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2016-4 Schrodinger Python API
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F
F1_KEY
(in
Crystal
)
find_center_of_atoms()
(in
schrodinger.application.bioluminate.pml_menus
)
FOLLOW_EQ_in_output_term483
(in
mexpParser
)
F1F2F3_FORMAT
(in
Crystal
)
find_centroid()
(in
schrodinger.trajectory.hydrophobiccontactfinder
)
FOLLOW_EQ_in_output_term540
(in
mexpParser
)
F1F2F3_KEY
(in
Crystal
)
find_centroid()
(in
ProtLigInteractionFinder
)
FOLLOW_EXP_in_expComp1132
(in
mexpParser
)
F2_KEY
(in
Crystal
)
find_closest_point()
(in
HomologyRama
)
FOLLOW_expComp_in_signedExpComp1121
(in
mexpParser
)
F3_KEY
(in
Crystal
)
find_closest_point()
(in
Rama
)
FOLLOW_expr_in_atom1354
(in
mexpParser
)
fabs
(in
schrodinger.protein.assignment
)
find_closest_rotbond()
(in
schrodinger.application.desmond.r_group_asl
)
FOLLOW_expr_in_bind1033
(in
mexpParser
)
Face
(in
schrodinger.application.matsci.shapes
)
find_component_cts()
(in
schrodinger.application.desmond.fep_net_charge
)
FOLLOW_expr_in_comp1156
(in
mexpParser
)
FACE_TO_FACE
(in
PiPiInteraction
)
find_connected_atom()
(in
Rama
)
FOLLOW_expr_in_exprOrBind1013
(in
mexpParser
)
FACIAL
(in
schrodinger.application.matsci.buildcomplex
)
find_dihedrals()
(in
water_changeable
)
FOLLOW_expr_in_fcnCall1189
(in
mexpParser
)
factor()
(in
mexpParser
)
find_dihedrals()
(in
Jcoupling
)
FOLLOW_expr_in_fcnCall1195
(in
mexpParser
)
FACTOR_ANG_TO_BOHR
(in
schrodinger.application.matsci.espresso.utils
)
find_equivalent_atoms()
(in
schrodinger.application.glide.gui
)
FOLLOW_expr_in_if_1440
(in
mexpParser
)
FACTOR_BOHR_TO_ANG
(in
schrodinger.application.matsci.espresso.utils
)
find_equivalent_st()
(in
schrodinger.application.desmond.system_builder_util
)
FOLLOW_expr_in_if_1446
(in
mexpParser
)
FACTOR_HA_RY
(in
schrodinger.application.matsci.espresso.qeoutput
)
find_forcefield_invalid_structures()
(in
schrodinger.application.matsci.desmondutils
)
FOLLOW_expr_in_if_1452
(in
mexpParser
)
factor_return
(in
mexpParser
)
find_frag_from_closest_rotbond()
(in
schrodinger.application.desmond.r_group_asl
)
FOLLOW_expr_in_iter1482
(in
mexpParser
)
FACTOR_RY_EV
(in
schrodinger.application.matsci.espresso.qeoutput
)
find_fragbox_type()
(in
Packing
)
FOLLOW_expr_in_iter1488
(in
mexpParser
)
factory
(in
schrodinger.application.bioluminate.actions
)
find_fragment_by_cond()
(in
schrodinger.application.desmond.fep_mapping
)
FOLLOW_expr_in_series1413
(in
mexpParser
)
Factory
(in
schrodinger.application.bioluminate.actions.factory
)
find_fragment_MCS()
(in
schrodinger.application.desmond.fep_mapping
)
FOLLOW_exprOrBind_in_block980
(in
mexpParser
)
FAILED
(in
schrodinger.job.queue
)
find_fragments_in_residue()
(in
Packing
)
FOLLOW_exprOrBind_in_block987
(in
mexpParser
)
FAILED
(in
schrodinger.pipeline.pipeline
)
find_generalized_pattern()
(in
schrodinger.protein.sequence
)
FOLLOW_factor_in_expr1057
(in
mexpParser
)
FAILED
(in
Status
)
find_grd_file()
(in
schrodinger.application.glide.packages.driver
)
FOLLOW_factor_in_expr1070
(in
mexpParser
)
failed()
(in
BaseRecognizer
)
find_group_data()
(in
schrodinger.application.matsci.smartsutils
)
FOLLOW_fcnCall_in_atom1267
(in
mexpParser
)
failed_jobs
(in
JobDJ
)
find_hbond_hydrogen()
(in
steric_clash_data_set
)
FOLLOW_header_in_prog158
(in
mexpParser
)
FAILED_RETRYABLE
(in
schrodinger.job.queue
)
find_hets()
(in
schrodinger.protein.findhets
)
FOLLOW_IDENT_in_atom1304
(in
mexpParser
)
FAILED_SPEAR_ELIM_KEY
(in
schrodinger.application.matsci.rxn_channel.rxn_channel
)
find_hunk()
(in
schrodinger.application.glide.packages.testing
)
FOLLOW_IDENT_in_bind1027
(in
mexpParser
)
FAILED_TO_LAUNCH
(in
schrodinger.test.stu.constants
)
find_isolated_water_molecules()
(in
schrodinger.protein._reliability
)
FOLLOW_IDENT_in_fcnCall1182
(in
mexpParser
)
FailedPredicateException
(in
schrodinger.application.desmond.antlr3.exceptions
)
find_isolated_water_molecules()
(in
schrodinger.protein.reliability
)
FOLLOW_IDENT_in_iter1476
(in
mexpParser
)
FAILURE
(in
_licensing'
)
find_key_for_value()
(in
schrodinger.application.jaguar.gui.utils
)
FOLLOW_IDENT_in_varWithType272
(in
mexpParser
)
Failure
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
find_key_pair()
(in
schrodinger.utils.sshconfig
)
FOLLOW_if__in_atom1248
(in
mexpParser
)
FAILURE
(in
schrodinger.infra.licensing
)
find_license_file()
(in
schrodinger.application.licensing.flexlm
)
FOLLOW_iter_in_series1398
(in
mexpParser
)
FAILURE_KEY
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
find_license_resources()
(in
schrodinger.application.licensing.licadmin
)
FOLLOW_iter_in_series1405
(in
mexpParser
)
failure_type
(in
JobDiedFailure
)
find_local_pdb()
(in
schrodinger.protein.getpdb
)
FOLLOW_LIT_in_atom1332
(in
mexpParser
)
failure_type
(in
JobExpectedFailure
)
find_local_repository()
(in
schrodinger.protein.getpdb
