schrodinger.application.desmond.fep_gui
)
initialize()
(in
ModelSystemPanel
)
is_done
(in
TestJob
)
ibit
(in
BitArray
)
initialize()
(in
_ChopCap
)
is_ecp
(in
_BasisSet
)
icon
(in
schrodinger.application.desmond
)
initialize()
(in
_FileSelection
)
is_empty()
(in
schrodinger.test.stu.outcomes.compare_csv'
)
icons
(in
schrodinger.application.bioluminate.actions
)
initialize()
(in
_Flex
)
is_equal()
(in
schrodinger.utils.sea
)
Icons
(in
schrodinger.maestro.markers
)
initialize()
(in
_Import
)
IS_FALSE
(in
schrodinger.application.bioluminate.propfilter
)
Icosahedron
(in
schrodinger.graphics3d.polyhedron
)
initialize()
(in
_Monitor
)
is_ffio_funct()
(in
schrodinger.application.desmond.fepdiff
)
ID
(in
schrodinger.application.desmond.antlr3.treewizard
)
initialize()
(in
_Neut
)
is_from_atom()
(in
TempAtom
)
id
(in
FepJob
)
initialize()
(in
_SysSpec
)
is_function_registered()
(in
schrodinger.maestro.maestro
)
id
(in
FepanaJob
)
initialize()
(in
Bitset
)
is_good()
(in
JobStatus
)
ID
(in
SelectedEntriesColumns
)
initialize()
(in
Initializer
)
is_halogen
(in
_StructureAtom
)
ID
(in
SelectedEntriesColumnsHB
)
initialize()
(in
mmlist
)
is_leaf()
(in
Node
)
ID
(in
SelectedEntriesColumnsPka
)
initialize()
(in
Table
)
is_license_available()
(in
schrodinger.utils.license
)
ideal_bond_angles
(in
schrodinger.protein.analysis_params
)
initialize()
(in
Project
)
is_maestro_elements()
(in
schrodinger.maestro.maestro
)
ideal_bond_lengths
(in
schrodinger.protein.analysis_params
)
initialize()
(in
Minimizer
)
is_maestro_file()
(in
schrodinger.utils.fileutils
)
IDENT
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
initialize()
(in
schrodinger.structutils.minimize
)
is_meta()
(in
schrodinger.application.desmond.config
)
IDENT
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
initialize_cached_data()
(in
HuntCache
)
is_metal()
(in
schrodinger.application.prime.primefix
)
identical_mapping()
(in
schrodinger.application.desmond.fepdiff
)
initialize_res_placements_to_screen()
(in
schrodinger.application.lid.ligand_interaction_diagram
)
is_metal()
(in
schrodinger.protein.findhets
)
identifier
(in
StatisticalSummary
)
initialize_score_storage()
(in
hbond_cluster
)
is_minimize()
(in
schrodinger.application.desmond.config
)
identify_all_hbonders()
(in
ProtAssign
)
initializeGrowers()
(in
SimpleEnumDockPanel
)
is_mopac_file()
(in
schrodinger.application.mopac
)
identify_species()
(in
ProtAssign
)
initializeMmlibs()
(in
Ionizer
)
is_normal_bridge_atom()
(in
schrodinger.application.desmond.fepdiff
)
identifyGroups()
(in
AssignBondOrders
)
initializeProgram()
(in
TokenRewriteStream
)
is_ok()
(in
_Evalor
)
identityMat
(in
schrodinger.application.lid.ligand_interaction_diagram_gui
)
Initializer
(in
schrodinger.infra.mminit
)
is_open()
(in
ifstream
)
IF
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
initializer
(in
_StructureDeleter
)
is_open()
(in
ofstream
)
IF
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
initializeWorkunit()
(in
Baseunit
)
is_open()
(in
ifstream
)
If
(in
schrodinger.application.desmond.enhsamp
