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2016-4 Schrodinger Python API
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J
JAG_IN_FILTER
(in
schrodinger.application.jaguar.gui.filedialog
)
JC_outcome_codes
(in
schrodinger.test.stu.constants
)
JobDJRunner
(in
schrodinger.application.glide.packages.driver
)
JAG_IN_SUFFIX
(in
schrodinger.application.jaguar.gui.filedialog
)
jcoupling
(in
schrodinger.trajectory
)
JobErrorHandler
(in
schrodinger.application.desmond.cmj
)
JAG_NAME_STRUCTURE_ROLE
(in
schrodinger.application.jaguar.gui.input_tab_widgets_pka
)
Jcoupling
(in
schrodinger.trajectory.jcoupling
)
JobExpectedFailure
(in
schrodinger.test.stu.outcomes.failures
)
jagInputEdited()
(in
ReadEditMixin
)
Job
(in
schrodinger.application.desmond.cmj
)
JobFailure
(in
schrodinger.test.stu.outcomes.failures
)
jaguar
(in
schrodinger.application
)
job
(in
schrodinger
)
JobFizzledFailure
(in
schrodinger.test.stu.outcomes.failures
)
JAGUAR
(in
schrodinger.infra.mm
)
Job
(in
schrodinger.job.jobcontrol
)
jobhost_is_localhost()
(in
schrodinger.application.glide.packages.startup
)
jaguar
(in
schrodinger.test.stu.outcomes.custom
)
job()
(in
JobAPI
)
jobid()
(in
schrodinger.application.jaguar.textparser
)
jaguar
(in
schrodinger.test.stu.outcomes
)
job_belongs_to_panel()
(in
schrodinger.tasks.jobtasks
)
jobid_re
(in
schrodinger.job.jobcontrol
)
JAGUAR
(in
schrodinger.utils.preferences
)
job_capacity()
(in
schrodinger.application.licensing.licadmin
)
jobid_re
(in
schrodinger.job.launcher
)
jaguar_atoms()
(in
schrodinger.application.qsite.output
)
job_capacity_by_product()
(in
schrodinger.application.licensing.licadmin
)
JOBID_RE
(in
schrodinger.test.stu.common
)
JAGUAR_BABEL1
(in
_mmutil'
)
job_config
(in
AbstractJobTask
)
JOBID_VIEW
(in
schrodinger.job.jobapi
)
JAGUAR_BABEL1
(in
schrodinger.utils.mmutil
)
job_configChanged()
(in
AbstractJobTask
)
jobids()
(in
JobAPI
)
jaguar_diff
(in
schrodinger.application.jaguar
)
JOB_dependent_utils
(in
schrodinger.test.stu.constants
)
JobInput
(in
schrodinger.application.desmond.cmj
)
JAGUAR_IN_MAE_FILETYPES
(in
schrodinger.application.jaguar.gui.utils
)
Job_Details
(in
schrodinger.application.desmond.simulation_block_test
)
JobInputFrame
(in
schrodinger.ui.appframework
)
jaguar_input_keywords()
(in
schrodinger.application.jaguar.jaguar_keyword_utils
)
job_details
(in
schrodinger.application.desmond.simulation_block_test
)
JobInputParams
(in
schrodinger.ui.appframework
)
jaguar_keyword_utils
(in
schrodinger.application.jaguar
)
job_dir
(in
AbstractJobTask
)
JobKilledFailure
(in
schrodinger.test.stu.outcomes.failures
)
jaguar_keywords_xml_filename()
(in
schrodinger.application.jaguar.jaguar_keyword_utils
)
job_dirChanged()
(in
AbstractJobTask
)
JobLaunchFailure
(in
schrodinger.job.jobcontrol
)
JAGUAR_MAIN
(in
_licensing'
)
JOB_DJ_RETRIES
(in
schrodinger.application.matsci.mecp_mod
)
JobLaunchFailure
(in
schrodinger.test.stu.outcomes.failures
)
JAGUAR_MAIN
(in
schrodinger.infra.licensing
)
job_exit_status_get()
(in
schrodinger.maestro.maestro
)
jobname
(in
FEPEdgeData
)
JAGUAR_MAIN
(in
schrodinger.infra.mm
)
job_files()
(in
JobAPI
)
JOBNAME
(in