)
FOLLOW_LIT_in_meta_term687
(in
mexpParser
)
failure_type
(in
JobFailure
)
find_molecules_closest_to_atoms()
(in
schrodinger.application.matsci.clusterstruct
)
FOLLOW_LIT_in_meta_term751
(in
mexpParser
)
failure_type
(in
JobFizzledFailure
)
find_near_points()
(in
FragBox
)
FOLLOW_LIT_in_meta_term815
(in
mexpParser
)
failure_type
(in
JobKilledFailure
)
find_next_residue()
(in
schrodinger.application.desmond.cms
)
FOLLOW_LIT_in_meta_term869
(in
mexpParser
)
failure_type
(in
JobLaunchFailure
)
find_noncore_fragment()
(in
schrodinger.application.desmond.fep_mapping
)
FOLLOW_LIT_in_output_term499
(in
mexpParser
)
failure_type
(in
LicenseFailure
)
find_noncore_subfragment()
(in
schrodinger.application.desmond.fep_mapping
)
FOLLOW_LIT_in_output_term563
(in
mexpParser
)
failure_type
(in
WorkupFailure
)
find_pattern()
(in
schrodinger.protein.sequence
)
FOLLOW_LIT_in_varWithType276
(in
mexpParser
)
failure_type
(in
WorkupImportFailure
)
FIND_PATTERN_ACTIONS
(in
schrodinger.application.bioluminate.actions.configs
)
FOLLOW_meta_term_in_decl_meta355
(in
mexpParser
)
failure_type
(in
StructureMismatch
)
find_pert_db()
(in
schrodinger.application.mcpro.perturbations
)
FOLLOW_meta_term_in_decl_meta362
(in
mexpParser
)
failures
(in
schrodinger.test.stu.outcomes
)
find_pi_cation_interactions()
(in
schrodinger.structutils.interactions.pi
)
FOLLOW_output_term_in_decl_output302
(in
mexpParser
)
FakeMaestro
(in
schrodinger.application.bioluminate.protein_structure_quality
)
find_pi_pi_interactions()
(in
schrodinger.structutils.interactions.pi
)
FOLLOW_output_term_in_decl_output309
(in
mexpParser
)
FALSE
(in
schrodinger.infra.mm
)
find_polar_contacts()
(in
schrodinger.application.bioluminate.pml_menus
)
FOLLOW_PCLOSE_in_atom1356
(in
mexpParser
)
FALSE
(in
schrodinger.infra.mmproj
)
find_ppw_atom()
(in
schrodinger.application.prepwizard
)
FOLLOW_PCLOSE_in_decl_meta366
(in
mexpParser
)
False_
(in
schrodinger.protein.assignment
)
find_prev_residue()
(in
schrodinger.application.desmond.cms
)
FOLLOW_PCLOSE_in_decl_output313
(in
mexpParser
)
fast3d
(in
schrodinger.infra
)
find_product_package_dir()
(in
schrodinger.application.utils
)
FOLLOW_PCLOSE_in_fcnCall1201
(in
mexpParser
)
FastaAlignmentReader
(in
schrodinger.application.msv.io.seqio
)
find_protonation_state_changes()
(in
ProtAssign
)
FOLLOW_PCLOSE_in_series1409
(in
mexpParser
)
FATAL_ATOM_PROPERTIES
(in
schrodinger.application.matsci.desmondutils
)
find_recap_bonds()
(in
schrodinger.structutils.createfragments
)
FOLLOW_PCLOSE_in_varWithType278
(in
mexpParser
)
fatal_error()
(in
schrodinger.application.jaguar.textparser
)
find_residue_atom()
(in
schrodinger.application.bioluminate.protein
)
FOLLOW_POPEN_in_atom1351
(in
mexpParser
)
FAVORABLE_COLOR
(in
Rama
)
find_rings()
(in
Structure
)
FOLLOW_POPEN_in_decl_meta351
(in
mexpParser
)
fc
(in
_FFIOAngleFBHW
)
find_site_num()
(in
schrodinger.application.phase.hypothesis
)
FOLLOW_POPEN_in_decl_output298
(in
mexpParser
)
fc
(in
_FFIOImproperFBHW
)
find_species()
(in
schrodinger.application.matsci.clusterstruct
)
FOLLOW_POPEN_in_fcnCall1185
(in
mexpParser
)
fc
(in
_FFIOPosFBHW
)
find_stage()
(in
schrodinger.application.desmond.starter.generator.fep_plus
)
FOLLOW_POPEN_in_series1394
(in
mexpParser
)
fc
(in
_FFIOStretchFBHW
)
find_stage_number()
(in
schrodinger.application.desmond.starter.generator.fep_plus
)
FOLLOW_POPEN_in_varWithType274
(in
mexpParser
)
fcc()
(in
HighSymmetryKPath
)
find_substitution_files()
(in
TestScript
)
FOLLOW_SEMI_in_block983
(in
mexpParser
)
FcnCall
(in
schrodinger.application.desmond.enhsamp
)
FIND_TOOLBAR
(in
ViewerWindow
)
FOLLOW_SEMI_in_block991
(in
mexpParser
)
fcnCall()
(in
mexpParser
)
find_trajectory_directory()
(in
CmsStructure
)
FOLLOW_SEMI_in_header193
(in
mexpParser
)
fcnCall_return
(in
mexpParser
)
find_user_password()
(in
ProxyPasswordManager
)
FOLLOW_series_in_atom1229
(in
mexpParser
)
FcnTypes
(in
schrodinger.application.desmond.enhanced_sampling
)
find_virtual_sites()
(in
schrodinger.trajectory.cmsstructure
)
FOLLOW_set_in_expr1061
(in
mexpParser
)
fe_prop
(in
MopacResults71
)
findAromaticBonders()
(in
AssignBondOrders
)
FOLLOW_set_in_factor1086
(in
mexpParser
)
feat
(in
schrodinger.application.phase.constants
)
findAromaticRings()
(in
AssignBondOrders
)
FOLLOW_signedExpComp_in_expComp1135
(in
mexpParser
)
FEATCORRUPT
(in
_licensing'
)
findAttachmentMarkers()
(in
ItemRow
)
FOLLOW_signedExpComp_in_factor1081
(in
mexpParser
)
FEATCORRUPT
(in
schrodinger.infra.licensing
)
findAttachmentMarkers()
(in
TMLigandRowMixin
)
FOLLOW_signedExpComp_in_factor1096
(in
mexpParser
)
FEATEXCLUDE
(in
_licensing'
)
findBond()
(in
Atom
)
FOLLOW_static_in_decl230
(in
mexpParser
)
FEATEXCLUDE
(in
schrodinger.infra.licensing
)
findBond()
(in
System
)
FOLLOW_STRING_in_atom1286
(in
mexpParser
)
FEATNOTINCLUDE
(in
_licensing'
)
findBreakableBonds()
(in