)
initialSolution()
(in
DEE_EnergyMatrix
)
is_open()
(in
ofstream
)
if_()
(in
mexpParser
)
INITKER
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
is_opls2_available()
(in
schrodinger.utils.license
)
if__return
(in
mexpParser
)
INITKER
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
is_parent()
(in
schrodinger.application.desmond.util
)
ifstream
(in
schrodinger.infra.mmgpgpu
)
initLastLambdaStage()
(in
Workunit
)
is_poseviewer_file()
(in
schrodinger.utils.fileutils
)
ifstream
(in
schrodinger.infra.mmsurf
)
initPrepDir()
(in
Workflow
)
is_powerof2()
(in
schrodinger.application.desmond.mdkey
)
ifstream_close()
(in
schrodinger.infra._mmgpgpu
)
initStyleOption()
(in
sketcherGUIMultiColumnToolBar
)
is_powerof2()
(in
schrodinger.application.desmond.util
)
ifstream_is_open()
(in
schrodinger.infra._mmgpgpu
)
inject_atom_grp()
(in
_AtomGroup
)
is_powerof2()
(in
schrodinger.utils.sea
)
ifstream_swiginit()
(in
schrodinger.infra._mmgpgpu
)
inject_atom_grp()
(in
_AtomGroup
)
is_ps
(in
_BasisSet
)
ifstream_swigregister()
(in
schrodinger.infra._mmgpgpu
)
inject_atom_grp()
(in
schrodinger.application.desmond.mdkey
)
is_pv_file()
(in
schrodinger.application.glide.poseviewconvert
)
ignore_project_close()
(in
schrodinger.maestro.maestro
)
inject_macro()
(in
Key
)
is_remd()
(in
schrodinger.application.desmond.config
)
ignore_project_update()
(in
schrodinger.maestro.maestro
)
inject_restr()
(in
_AtomGroup
)
is_restartable_version()
(in
schrodinger.application.desmond.cmj
)
ignore_workspace_changed()
(in
schrodinger.maestro.maestro
)
inject_restr()
(in
_AtomGroup
)
is_retriable()
(in
JobStatus
)
ignoreCheckboxChanged()
(in
ExceptionDialog
)
inject_restr()
(in
schrodinger.application.desmond.mdkey
)
is_ring_atom()
(in
schrodinger.application.desmond.r_group_asl
)
IGNORED_SWIG_FUNCTIONS
(in
schrodinger.infra.mmcheck
)
INORGANIC
(in
schrodinger.application.bioluminate.pml_menus
)
is_ring_bridge_atom()
(in
schrodinger.application.desmond.fepdiff
)
ignoreEvent()
(in
PropertySelectorMenu
)
inp_content
(in
schrodinger.application.desmond.simulation_block_test
)
is_ring_open_or_closed()
(in
schrodinger.application.desmond.fep_mapping
)
IgnoreProjectClose
(in
schrodinger.maestro.maestro
)
inp_file
(in
schrodinger.application.desmond.simulation_block_test
)
is_root()
(in
Node
)
IgnoreProjectUpdate
(in
schrodinger.maestro.maestro
)
INPLACE_PROPERTY
(in
SiteMatchLookup
)
is_rotabond()
(in
schrodinger.application.desmond.r_group_asl
)
IgnoreWorkspaceChanged
(in
schrodinger.maestro.maestro
)
input
(in
schrodinger.application.jaguar
)
is_same()
(in
Restrain
)
IMAGGLASS
(in
Icons
)
input
(in
schrodinger.application.macromodel
)
is_sd_file()
(in
schrodinger.utils.fileutils
)
IMIDAZOLE
(in
schrodinger.structutils.interactions
)
input
(in
schrodinger.application.prime
)
is_selected
(in
ProjectRow
)
IMIDAZOLE
(in
schrodinger.structutils.interactions.pi
)
input
(in
schrodinger.application.qsite
)
is_shown()
(in
NewEntry
)
IMPACT
(in
schrodinger.infra.mm
)
input
(in
schrodinger.application.vsw
)
is_shown()
(in