schrodinger.application.desmond.starter.ui.cmdline
)
JAGUAR_OMPI
(in
_mmutil'
)
JOB_HEADER
(in
schrodinger.application.matsci.textlogger
)
JOBNAME
(in
MSJStringer
)
JAGUAR_OMPI
(in
schrodinger.utils.mmutil
)
job_id_get()
(in
schrodinger.maestro.maestro
)
jobname
(in
QSiteInput
)
JAGUAR_PARALLEL
(in
_licensing'
)
JOB_INCORPORATION_CALLBACK
(in
schrodinger.maestro.maestro
)
jobname
(in
JobConfig
)
JAGUAR_PARALLEL
(in
schrodinger.infra.licensing
)
job_incorporation_function_add()
(in
schrodinger.maestro.maestro
)
JOBNAME
(in
schrodinger.utils.cmdline
)
JAGUAR_PKA
(in
_licensing'
)
job_incorporation_function_remove()
(in
schrodinger.maestro.maestro
)
jobname_suffix_by_calc
(in
schrodinger.application.desmond.fep_gui
)
JAGUAR_PKA
(in
schrodinger.infra.licensing
)
JOB_NAME
(in
ParserWrapper
)
jobname_valid()
(in
schrodinger.ui.appframework
)
JAGUAR_PKA
(in
schrodinger.infra.mm
)
JOB_NOT_STARTED
(in
schrodinger.test.stu.constants
)
jobnameArg()
(in
BaseJaguarPanel
)
JAGUAR_QSITE
(in
_licensing'
)
job_options
(in
AbstractJobTask
)
jobnameChanged()
(in
_SdJobFrame
)
JAGUAR_QSITE
(in
schrodinger.infra.licensing
)
job_options
(in
JobConfig
)
jobnameChanged()
(in
JobConfig
)
JAGUAR_QSITE
(in
schrodinger.infra.mm
)
job_optionsChanged()
(in
AbstractJobTask
)
jobnameData()
(in
AutomaticJobnameMixin
)
JAGUAR_TS_SEARCH
(in
_licensing'
)
job_optionsChanged()
(in
JobConfig
)
JobOptions
(in
schrodinger.tasks.jobtasks
)
JAGUAR_TS_SEARCH
(in
schrodinger.infra.licensing
)
JOB_PRODUCTS_FILE
(in
schrodinger.application.licensing.licadmin
)
jobOptions()
(in
JobTaskRunner
)
JAGUAR_TS_SEARCH
(in
schrodinger.infra.mm
)
job_record()
(in
JobAPI
)
JobOutput
(in
schrodinger.application.desmond.cmj
)
JaguarAtomicResults
(in
schrodinger.application.jaguar.results
)
JOB_REQS_FILE
(in
schrodinger.application.licensing.licadmin
)
jobparam_to_comutil()
(in
schrodinger.ui.macromodel
)
JaguarConfigError
(in
schrodinger.application.jaguar.user_config
)
job_started()
(in
schrodinger.maestro.maestro
)
JobParameters
(in
schrodinger.ui.appframework
)
jaguarDiff()
(in
schrodinger.test.stu.outcomes.jaguar
)
job_status
(in
schrodinger.test.stu.outcomes
)
JobRunner
(in
schrodinger.application.glide.packages.driver
)
JaguarError
(in
schrodinger.application.matsci.mecp_mod
)
job_status_get()
(in
schrodinger.maestro.maestro
)
jobs
(in
schrodinger.application.msv
)
JaguarFailedException
(in
schrodinger.application.matsci.jaguarworkflows
)
job_submitted()
(in
BaseInteractiveEnumeration
)
jobs()
(in
LicenseResource
)
JaguarInput
(in
schrodinger.application.jaguar.input
)
JOB_TYPE_CHOICES
(in
schrodinger.application.jaguar.reactiq_input_constants
)
jobsCount()
(in
RunningJobs
)
JaguarIOError
(in
schrodinger.application.jaguar.exceptions
)
JOB_TYPE_COMPLEX_FORMATION_ONLY
(in
schrodinger.application.jaguar.reactiq_input_constants
)
JobSpecification
(in
schrodinger.job.launchapi
)
JaguarJob
(in
schrodinger.application.matsci.mecp_mod
)
JOB_TYPE_FULL
(in
schrodinger.application.jaguar.reactiq_input_constants
)
JobSpecificationArgsBuilder
(in
schrodinger.job.launchapi
)
JaguarJobs
(in
schrodinger.application.matsci.mecp_mod
)