_StructureFragmenter
)
FOLLOW_STRING_in_meta_term614
(in
mexpParser
)
FEATNOTINCLUDE
(in
schrodinger.infra.licensing
)
findColorSchemeByDescription()
(in
ColorSchemeManager
)
FOLLOW_STRING_in_meta_term941
(in
mexpParser
)
FEATQUEUE
(in
_licensing'
)
findColorSchemeByName()
(in
ColorSchemeManager
)
FOLLOW_STRING_in_output_term426
(in
mexpParser
)
FEATQUEUE
(in
schrodinger.infra.licensing
)
findCommonDatanames()
(in
PropFilterDialog
)
FOLLOW_SUBTROP_in_meta_term675
(in
mexpParser
)
Feature
(in
schrodinger.application.glide.glide
)
findContactIds()
(in
System
)
FOLLOW_SUBTROP_in_output_term487
(in
mexpParser
)
Feature
(in
schrodinger.application.licensing.flexlm
)
findCoordinate()
(in
CoordinatesModel
)
FOLLOW_SUBTROP_in_signedExpComp1116
(in
mexpParser
)
feature
(in
event
)
findCore()
(in
AlignCore
)
FOLLOW_varWithType_in_static248
(in
mexpParser
)
FEATURE_A
(in
schrodinger.application.phase.constants
)
findCoreAtomList()
(in
AlignCore
)
FOLLOW_varWithType_in_static255
(in
mexpParser
)
FEATURE_COLORS
(in
schrodinger.application.phase.constants
)
FindDistinctFragments()
(in
schrodinger.application.desmond.packages.msys
)
font_catcher()
(in
schrodinger.ui.widget.default
)
feature_counter
(in
PhaseFeatureMarker
)
findDisulfideBonds()
(in
StructureConverter
)
FONT_NAMES
(in
schrodinger.application.glide.gui
)
FEATURE_D
(in
schrodinger.application.phase.constants
)
findExact()
(in
TermTable
)
FONT_SCALINGS
(in
schrodinger.application.desmond.mplchart
)
FEATURE_DEFINITION_PRESETS
(in
FeatureOptionsCombo
)
findFirstDisorderedMolecule()
(in
Metropolizer
)
fontChange()
(in
DendrogramView
)
FEATURE_DISABLED
(in
_mmutil'
)
findhets
(in
schrodinger.protein
)
fontChange()
(in
MM_QDockWidget
)
FEATURE_DISABLED
(in
schrodinger.utils.mmutil
)
findHydrogenToReplace()
(in
CapTermini
)
fontChange()
(in
MM_QLineEdit
)
feature_editor_ui
(in
schrodinger.application.phase.ui
)
findHydrophobicCenter()
(in
Membrane_Model
)
fontChange()
(in
SHView
)
FEATURE_ENABLED
(in
_mmutil'
)
FindKnots()
(in
schrodinger.application.desmond.packages.msys.knot
)
fontChange()
(in
sketcher
)
FEATURE_ENABLED
(in
schrodinger.utils.mmutil
)
findLargestTranslat()
(in
MultiWalledNanoTube
)
fontChange()
(in
sketcherGUIMultiColumnToolBar
)
FEATURE_EQUIV_PRESETS
(in
FeatureOptionsCombo
)
findLigFrag()
(in
ProtLigInteractionFinder
)
fontChange()
(in
sketcherView
)
feature_flag_default_state()
(in
_mmutil'
)
findLocally()
(in
Code
)
fontColor()
(in
PatchSettings
)
feature_flag_default_state_s()
(in
_mmutil'
)
findManageOutfiles()
(in
DBExportStage
)
FORBIDDEN_TO_MATCH
(in
PhaseFeatureMarker
)
feature_flag_is_enabled()
(in
_mmutil'
)
findMatches()
(in
SmartsPattern
)
force_constant_precision
(in
NormalMode
)
feature_flag_is_enabled_s()
(in
_mmutil'
)
findMinVolume()
(in
DesmondBoxSize
)
force_remove()
(in
schrodinger.utils.fileutils
)
feature_flag_user_state()
(in
_mmutil'
)
findNearest()
(in
SpatialHash
)
force_rename()
(in
schrodinger.utils.fileutils
)
feature_flag_user_state_s()
(in
_mmutil'
)
findNeighboringCells()
(in
HoneycombCell
)
force_rmtree()
(in
schrodinger.utils.fileutils
)
FEATURE_FLAGS_EXEC
(in
schrodinger.utils.maestro11
)
findNonlinearAngle()
(in
ZMatrix
)
FORCE_WIDGETS
(in
schrodinger.infra.pyqt4_compat
)
feature_flags_get_nondefault_map()
(in
_mmutil'
)
findOxygenToReplace()
(in
CapTermini
)
forceConsistentResnum()
(in
Zmat
)
feature_flags_parse_env()
(in
_mmutil'
)
findPattern()
(in
BaseAlignment
)
FORCEFIELD
(in
schrodinger.application.macromodel.input
)
feature_flags_set_user_state()
(in
_mmutil'
)
FindPCSubMenu
(in
schrodinger.application.bioluminate.pml_menus
)
ForcefieldBuilder
feature_flags_set_user_state_s()
(in
_mmutil'
)
findPotentialTripleBondAtoms()
(in
AssignBondOrders
)
forces
(in
JaguarResults
)
FEATURE_H
(in
schrodinger.application.phase.constants
)
findResidue()
(in
Structure
)
forces()
(in
schrodinger.application.jaguar.textparser
)
FEATURE_N
(in
schrodinger.application.phase.constants
)
findRings()
(in
BuilderWithClashDetection
)
forces_precision
(in
JaguarAtomicResults
)
FEATURE_NAMES
(in
schrodinger.application.phase.constants
)
findRings()
(in
ClashChecker
)
forEdgeInRing()
(in
AssignBondOrders
)
FEATURE_NOT_PRESENT
(in
_mmutil'
)
findRings()
(in
AssignBondOrders
)
FORM_TYPE_DISTANCE
(in
schrodinger.application.jaguar.reactiq_input_constants
)
FEATURE_NOT_PRESENT
(in
schrodinger.utils.mmutil
)
findRingSpears()
(in
BuilderWithClashDetection
)
FORM_TYPE_RANDOM
(in
schrodinger.application.jaguar.reactiq_input_constants
)
FEATURE_OFFSET
(in
EditFeatureDialog
)
findRowsMatching()
(in
Project
)
FORM_TYPE_SUPERIMPOSE
(in
schrodinger.application.jaguar.reactiq_input_constants
)
FEATURE_P
(in
schrodinger.application.phase.constants
)
findSpears()
(in
SpearRing
)
formal_charge
(in
Structure
)
FEATURE_Q
(in
schrodinger.application.phase.constants
)
findTextChanged()
(in