NewEntryGroup
)
IMPACT
(in
schrodinger.utils.preferences
)
input
(in
schrodinger.pipeline
)
is_shown_only()
(in
NewEntryGroup
)
IMPACT_MAIN
(in
schrodinger.infra.mm
)
input_cns
(in
schrodinger.application.desmond.cns_io
)
is_smiles_file()
(in
schrodinger.utils.fileutils
)
IMPACT_MAX_BASE_LENGTH
(in
schrodinger.infra.mm
)
input_geometry_re
(in
schrodinger.application.jaguar.output
)
is_subdir()
(in
schrodinger.application.desmond.util
)
IMPACT_MAX_EXT_LENGTH
(in
schrodinger.infra.mm
)
input_group_ui
(in
schrodinger.application.desmond
)
is_triclinic_box()
(in
schrodinger.application.desmond.config
)
IMPACT_MAX_LINE_LENGTH
(in
schrodinger.infra.mm
)
input_hb_bottom_ui
(in
schrodinger.application.jaguar.gui.ui
)
is_triclinic_box()
(in
schrodinger.application.desmond.mdkey
)
impl
(in
schrodinger.application.moldescriptors
)
input_menu_changed()
(in
App
)
IS_TRUE
(in
schrodinger.application.bioluminate.propfilter
)
import_all_data()
(in
ImportSumfile
)
input_menu_changedOLD()
(in
App
)
is_valid()
(in
AslValidator
)
import_canvas()
(in
schrodinger.application.canvas.r_group
)
input_pka_bottom_ui
(in
schrodinger.application.jaguar.gui.ui
)
is_valid_jobname()
(in
schrodinger.utils.fileutils
)
import_canvas2d()
(in
schrodinger.application.canvas.r_group
)
input_std_bottom_ui
(in
schrodinger.application.jaguar.gui.ui
)
is_vrun()
(in
schrodinger.application.desmond.config
)
import_display_update()
(in
ModelSystemPanel
)
input_tab
(in
schrodinger.application.jaguar.gui.tabs
)
is_water()
(in
schrodinger.application.desmond.remd
)
import_file()
(in
schrodinger.protein.getpdb
)
input_tab_widgets
(in
schrodinger.application.jaguar.gui
)
is_watermap_type()
(in
schrodinger.application.lid.ligand_interaction_diagram
)
import_lig()
(in
_Import
)
input_tab_widgets_hb
(in
schrodinger.application.jaguar.gui
)
isaFrameSetDirectory()
(in
schrodinger.application.desmond.framesettools
)
import_module_from_file()
(in
schrodinger.utils.imputils
)
input_tab_widgets_pka
(in
schrodinger.application.jaguar.gui
)
isAllowedSmartsPattern()
(in
_StructureFragmenter
)
import_pdb()
(in
schrodinger.protein.getpdb
)
input_top_ui
(in
schrodinger.application.jaguar.gui.ui
)
isAromatic()
(in
_Ring
)
import_perturbations()
(in
schrodinger.application.mcpro.perturbations
)
inputconfig
(in
schrodinger.application
)
isAtomAromatic()
(in
AssignBondOrders
)
import_prot()
(in
_Import
)
InputConfig
(in
schrodinger.application.inputconfig
)
isAtomBetweenTwoRings()
(in
AssignBondOrders
)
import_psutil()
(in
schrodinger.test.stu.run
)
InputFiles
(in
Job
)
isAtomBoundToAromaticRing()
(in
AssignBondOrders
)
import_reflig()
(in
_Import
)
InputGroup
(in
schrodinger.application.desmond.gui
)
isAtomInRing()
(in
AssignBondOrders
)
import_std_file()
(in
_PropertyCompare
)
InputGroup
(in
schrodinger.application.desmond.gui_v2
)
isAtomInSmallRing()
(in
AssignBondOrders
)
IMPORT_STRUCTURES
(in
schrodinger.application.bioluminate.actions.configs
)
inputMethodEvent()
(in
sketcher
)
isBondRingEdge()
(in
AssignBondOrders
)
IMPORT_TOOLBAR
(in
ViewerWindow
)
inputMethodEvent()