JOB_TYPE_REACTION_PATH_ONLY
(in
schrodinger.application.jaguar.reactiq_input_constants
)
JobSpecificationBuilder
(in
schrodinger.job.launchapi
)
JaguarKeywordError
(in
schrodinger.application.jaguar.validation
)
JOB_TYPE_TEST_RENUMBERING
(in
schrodinger.application.jaguar.reactiq_input_constants
)
JobSpecificationKeyError
(in
schrodinger.job.launchapi
)
JaguarKeywordException
(in
schrodinger.application.jaguar.validation
)
job_wait()
(in
schrodinger.maestro.maestro
)
JobStatus
(in
schrodinger.application.desmond.cmj
)
JaguarKeywordFormatError
(in
schrodinger.application.jaguar.validation
)
JobAdapter
(in
schrodinger.application.desmond.cmj
)
JobStatusLoop
(in
schrodinger.tasks.jobtasks
)
JaguarKeywordValueError
(in
schrodinger.application.jaguar.validation
)
jobapi
(in
schrodinger.job
)
JobTaskRunner
(in
schrodinger.tasks.runners
)
JaguarKeywordValueTypeError
(in
schrodinger.application.jaguar.validation
)
JobAPI
(in
schrodinger.job.jobapi
)
jobtasks
(in
schrodinger.tasks
)
JaguarOptions
(in
schrodinger.application.jaguar.results
)
JobarrayRunner
(in
schrodinger.application.glide.packages.driver
)
jobUsesTPP()
(in
JobSpecification
)
JaguarOutput
(in
schrodinger.application.jaguar.output
)
JOBBE()
(in
Engine
)
jobUsesTPP()
(in
TaskSpecification
)
JaguarParseError
(in
schrodinger.application.jaguar.textparser
)
JobConfig
(in
schrodinger.tasks.jobtasks
)
jobutils
(in
schrodinger.application.matsci
)
JaguarResults
(in
schrodinger.application.jaguar.results
)
jobcontrol
(in
schrodinger.job
)
Join
(in
schrodinger.application.combiglide.packages.chutils
)
JaguarRuntimeError
(in
schrodinger.application.jaguar.exceptions
)
JobcontrolException
(in
schrodinger.job.jobcontrol
)
join_asls()
(in
schrodinger.application.bioluminate.pml_menus
)
JaguarSettingError
(in
schrodinger.application.jaguar.gui.utils
)
JobControlJob
(in
schrodinger.job.queue
)
join_cont_lines()
(in
schrodinger.application.licensing.licadmin
)
JaguarSettingWarning
(in
schrodinger.application.jaguar.gui.utils
)
JOBCTS
(in
schrodinger.application.macromodel.paraUtils
)
join_structure_files()
(in
schrodinger.application.jaguar.output
)
JaguarTemplates
(in
schrodinger.application.jaguar.make_headers
)
jobdb_index()
(in
JobAPI
)
joinerChanged()
(in
PropFilterDialog
)
JaguarUserFacingException
(in
schrodinger.application.jaguar.exceptions
)
jobdb_index_file()
(in
JobAPI
)
JoiningRules
(in
schrodinger.application.combiglide.packages.chutils
)
jaguarworkflows
(in
schrodinger.application.matsci
)
JobDiedFailure
(in
schrodinger.test.stu.outcomes.failures
)
joins
(in
Join
)
jar
(in
PickleJar
)
jobdirdlg
(in
schrodinger.application.matsci
)
JOULES_PER_CAL
(in
schrodinger.application.desmond.fep_net_charge
)
jbw()
(in
ComUtil
)
JobDJ
(in
schrodinger.job.queue
)
jserver_client
(in
schrodinger.job
)
jbw_sd()
(in
ComUtil
)
JobDJError
(in
schrodinger.test.stu.run
)
JSON_FORMAT
(in
schrodinger.job.jobapi
)
jc_options
(in
schrodinger.application.watermap.watermap_inp
)
JobDJOptions()
(in
Stage
)
Trees
Indices
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2016-4 Schrodinger Python API
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