FindToolBar
)
formal_charge
(in
_StructureAtom
)
FEATURE_QCOLORS
(in
schrodinger.application.phase.constants
)
FindToolBar
(in
schrodinger.application.bioluminate.ssv.toolbars
)
formASL()
(in
RegionInfo
)
FEATURE_R
(in
schrodinger.application.phase.constants
)
findValgrindSuppressionsFiles()
(in
ExecutableTest
)
format()
(in
Calculator
)
FEATURE_TEXT_COLORS
(in
schrodinger.application.phase.constants
)
findVectorAtoms()
(in
Membrane_Model
)
format()
(in
Contact
)
FEATURE_TYPE
(in
PhaseFeatureMarker
)
findViolations()
(in
PhpExclVol
)
format()
(in
RMSD
)
FEATURE_TYPE_ROLE
(in
schrodinger.application.phase.phase_widgets
)
findWithAll()
(in
TermTable
)
format()
(in
schrodinger.application.jaguar.check_headers
)
FEATURE_TYPES
(in
schrodinger.application.phase.constants
)
findWithAny()
(in
TermTable
)
format()
(in
MyFormatter
)
FEATURE_X
(in
schrodinger.application.phase.constants
)
findWithin()
(in
SpatialHash
)
format_alignment_ids()
(in
schrodinger.application.matsci.nano.particle
)
FEATURE_Y
(in
schrodinger.application.phase.constants
)
findWithOnly()
(in
TermTable
)
format_charge()
(in
schrodinger.application.ligprep.ionizer
)
FEATURE_Z
(in
schrodinger.application.phase.constants
)
findXvolSphereIndex()
(in
PhaseMarkers
)
format_cpu_time()
(in
schrodinger.application.glide.packages.driver
)
FeatureColumns
(in
schrodinger.application.phase.featureselector
)
fingerprint
(in
schrodinger.application.canvas
)
FORMAT_INDEX_TO_VALUE
(in
schrodinger.application.jaguar.gui.tabs.output_tab
)
featureExists()
(in
PhaseMarkers
)
FINGERPRINT_TYPES
(in
CanvasFingerprintGenerator
)
FORMAT_MAESTRO
(in
_structure'
)
FeatureMatchCombo
(in
schrodinger.application.phase.phase_widgets
)
FINGERPRINT_TYPES
(in
schrodinger.pipeline.stages.canvas
)
FORMAT_MAESTRO
(in
schrodinger.infra.structure
)
FeatureModel
(in
schrodinger.application.phase.featureselector
)
FingerprintFromFileGenerator
(in
schrodinger.analysis.enrichment
)
FORMAT_MOL2
(in
_structure'
)
FeatureName
(in
FeatureColumns
)
fingerprintgui
(in
schrodinger.application.canvas
)
FORMAT_MOL2
(in
schrodinger.infra.structure
)
FeatureOptionsCombo
(in
schrodinger.application.phase.phase_widgets
)
finish()
(in
PresetAction
)
FORMAT_NAMES
(in
schrodinger.application.jaguar.gui.tabs.output_tab
)
FeaturePattern
(in
schrodinger.application.glide.glide
)
finish()
(in
Job
)
format_option_strings()
(in
DelegatingIndentedHelpFormatter
)
featureRadii
(in
PhpQSARModel
)
finish()
(in
ProteinCheckLabelSpinner
)
FORMAT_PDB
(in
_structure'
)
FeatureRow
(in
schrodinger.application.phase.featureselector
)
finish()
(in
GlideHTTPHandler
)
FORMAT_PDB
(in
schrodinger.infra.structure
)
featureselector
(in
schrodinger.application.phase
)
finish()
(in
Step
)
FORMAT_PDBX
(in
_structure'
)
FeatureSelector
(in
schrodinger.application.phase.featureselector
)
finish()
(in
StageJob
)
FORMAT_PDBX
(in
schrodinger.infra.structure
)
featureToggled()
(in
FeatureModel
)
finish_request()
(in
GlideHTTPServer
)
format_process_status()
(in
schrodinger.test.stu.process_management
)
feedback_string_set()
(in
schrodinger.maestro.maestro
)
FINISHED
(in
schrodinger.job.queue
)
format_process_tree()
(in
schrodinger.test.stu.process_management
)
fep
(in
schrodinger.application.mcpro
)
finishGuess()
(in
ReorderAtomFrame
)
format_protein_label()
(in
schrodinger.application.desmond.feputils
)
fep()
(in
ComUtil
)
finishPrevStep()
(in
EnergyAndGradients
)
FORMAT_SD
(in
_structure'
)
FEP_COMPLETED_COMPOUND
(in
_licensing'
)
finishProcessingJobControlJob()
(in
Step
)
FORMAT_SD
(in
schrodinger.infra.structure
)
FEP_COMPLETED_COMPOUND
(in
schrodinger.infra.licensing
)
FIRST
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
FORMAT_TO_ALL_VALUE
(in
schrodinger.application.jaguar.gui.tabs.output_tab
)
FEP_COMPLETED_COMPOUND
(in
schrodinger.utils.license
)
FIRST
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
FORMAT_TO_OCCUPIED_VALUE
(in
schrodinger.application.jaguar.gui.tabs.output_tab
)
FEP_CORE_HOPPING
(in
_mmutil'
)
first
(in
SwigIntIntPair
)
format_usage_row()
(in
schrodinger.application.licensing.lmgrd_log_parser
)
FEP_CORE_HOPPING
(in
schrodinger.utils.mmutil
)
first
(in
SwigIntIntPair
)
FORMAT_VALUE_TO_INDEX
(in
schrodinger.application.jaguar.gui.tabs.output_tab
)
FEP_CPU
(in
_licensing'
)
first
(in
SwigIntIntPair
)
formatChanged()
(in
ViewStylePopUp
)
FEP_CPU
(in
schrodinger.infra.licensing
)
first
(in
SwigIntIntPair
)
FormatError
(in
schrodinger.application.desmond.systype
)
FEP_CPU
(in
schrodinger.infra.mm
)
first()
(in
DEE_Backtracking
)
FORMATIONTYPES
(in
schrodinger.application.jaguar.reactiq_input_constants
)
fep_edge_data
(in
schrodinger.application.desmond
)
first()
(in
Bond
)
FormatReader
(in
schrodinger.structure
)
fep_edge_report_maker
(in
schrodinger.application.desmond
)
FIRST_CELL
(in
PBCBonds
)
FORMATS
(in
MyFormatter
)
FEP_GPGPU
(in
_licensing'