(in
sketcherAtom
)
isChanged()
(in
CfgAtom
)
import_zmat()
(in
_Import
)
inputMethodEvent()
(in
sketcherBond
)
isChanged()
(in
Key
)
importCombLibSelectFile()
(in
SimpleEnumDockPanel
)
inputMethodEvent()
(in
sketcherGUIMultiColumnToolBar
)
IsCompatible()
(in
_VDAxis
)
importFilterFile()
(in
LigfilterFrame
)
inputMethodEvent()
(in
sketcherGraphicalObject
)
IsCompatible()
(in
_VDCoordinateFrame
)
importFragmentCollection()
(in
SimpleEnumDockPanel
)
inputMethodEvent()
(in
sketcherResidue
)
IsCompatible()
(in
VolumeData
)
importFromFile()
(in
SimplifiedSequenceViewer
)
inputMethodEvent()
(in
sketcherResidueInteraction
)
isComplete()
(in
Job
)
importFromFilePaths()
(in
SimplifiedSequenceViewer
)
inputMethodEvent()
(in
sketcherScene
)
isComplete()
(in
BaseJob
)
importFromMaestro()
(in
SimplifiedSequenceViewer
)
inputMethodEvent()
(in
sketcherView
)
isComplete()
(in
JobDJ
)
importFromPDB()
(in
SimplifiedSequenceViewer
)
inputMethodQuery()
(in
sketcherAtom
)
isConformationalSearchesChecked()
(in
InputTabPka
)
importFromProjectTable()
(in
SimplifiedSequenceViewer
)
inputMethodQuery()
(in
sketcherBond
)
isConformationalSearchesChecked()
(in
MoleculeTabPka
)
importFromWorkspace()
(in
SimplifiedSequenceViewer
)
inputMethodQuery()
(in
sketcherGraphicalObject
)
isConnectedToResidue()
(in
_Residue
)
importName()
(in
schrodinger.pipeline.pipeline
)
inputMethodQuery()
(in
sketcherResidue
)
isDarwin
(in
_SysInfo
)
importPalette()
(in
SimpleEnumDockPanel
)
inputMethodQuery()
(in
sketcherResidueInteraction
)
isDir()
(in
schrodinger.test.stu.outcomes.desmond
)
importReceptor()
(in
proteinHandler
)
InputMultiplicityMixin
(in
schrodinger.application.jaguar.gui.base_panel
)
isDynamic()
(in
FrameAslSelection
)
importRegion()
(in
FrameworkTemplate
)
inputsForStagesDefined()
(in
Pipeline
)
isDynamic()
(in
FrameIndexSelection
)
importRegion()
(in
FrameworkTemplate
)
inputState()
(in
JobInputFrame
)
isDynamic()
(in
FrameSliceSelection
)
importStructure()
(in
Project
)
InputTab
(in
schrodinger.application.jaguar.gui.tabs.input_tab
)
isDynamic()
(in
_AtomSelection
)
importStructureFile()
(in
Project
)
InputTabBase
(in
schrodinger.application.jaguar.gui.tabs.input_tab
)
isEmpty()
(in
FirstSecondaryStructure
)
ImportSumfile
(in
schrodinger.application.mcpro.read_output
)
InputTabHB
(in
schrodinger.application.jaguar.gui.tabs.input_tab
)
isEmpty()
(in
IntervalTree
)
ImportToolBar
(in
schrodinger.application.bioluminate.ssv.toolbars
)
InputTabJobMixin
(in
schrodinger.application.jaguar.gui.base_panel
)
isEmpty()
(in
SecondSecondaryStructure
)
ImportWidget
(in
schrodinger.application.bioluminate.bwidgets
)
InputTabMixin
(in
schrodinger.application.jaguar.gui.base_panel
)
isEmpty()
(in
sketcherScene
)
improper_torsion_data_set
(in
Report
)
InputTabPka
(in
schrodinger.application.jaguar.gui.tabs.input_tab
)
isEnclosedBy()
(in
IntervalTree
)
improper_torsions
(in
schrodinger.protein.analysis_params
)
inRing()
(in
Structure
)
isEnclosedByDetailed()
(in
IntervalTree
)
ImproperDualTupleDict
(in
schrodinger.application.desmond.fepdiff