)
first_line_re
(in
TextParser
)
formatStatus()
(in
TestQueue
)
FEP_GPGPU
(in
schrodinger.infra.licensing
)
first_property()
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
formattedDetails()
(in
CompositeFailure
)
FEP_GPGPU
(in
schrodinger.infra.mm
)
FIRST_PROPERTY_TERM
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
formCommand()
(in
TestJob
)
FEP_GPGPU
(in
schrodinger.utils.license
)
first_quartile
(in
StatisticalSummary
)
formLine()
(in
BrownieMSJStringer
)
fep_gpgpu_lic()
(in
FepLauncher
)
FIRST_SEP
(in
ChannelDefinition
)
formLine()
(in
MSJStringer
)
fep_gui
(in
schrodinger.application.desmond
)
FIRSTCT
(in
schrodinger.application.macromodel.paraUtils
)
fortfloat()
(in
schrodinger.application.mopac.results2012
)
FEP_LAMBDA_SCHEMES
(in
schrodinger.application.desmond.config
)
FIT_ESP_METHOD
(in
ESPSubTab
)
FP_OPTIONS_DICT_KEY
(in
CanvasKPLS
)
FEP_MAPPER_CHARGE
(in
_mmutil'
)
FIT_SCORE_KEY
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
FP_TEXT_FILE
(in
CanvasKPLS
)
FEP_MAPPER_CHARGE
(in
schrodinger.utils.mmutil
)
fitToScreenSlot()
(in
sketcher
)
FPE_DIVIDEBYZERO
(in
schrodinger.protein.assignment
)
FEP_MAPPER_POSITION_AND_BONDING
(in
_mmutil'
)
fix_all_threads()
(in
schrodinger.application.desmond.packages.msys.knot
)
FPE_INVALID
(in
schrodinger.protein.assignment
)
FEP_MAPPER_POSITION_AND_BONDING
(in
schrodinger.utils.mmutil
)
fix_cmd()
(in
schrodinger.job.jobcontrol
)
FPE_OVERFLOW
(in
schrodinger.protein.assignment
)
fep_mapping
(in
schrodinger.application.desmond
)
fix_cmd()
(in
schrodinger.utils.licutils
)
FPE_UNDERFLOW
(in
schrodinger.protein.assignment
)
FEP_MAPPING_BRIDGE
(in
schrodinger.application.desmond.fep_mapping
)
fix_common_structure_mistakes()
(in
schrodinger.application.prepwizard
)
FPTypeCB()
(in
CanvasFingerprintGeneratorGUI
)
FEP_MAPPING_ORIGINAL_INDEX
(in
schrodinger.application.desmond.fep_mapping
)
fix_elements()
(in
ProtAssign
)
FRACT_KEYS
(in
schrodinger.application.matsci.nano.interface_mod
)
fep_net_charge
(in
schrodinger.application.desmond
)
fix_filenames()
(in
Cms
)
FRACT_KEYS
(in
Crystal
)
FEP_OPLS
(in
_licensing'
)
fix_for_prime()
(in
schrodinger.application.prime.primefix
)
FRACT_OFFSET
(in
schrodinger.application.matsci.nano.xtal
)
FEP_OPLS
(in
schrodinger.infra.licensing
)
fix_formal_charge()
(in
schrodinger.application.prime.primefix
)
frag_handle
(in
SubstCoreDatabase
)
FEP_OPLS
(in
schrodinger.infra.mm
)
fix_metal_bond_orders()
(in
schrodinger.application.matsci.buildcomplex
)
FragBox
(in
Packing
)
FEP_PER_COMPOUND_LICENSE
(in
_mmutil'
)
fix_metal_bonding()
(in
schrodinger.application.matsci.nano.xtal
)
FragClass
(in
schrodinger.application.desmond.fep_gui
)
FEP_PER_COMPOUND_LICENSE
(in
schrodinger.utils.mmutil
)
fix_N4s()
(in
AssignBondOrders
)
FRAGFILE_STR
(in
schrodinger.application.combiglide.combenumdock
)
fep_plus
(in
schrodinger.application.desmond.starter.generator
)
fix_sulfur_charges()
(in
schrodinger.application.prepwizard
)
fragImportFromSketcher()
(in
BaseInteractiveEnumeration
)
fep_plus
(in
schrodinger.application.desmond.starter.ui
)
fix_thread()
(in
schrodinger.application.desmond.packages.msys.knot
)
FRAGMARK
(in
Icons
)
FEP_PLUS_BETA
(in
_mmutil'
)
fixAll()
(in
FixForPrime
)
Fragment
(in
schrodinger.application.ligprep.ionizer
)
FEP_PLUS_BETA
(in
schrodinger.utils.mmutil
)
fixDNACaps()
(in
FixForPrime
)
FRAGMENT
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
fep_reporter
(in
schrodinger.application.desmond
)
FIXED
(in
schrodinger.application.glide.glide
)
Fragment
(in
Packing
)
fep_schedule()
(in
schrodinger.application.desmond.mdkey
)
FIXED_WIDTH_FONT
(in
schrodinger.ui.appframework
)
FRAGMENT_INCREMENT_TAG
(in
schrodinger.application.combiglide.combenumdock
)
fep_scholar_msj_generator
(in
schrodinger.application.desmond
)
FIXED_WIDTH_FONT
(in
schrodinger.ui.widget.default
)
FRAGMENT_LIBS
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
fep_scholar_rules
(in
schrodinger.application.desmond
)
FIXED_WIDTH_FONT
(in
schrodinger.ui.widget.tkinterwidget
)
FRAGMENT_LIBS_DEFAULT
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
fep_scholar_util
(in
schrodinger.application.desmond
)
fixedColumnDataChanged()
(in
SequenceAlignmentModel
)
FRAGMENT_MUTATOR
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
fep_struc
(in
schrodinger.application.desmond
)
fixFormalCharge()
(in
AssignBondOrders
)
fragment_mutator()
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
FEP_TOTAL_FREE_ENERGY
(in
_mmutil'
)
FixForPrime
(in
schrodinger.application.prime.primefix
)
FRAGMENT_NAME
(in
Constants
)
FEP_TOTAL_FREE_ENERGY
(in
schrodinger.utils.mmutil
)
fixHets()
(in
FixForPrime
)
FRAGMENT_NAME
(in
schrodinger.application.matsci.nano.particle
)
fep_util
(in
schrodinger.application.desmond
)
fixHydrogens()
(in
ElementAlchemist
)
fragment_size_cond()
(in