)
inscode
(in
Cut
)
isEquivalent()
(in
GenOptions
)
improperfbhw()
(in
_FFIO
)
inscode
(in
_Residue
)
isEquivalent()
(in
Structure
)
ImproperTupleDict
(in
schrodinger.application.desmond.fepdiff
)
inscode
(in
_StructureAtom
)
isFastMode()
(in
InputTabHB
)
imputils
(in
schrodinger.utils
)
INSCODES
(in
schrodinger.protein.captermini
)
isFile()
(in
schrodinger.test.stu.outcomes.desmond
)
IN
(in
schrodinger.application.moldescriptors.impl
)
insert()
(in
SwigDoubleVector
)
isFilled()
(in
Grid
)
in_alpha
(in
schrodinger.application.lid.lid2d.draw
)
insert()
(in
SwigDoubleVector3
)
isFilled()
(in
PhaseDB
)
IN_COMPLEX
(in
schrodinger.application.desmond.fep_gui
)
insert()
(in
SwigIntVector
)
isFilled()
(in
PipeIO
)
in_dir()
(in
schrodinger.test.stu.workup
)
insert()
(in
SwigStringVector
)
isFilled()
(in
Structures
)
in_fname
(in
schrodinger.application.desmond.predict_remd_temp
)
insert()
(in
SwigUInt64Vector
)
isFilled()
(in
Text
)
in_fname
(in
schrodinger.application.desmond.reorder_atom
)
insert()
(in
SwigUnsignedIntVector
)
isfinite
(in
schrodinger.protein.assignment
)
in_maestro
(in
schrodinger.analysis.enrichment
)
insert()
(in
SwigUnsignedIntVector2
)
isGroupShown()
(in
Primitive
)
in_maestro
(in
schrodinger.ui.rama
)
insert()
(in
SwigVectorIntIntPair
)
isHeteroaromatic()
(in
_Ring
)
IN_PURE_SOLVENT
(in
schrodinger.application.desmond.fep_gui
)
insert()
(in
SwigDoubleVector
)
isInARing()
(in
sketcherAtom
)
IN_VACUUM
(in
schrodinger.application.desmond.fep_gui
)
insert()
(in
SwigDoubleVector3
)
isInDisplayedChain()
(in
HomologyRama
)
IN_WORKSPACE
(in
schrodinger.maestro.maestro
)
insert()
(in
SwigIntVector
)
isinf
(in
schrodinger.protein.assignment
)
IN_WORKSPACE
(in
schrodinger.project
)
insert()
(in
SwigStringVector
)
isInGuessMode()
(in
ReorderAtomFrame
)
in_workspace
(in
ProjectRow
)
insert()
(in
SwigUInt64Vector
)
isKekularizable()
(in
NanoTube
)
inBetween()
(in
schrodinger.application.lid.lid2d.utils
)
insert()
(in
SwigUnsignedIntVector
)
isKetoneCarbon()
(in
AssignBondOrders
)
InBounds()
(in
_VDAxis
)
insert()
(in
SwigUnsignedIntVector2
)
isKeyConsistentWithPanel()
(in
GuiApp
)
InBounds()
(in
_VDCoordinateFrame
)
insert()
(in
SwigVectorIntIntPair
)
isKeyConsistentWithPanel()
(in
GuiApp
)
InBounds()
(in
VolumeData
)
insert()
(in
MultiListbox
)
isLigand()
(in
sketcherAtom
)
incfg_file()
(in
JobInput
)
insert()
(in
ButtonBox
)
isLinux
(in
_SysInfo
)
include()
(in
AddDefinitionDialog
)
insert()
(in
NoteBook
)
isLst()
(in
TransitionStateTab
)
INCLUDE_USE_CONSISTENT_ORBITALS_CB
(in
ScfTab
)
insert()
(in
PanedWidget
)
isnan
(in
schrodinger.protein.assignment
)
INCLUDE_USE_CONSISTENT_ORBITALS_CB
(in
ScfTabConsistentOrbitals
)
insert()
(in
List
)
isNil()
(in
DebugTreeAdaptor
)
included
(in
EntrySurface
)
insertAfter()
(in
TokenRewriteStream
)
isNil()
(in
BaseTree
)
included_rows
(in
EntryGroup
)
insertBefore()
(in
TokenRewriteStream
)
isNil()
(in
BaseTreeAdaptor
)
included_rows
(in
Project
)
InsertBeforeOp
(in
schrodinger.application.desmond.antlr3.streams
)
isNil()
(in
CommonErrorNode
)
IncludeInSelection
(in
schrodinger.application.bioluminate.pml_menus
)
insertColumn()
(in
Table
)
isNil()
(in
CommonTree
)
includeOnly()
(in
ProjectRow
)
InsertPolicy
isNil()
(in
Tree
)
includes()
(in
Definition
)
insertRow()
(in
Table
)
isNil()
(in
TreeAdaptor
)
IncludeSubMenu
(in
schrodinger.application.bioluminate.pml_menus
)
insideRectangle()
(in
Rectangle
)
isNonDefault()
(in
JaguarInput
)
IncludeVisibleInSelection
(in
schrodinger.application.bioluminate.pml_menus
)
INSIDETHRESH
(in
Rectangle
)
isOnlySingleBonded()
(in
AssignBondOrders
)
INCLUSION
(in
SelectedEntriesColumns
)
inspectCheckpointFile()
(in
RestartWorkflow
)
isOrthogonal()
(in
HydrogenBondFinder
)
INCLUSION
(in
SelectedEntriesColumnsHB
)
install_information()
(in
schrodinger.test.performance
)
isOrthogonal()
(in
HydrophobicContactFinder
)
INCLUSION
(in
SelectedEntriesColumnsPka
)
install_opener()
(in
schrodinger.utils.urllib
)
isOrthogonal()
(in
ProtLigInteractionFinder
)
inContext()
(in
TreeParser
)
installPopUpEventFilter()
(in
_BasisSelectorPopUp
)
isOrthogonal()
(in
SaltBridgeFinder
)
INCORP_NAME
(in
_SdIncorpFrame
)
instance
(in
MainUI
)
isotope
(in
_StructureAtom
)
INCORP_VAL
(in
_SdIncorpFrame
)
instance()
(in
_BaseClient
)
isPopulated()
(in
FrameworkModel
)
incr()
(in
SwigPyIterator
)
int
isQueue()
(in
Host
)
incr()
(in
SwigPyIterator
)
INT
(in
schrodinger.utils.preferences
)
isQueued()
(in
Job
)
incr()
(in
SwigPyIterator
)
INT_RE
(in
schrodinger.test.stu.outcomes.desmond
)
isR()
(in
sketcherAtom
)
incr()
(in
SwigPyIterator
)
IntegrationTab
(in
schrodinger.application.desmond.gui
)
isRingAaromatic()
(in
AssignBondOrders
)
INCREMENT
(in
ScanCoordinateColumns
)
IntegrationTab
(in
schrodinger.application.desmond.gui_v2
)
isRowSelected()
(in
Table
)
increment_state_of_changeable()
(in
ProtAssign
)
INTERACTION_NAMES
(in
StructuralInteractionFingerprintGenerator
)
isSelected()
(in
_Cell
)
IncrementalTimer
(in
schrodinger.utils.timers
)
interactionfp
(in
schrodinger.structutils
)
isSelected()
(in
_Row
)
incrementAuxSelected()
(in
PropertySelector
)
interactions
(in
schrodinger.structutils
)
isShown()
(in
Primitive
)
IND
(in
schrodinger.application.ligprep.ionizer
)
InteractionTab
(in
schrodinger.application.desmond.gui
)
isStandardResidue()
(in
_Residue
)
IND2
(in
schrodinger.application.ligprep.ionizer
)
InteractionTab
(in
schrodinger.application.desmond.gui_v2
)
isStereogenic()
(in
sketcherAtom
)
IND3
(in
schrodinger.application.ligprep.ionizer
)
InterfaceMixin
(in
schrodinger.application.bioluminate.pml_menus
)
isTERZ()
(in
ResidueTools
)
IND4
(in
schrodinger.application.ligprep.ionizer
)
InterfacePreset
(in
schrodinger.application.bioluminate.pml_menus
)
istream
(in
schrodinger.infra.mmgpgpu
)
index
(in
_FEPIOSubBlock
)
interior()
(in
AppFramework
)
istream
(in
schrodinger.infra.mmsurf
)
index
(in
_FFIOSubBlock
)
interior()
(in
_ScrolledDouble
)
istream_eof()
(in
schrodinger.infra._mmgpgpu
)
index
(in
_OtherBlock
)
INTERVAL
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
istream_getline()
(in
schrodinger.infra._mmgpgpu