schrodinger.application.desmond.fep_mapping
)
fepana
(in
schrodinger.application.desmond
)
fixKetones()
(in
AssignBondOrders
)
FRAGMENT_SIZE_THRESHOLD
(in
schrodinger.application.desmond.fep_mapping
)
FepanaJob
fixMetals()
(in
FixForPrime
)
FragmentCreator
(in
schrodinger.structutils.createfragments
)
FepAnalysis
fixPdbresAndPdbnames()
(in
FixForPrime
)
fragmentStructure()
(in
FragmentCreator
)
FEPConfigDialog
(in
schrodinger.application.desmond.fep_gui
)
fixRibbons()
(in
ColorRibbonMixin
)
fragmentStructureForEA()
(in
FragmentCreator
)
fepdiff
(in
schrodinger.application.desmond
)
fixSolute()
(in
SystemBuilderInput
)
frame
(in
schrodinger.application.bioluminate.sliderchart
)
FEPEdgeData
(in
schrodinger.application.desmond.fep_edge_data
)
fixSpecialResidues()
(in
FixForPrime
)
Frame
(in
schrodinger.application.desmond.packages.traj
)
FEPEdgeReportMaker
(in
schrodinger.application.desmond.fep_edge_report_maker
)
FIXUP
(in
schrodinger.application.desmond.fep_edge_report_maker
)
Frame
(in
schrodinger.ui.widget.tkinterwidget
)
fepio()
(in
FFIOStructure
)
FIXUP
(in
schrodinger.application.desmond.fep_scholar_util
)
frame()
(in
Reader
)
FEPIO_BLOCK_LIST
(in
schrodinger.application.desmond.fepdiff
)
FIZZLED
(in
JobStatus
)
frame()
(in
Reader
)
FEPIO_FFIO_MAP
(in
schrodinger.application.desmond.fepdiff
)
FL_EMISSION
(in
schrodinger.application.matsci.optoelectronics
)
frame_iter
(in
DesmondSimulation
)
fepio_sub_block_prop_links
(in
schrodinger.application.desmond.ffiostructure
)
FLAG_KEYWORDS
(in
schrodinger.application.matsci.jobutils
)
frame_time()
(in
_FepTrajectory
)
FEPIOAtommapBlockProperty
(in
schrodinger.application.desmond.fepdiff
)
FLAG_RESTART_DISP
(in
schrodinger.application.matsci.jobutils
)
FrameAslSelection
FEPIOBlockProperty
(in
schrodinger.application.desmond.fepdiff
)
FLAG_RESTART_HOST
(in
schrodinger.application.matsci.jobutils
)
FrameIndexSelection
FEPIOProperty
(in
schrodinger.application.desmond.fepdiff
)
FLAG_RESTART_JOBNAME
(in
schrodinger.application.matsci.jobutils
)
FrameIter
(in
schrodinger.application.desmond.packages.msys.molfile
)
FepJob
FLAG_RESTART_PROJ
(in
schrodinger.application.matsci.jobutils
)
FrameLoader
(in
schrodinger.trajectory.rmsd2d
)
FepLauncher
FLAG_RESTART_VIEWNAME
(in
schrodinger.application.matsci.jobutils
)
frames()
(in
Reader
)
FepMapper
FLAG_USEZIPDATA
(in
schrodinger.application.matsci.jobutils
)
frames()
(in
Reader
)
FepMapperCleanup
flags()
(in
FrameworkModel
)
framesettools
(in
schrodinger.application.desmond
)
FepMapperReport
flags()
(in
CriteriaListModel
)
FrameSliceSelection
FepMapping
flags()
(in
ResiduesModel
)
FRAMEWORK_ROLE
(in
schrodinger.application.bioluminate.antibody.search_results_table
)
FEPReport
(in
schrodinger.application.desmond.replica_sid_generator
)
flags()
(in
StrucListModel
)
FrameworkModel
(in
schrodinger.application.bioluminate.antibody.search_results_table
)
FEPReportMaker
(in
schrodinger.application.desmond.fep_reporter
)
flags()
(in
AtomGroupModel
)
FrameworkTemplate
(in
schrodinger.application.bioluminate.antibody.utils
)
FepSchedule
(in
schrodinger.application.desmond.mdkey
)
flags()
(in
PosResModel
)
FrameworkTemplate
(in
schrodinger.application.bioluminate.antibody_utils
)
FEPScholarMapper
(in
schrodinger.application.desmond.fep_scholar_util
)
flags()
(in
TableModel
)
FREE
(in
schrodinger.application.glide.glide
)
FEPScholarMsjGenerator
(in
schrodinger.application.desmond.fep_scholar_msj_generator
)
flags()
(in
InputEntriesModel
)
free()
(in
Queue
)
FepSimulation
(in
schrodinger.trajectory.desmondsimulation
)
flags()
(in
ConstraintCoordinatesModel
)
free_energy_costs()
(in
schrodinger.application.ligprep.ionizer
)
FEPSimulationReport
(in
schrodinger.application.desmond.replica_sid_generator
)
flags()
(in
SubTabModel
)
FREE_ENERGY_HEADER
(in
schrodinger.application.bioluminate.propka_parse
)
fepSolvDep()
(in
DrawFepPanel
)
flags()
(in
AlignmentInclusionProxyModel
)
freeAll()
(in
ZAtom
)
FEPStructureObject
(in
schrodinger.application.desmond.fep_scholar_util
)
flags()
(in
AnnotationProxyModel
)
freeAtom()
(in
ZMatrix
)
FEPTorsions
(in
schrodinger.application.desmond.fep_edge_data
)
flags()
(in
CriteriaListModel
)
freeAtomAngle()
(in
ZMatrix
)
FEPTorsionsContainer
(in
schrodinger.application.desmond.fep_edge_data
)
flags()
(in
PatternModel
)
freeAtomBond()
(in
ZMatrix
)
feputils
(in
schrodinger.application.desmond
)
flashRow()
(in
BaseInteractiveEnumeration
)
freeAtomDihedral()
(in
ZMatrix
)
FepVrun
flatten()
(in
HydrophobicContactFinder
)
freeCachedEntries()
(in
Project
)
fetchEntrezSequence()
(in
GetSequencesDialog
)
flatten_list()
(in
schrodinger.application.bioluminate.surfcomp
)
freeCoord()
(in
ZAtom
)
fetchFastaFromUrl()
(in
GetSequencesDialog
)
flex_display_update()
(in
ModelSystemPanel
)
FreeEnergyContrib
(in
schrodinger.application.desmond.fepana
)
fetchPPDB()
(in
StructureType