)
index
(in
Grow
)
INTERVAL
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
istream_read()
(in
schrodinger.infra._mmgpgpu
)
index
(in
ProjectRow
)
IntervalTree
istream_swigregister()
(in
schrodinger.infra._mmgpgpu
)
index
(in
_StructureAtom
)
intervaltree2d
(in
schrodinger.application.lid.lid2d
)
isUseConsistentOrbitalsChecked()
(in
ScfTabConsistentOrbitals
)
index
(in
_FFVirtual
)
IntervalTreeNode
isValid()
(in
BasisSelector
)
index()
(in
DebugTokenStream
)
IntStream
(in
schrodinger.application.desmond.antlr3.streams
)
isValid()
(in
BasisSelectorLineEdit
)
index()
(in
ANTLRStringStream
)
IntVar
(in
schrodinger.ui.widget.tkinterwidget
)
isValid()
(in
License
)
index()
(in
CommonTokenStream
)
invalid_code()
(in
schrodinger.protein.getpdb_utility
)
isValidAtomIndex()
(in
StructureFrame
)
index()
(in
IntStream
)
INVALID_NODE
(in
schrodinger.application.desmond.antlr3.tree
)
isVisible()
(in
sketcherAtom
)
index()
(in
CommonTreeNodeStream
)
INVALID_PROJECT_HANDLE
(in
schrodinger.project
)
isWindows
(in
_SysInfo
)
index()
(in
TreeWizard
)
INVALID_TABLE_HANDLE
(in
schrodinger.infra.table
)
isZwitterionChecked()
(in
InputTabPka
)
index()
(in
IndexDict
)
INVALID_TOKEN
(in
schrodinger.application.desmond.antlr3.tokens
)
isZwitterionChecked()
(in
MoleculeTabPka
)
index()
(in
TupleDict
)
INVALID_TOKEN_TYPE
(in
schrodinger.application.desmond.antlr3.constants
)
item_uri()
(in
_BaseClient
)
index()
(in
MultiListbox
)
InvalidProjectException
(in
schrodinger.project
)
itemAt()
(in
_StructViewItem
)
index_exp
(in
schrodinger.protein.assignment
)
InvalidProjectVersion
(in
schrodinger.project
)
itemChange()
(in
sketcherAtom
)
INDEX_PATTERN
(in
Key
)
INVERT
(in
schrodinger.project
)
itemChange()
(in
sketcherBond
)
INDEX_PATTERN
(in
Map
)
invert
(in
schrodinger.protein.assignment
)
itemChange()
(in
sketcherGraphicalObject
)
INDEX_PATTERN2
(in
Map
)
InvertCompleteSelection
(in
schrodinger.application.bioluminate.pml_menus
)
itemChange()
(in
sketcherResidue
)
indexChanged()
(in
AntibodyNumberingToolBar
)
invertSelection()
(in
WidgetTable
)
itemChange()
(in
sketcherResidueInteraction
)
IndexDict
(in
schrodinger.application.desmond.fepdiff
)
InvertSubMenu
(in
schrodinger.application.bioluminate.pml_menus
)
ItemIndexMethod
IndexMapper
(in
schrodinger.application.desmond.fepdiff
)
invoke()
(in
_ProtItem
)
items()
(in
PairDict
)
indexOfR()
(in
sketcher
)
invoke()
(in
_Callback
)
itemSelected()
(in
StructureListWidget
)
INDICES
(in
ConstraintCoordinateColumns
)
invokeJobIncorporation()
(in
_Callback
)
ITER
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
INDICES
(in
ScanCoordinateColumns
)
invokeSelectCallback()
(in
WidgetTable
)
ITER
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
indir
(in
schrodinger.application.lid.ligand_interaction_diagram_test
)
inWorkspace()
(in
ProjectRow
)
Iter
(in
schrodinger.application.desmond.enhsamp
)
INDXFMT
(in
schrodinger.infra.mm
)
io
(in
schrodinger.structutils
)
iter()
(in
mexpParser
)
Inf
(in
schrodinger.protein.assignment
)
IOCapture
(in
schrodinger.test.ioredirect