)
flexlm
(in
schrodinger.application.licensing
)
freeze_atom()
(in
schrodinger.application.desmond.remd
)
fetchSequences()
(in
GetSequencesDialog
)
FLEXLOCK2CKOUT
(in
_licensing'
)
freeze_atoms()
(in
schrodinger.application.desmond.predict_remd_temp
)
fetchUniprotSequence()
(in
GetSequencesDialog
)
FLEXLOCK2CKOUT
(in
schrodinger.infra.licensing
)
freeze_existing_hydrogens()
(in
ProtAssign
)
FF_CUTOFF_PROPERTY
(in
schrodinger.application.matsci.coarsegrain
)
flip_box_for_fortran()
(in
schrodinger.trajectory.rdf
)
FREEZER_CHOICES
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
ffangle
(in
FFStructure
)
flip_xyz_for_fortran()
(in
schrodinger.trajectory.rdf
)
FREEZERS_DEFAULT
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
FFB_CMD1
(in
ForcefieldBuilder
)
float
frequencies()
(in
schrodinger.application.jaguar.textparser
)
FFB_CMD2
(in
ForcefieldBuilder
)
FLOAT
(in
schrodinger.utils.preferences
)
frequencies_old()
(in
schrodinger.application.jaguar.textparser
)
ffbond
(in
FFStructure
)
FLOAT_TRUNCATION
(in
schrodinger.application.canvas.topo_descriptors
)
frequency_precision
(in
NormalMode
)
ffconstraint
(in
FFStructure
)
FLOATABLE
(in
SequenceDockWidget
)
freshenParentAndChildIndexes()
(in
BaseTree
)
ffdihedral
(in
FFStructure
)
floatChange()
(in
SequenceDockWidget
)
freshenParentAndChildIndexes()
(in
Tree
)
ffexclusion
(in
FFStructure
)
floating_number_pattern
(in
EnergyGroupAnalysis
)
frexp
(in
schrodinger.protein.assignment
)
ffio()
(in
FFIOStructure
)
FLOATING_POINT_SUPPORT
(in
schrodinger.protein.assignment
)
from_command_only()
(in
schrodinger.application.msv.command
)
FFIO_BLOCK_LIST
(in
schrodinger.application.desmond.fepdiff
)
FLOATOK_ONEHOSTID
(in
_licensing'
)
FROM_FREEZER_KEY
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
ffio_block_names
(in
schrodinger.application.desmond.ffiostructure
)
FLOATOK_ONEHOSTID
(in
schrodinger.infra.licensing
)
from_initial_population()
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
ffio_mol_total
(in
FFStructure
)
FloatParam
(in
schrodinger.tasks.parameters
)
from_list()
(in
Bitset
)
ffio_refresh()
(in
Cms
)
floor
(in
schrodinger.protein.assignment
)
from_maestro()
(in
schrodinger.protein.getpdb_utility
)
ffio_sub_block_prop_links
(in
schrodinger.application.desmond.ffiostructure
)
floor_divide
(in
schrodinger.protein.assignment
)
from_style
(in
_StructureBond
)
FFIOBlockProperty
(in
schrodinger.application.desmond.fepdiff
)
floor_mod()
(in
schrodinger.application.matsci.nano.surfaces_interfaces_mod
)
fromArgv()
(in
schrodinger.infra.ark
)
FFIOProperty
(in
schrodinger.application.desmond.fepdiff
)
Flow
fromDict()
(in
AbstractCompoundParam
)
ffiostructure
(in
schrodinger.application.desmond
)
FLUORINE_ACCEPTOR
(in
_structure'
)
fromEtotString()
(in
ScfIteration
)
FFIOStructure
(in
schrodinger.application.desmond.ffiostructure
)
FLUORINE_ACCEPTOR
(in
schrodinger.infra.structure
)
fromJSON()
(in
JobSpecification
)
ffld()
(in
schrodinger.application.qsite.output
)
FLUORINE_DONOR
(in
_structure'
)
fromJSON()
(in
TaskSpecification
)
FFLD14
(in
schrodinger.application.watermap.watermap_inp
)
FLUORINE_DONOR
(in
schrodinger.infra.structure
)
fromJSON()
(in
_RuntimeParameters
)
FFLD16
(in
schrodinger.application.watermap.watermap_inp
)
flush()
(in
ostream
)
fromJson()
(in
AbstractCompoundParam
)
FFLD_ACADEMIC
(in
_licensing'
)
flush()
(in
ostream
)
fromkeys()
(in
PairDict
)
FFLD_ACADEMIC
(in
schrodinger.infra.licensing
)
flush()
(in
ostream
)
fromSmartsError()
(in
RGroupException
)
FFLD_ACADEMIC
(in
schrodinger.infra.mm
)
flush()
(in
ostream
)
FromSmilesString()
(in
schrodinger.application.desmond.packages.msys
)
FFLD_DEVELOPMENT
(in
_licensing'
)
fm
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.logger_shell
)
fromString()
(in
GenOptions
)
FFLD_DEVELOPMENT
(in
schrodinger.infra.licensing
)
fmax
(in
schrodinger.protein.assignment
)
fromString()
(in
schrodinger.infra.ark
)
ffld_exec_dir
(in
schrodinger.trajectory.analyze_trajectories
)
fmin
(in
schrodinger.protein.assignment
)
fromString()
(in
StructureReader
)
ffld_inst_dir
(in
schrodinger.trajectory.analyze_trajectories
)
fmod
(in
schrodinger.protein.assignment
)
fromString()
(in
sketcherChemicalKnowledge
)
ffld_name
(in
schrodinger.structutils.minimize
)
fmt
(in
schrodinger.application.licensing.flexlm
)
fromText()
(in
Basis
)
FFLD_OPLS
(in
_licensing'
)
fmt
(in
schrodinger.application.licensing.licadmin
)
front()
(in
stringvector
)
FFLD_OPLS
(in
schrodinger.infra.licensing
)
fn_prop
(in
MopacResults71
)
front()
(in
SwigDoubleVector
)
FFLD_OPLS
(in
schrodinger.infra.mm
)
fname
(in
schrodinger.application.desmond.ffiostructure
)
front()
(in
SwigDoubleVector3
)
FFLD_OPLS2007
(in
_licensing'
)
FNUM_REGEX
(in
schrodinger.application.mopac.results2012
)
front()
(in
SwigIntVector
)
FFLD_OPLS2007
(in
schrodinger.infra.licensing
)