)
iter_return
(in
mexpParser
)
inf
(in
schrodinger.protein.assignment
)
ion_action
(in
ConsensusToolBar
)
iterate_to_convergence()
(in
hbond_cluster
)
InfAutofill
(in
schrodinger.application.desmond.util
)
ION_FRAG_DEF
(in
schrodinger.application.ligprep.ionizer
)
iterateNeighboringAtoms()
(in
DistanceCellIterator
)
infile
(in
schrodinger.application.lid.ligand_interaction_diagram_test
)
ION_FRAGLIB_DEF
(in
schrodinger.application.ligprep.ionizer
)
iterateRows()
(in
ResiduesModel
)
Infinity
(in
schrodinger.protein.assignment
)
ionizeCommandParser()
(in
Ionizer
)
iterator()
(in
SwigDoubleVector
)
INFO
(in
schrodinger.utils.log
)
ionizer
(in
schrodinger.application.ligprep
)
iterator()
(in
SwigDoubleVector3
)
info()
(in
schrodinger.maestro.maestro
)
Ionizer
(in
schrodinger.application.ligprep.ionizer
)
iterator()
(in
SwigIntVector
)
info()
(in
Stage
)
ionizeStructure()
(in
Ionizer
)
iterator()
(in
SwigStringVector
)
info()
(in
AppFramework
)
ioredirect
(in
schrodinger.test
)
iterator()
(in
SwigUInt64Vector
)
infra
(in
schrodinger
)
IORedirect
(in
schrodinger.test.ioredirect
)
iterator()
(in
SwigUnsignedIntVector
)
infty
(in
schrodinger.protein.assignment
)
IOSilence
(in
schrodinger.test.ioredirect
)
iterator()
(in
SwigUnsignedIntVector2
)
init()
(in
schrodinger.application.moldescriptors.impl
)
IP_472_OFF
(in
schrodinger.application.jaguar.gui.tabs.optimization_tab
)
iterator()
(in
SwigVectorIntIntPair
)
init_count
(in
BaseJob
)
IP_472_ON
(in
schrodinger.application.jaguar.gui.tabs.optimization_tab
)
iterator()
(in
SwigDoubleVector
)
init_count
(in
LocalhostJob
)
IP_ALL_VALUE_TO_FORMAT
(in
schrodinger.application.jaguar.gui.tabs.output_tab
)
iterator()
(in
SwigDoubleVector3
)
init_ff()
(in
Torsion
)
ip_default
(in
JaguarOptions
)
iterator()
(in
SwigIntVector
)
INIT_GUESS
(in
schrodinger.application.jaguar.gui.task_names
)
IP_OCCUPIED_VALUE_TO_FORMAT
(in
schrodinger.application.jaguar.gui.tabs.output_tab
)
iterator()
(in
SwigStringVector
)
init_report()
(in
FEPReportMaker
)
ir_intensity_precision
(in
NormalMode
)
iterator()
(in
SwigUInt64Vector
)
initActionStates()
(in
ConsensusToolBar
)
irc_bottom_ui
(in
schrodinger.application.jaguar.gui.ui
)
iterator()
(in
SwigUnsignedIntVector
)
initAllAtoms()
(in
ProteinPrep
)
irc_point()
(in
schrodinger.application.jaguar.output
)
iterator()
(in
SwigUnsignedIntVector2
)
initEntry()
(in
DrawDdgPanel
)
irc_step
(in
JaguarOutput
)
iterator()
(in
SwigVectorIntIntPair
)
initEntry()
(in
DrawFepPanel
)
irc_summary()
(in
schrodinger.application.jaguar.output
)
iterInputs()
(in
Stage
)
initEntry()
(in
DrawLrmPanel
)
irc_tab
(in
schrodinger.application.jaguar.gui.tabs
)
iteritems()
(in
PairDict
)
initEntry()
(in
DrawMcPanel
)
irc_top_ui
(in
schrodinger.application.jaguar.gui.ui
)
iterkeys()
(in
PairDict
)
initEntry()
(in
DrawMiniPanel
)
IrcTab
(in
schrodinger.application.jaguar.gui.tabs.irc_tab
)
itervalues()
(in
PairDict
)
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2014-2 Schrodinger Python API
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