focusFinder()
(in
SimplifiedSequenceViewer
)
front()
(in
SwigStringVector
)
FFLD_OPLS2007_PRINT
(in
_licensing'
)
focusInEvent()
(in
DendrogramGraphicNode
)
front()
(in
SwigUInt64Vector
)
FFLD_OPLS2007_PRINT
(in
schrodinger.infra.licensing
)
focusInEvent()
(in
DendrogramGraphicNodeLabel
)
front()
(in
SwigUnsignedIntVector
)
FFLD_OPLS2008
(in
_licensing'
)
focusInEvent()
(in
DendrogramGraphicTree
)
front()
(in
SwigUnsignedIntVector2
)
FFLD_OPLS2008
(in
schrodinger.infra.licensing
)
focusInEvent()
(in
DendrogramScene
)
front()
(in
SwigVectorIntIntPair
)
FFLD_OPLS2008_PRINT
(in
_licensing'
)
focusInEvent()
(in
DendrogramView
)
front()
(in
SwigDoubleVector
)
FFLD_OPLS2008_PRINT
(in
schrodinger.infra.licensing
)
focusInEvent()
(in
MM_QDockWidget
)
front()
(in
SwigDoubleVector3
)
FFLD_OPLS2011
(in
_licensing'
)
focusInEvent()
(in
MM_QLineEdit
)
front()
(in
SwigIntVector
)
FFLD_OPLS2011
(in
schrodinger.infra.licensing
)
focusInEvent()
(in
SHView
)
front()
(in
SwigStringVector
)
FFLD_OPLS2011
(in
schrodinger.infra.mm
)
focusInEvent()
(in
sketcher
)
front()
(in
SwigUInt64Vector
)
FFLD_OPLS2011_PRINT
(in
_licensing'
)
focusInEvent()
(in
sketcherAtom
)
front()
(in
SwigUnsignedIntVector
)
FFLD_OPLS2011_PRINT
(in
schrodinger.infra.licensing
)
focusInEvent()
(in
sketcherBond
)
front()
(in
SwigUnsignedIntVector2
)
FFLD_OPLS2011_PRINT
(in
schrodinger.infra.mm
)
focusInEvent()
(in
sketcherGUIMultiColumnToolBar
)
front()
(in
SwigVectorIntIntPair
)
FFLD_OPLS_MAIN
(in
_licensing'
)
focusInEvent()
(in
sketcherGraphicalObject
)
front()
(in
SwigDoubleVector
)
FFLD_OPLS_MAIN
(in
schrodinger.infra.licensing
)
focusInEvent()
(in
sketcherResidue
)
front()
(in
SwigDoubleVector3
)
FFLD_OPLS_MAIN
(in
schrodinger.infra.mm
)
focusInEvent()
(in
sketcherResidueInteraction
)
front()
(in
SwigIntVector
)
FFLD_OPLS_PRINT
(in
_licensing'
)
focusInEvent()
(in
sketcherScene
)
front()
(in
SwigStringVector
)
FFLD_OPLS_PRINT
(in
schrodinger.infra.licensing
)
focusInEvent()
(in
sketcherView
)
front()
(in
SwigUInt64Vector
)
FFLD_OPLS_PRINT
(in
schrodinger.infra.mm
)
focusNextChild()
(in
DendrogramView
)
front()
(in
SwigUnsignedIntVector
)
ffld_python_dir
(in
schrodinger.trajectory.analyze_trajectories
)
focusNextChild()
(in
MM_QDockWidget
)
front()
(in
SwigUnsignedIntVector2
)
FFLD_SERVER
(in
_licensing'
)
focusNextChild()
(in
MM_QLineEdit
)
front()
(in
SwigVectorIntIntPair
)
FFLD_SERVER
(in
schrodinger.infra.licensing
)
focusNextChild()
(in
SHView
)
front()
(in
SwigDoubleVector
)
ffldVersion()
(in
Volumizer
)
focusNextChild()
(in
sketcher
)
front()
(in
SwigIntVector
)
ffpair
(in
FFStructure
)
focusNextChild()
(in
sketcherGUIMultiColumnToolBar
)
front()
(in
SwigSizetVector
)
ffpseudo
(in
FFStructure
)
focusNextChild()
(in
sketcherView
)
front()
(in
SwigStringVector
)
ffrestraint
(in
FFStructure
)
focusNextPrevChild()
(in
DendrogramScene
)
front()
(in
SwigVectorDoubleVector
)
ffsite
(in
FFStructure
)
focusNextPrevChild()
(in
DendrogramView
)
front()
(in
SwigVectorIntVector
)
ffstructure
(in
schrodinger.trajectory
)
focusNextPrevChild()
(in
MM_QDockWidget
)
front()
(in
SwigVectorSizetVector
)
FFStructure
(in
schrodinger.trajectory.ffstructure
)
focusNextPrevChild()
(in
MM_QLineEdit
)
front()
(in
SwigVectorStringVector
)
ffvdwtype
(in
FFStructure
)
focusNextPrevChild()
(in
SHView
)
front()
(in
DoubleDoubleList
)
ffvirtual
(in
FFStructure
)
focusNextPrevChild()
(in
sketcher
)
front()
(in
DoubleList
)
field_sortkey
(in
schrodinger.job.jobcontrol
)
focusNextPrevChild()
(in
sketcherGUIMultiColumnToolBar
)
front()
(in
StringList
)
FIELD_WIDTH
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
focusNextPrevChild()
(in
sketcherScene
)
front()
(in
SwigAtomList
)
FieldGrowthPolicy
focusNextPrevChild()
(in
sketcherView
)
front()
(in
SwigAtomPairList
)
FILE
(in
JobInputFrame
)
focusOutEvent()
(in
DendrogramGraphicNode
)
front()
(in
SwigAtomPairWithValueList
)
FILE
(in
MultiInputFrame
)
focusOutEvent()
(in
DendrogramGraphicNodeLabel
)
front()
(in
SwigAtomQueryParamsList
)
FILE_BASE_NAME
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
focusOutEvent()
(in
DendrogramGraphicTree
)
front()
(in
SwigDcNonPbcAtomIdxList
)
FILE_CORRUPT
(in
JobStatus
)
focusOutEvent()
(in
DendrogramScene
)
front()
(in
SwigDcPbcAtomList
)
file_dirname()
(in
schrodinger.application.licensing.licadmin
)
focusOutEvent()
(in
DendrogramView
)
front()
(in
SwigPiCationList
)
FILE_IMPORT_TXT
(in
ParticipantView
)
focusOutEvent()
(in
MM_QDockWidget
)
front()
(in
SwigPiPiInteractionList
)
FILE_NAMES
(in
schrodinger.application.jaguar.gui.tabs.output_tab
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focusOutEvent()
(in
MM_QLineEdit
)
front()
(in
SwigRingList
)
FILE_NOT_FOUND
(in
JobStatus
)
focusOutEvent()
(in
SHView
)
front()
(in
SwigSaltBridgeList
)
FILE_PICK_WARNING
(in
MoleculeTabPka
)
focusOutEvent()
(in
sketcher
)
front()
(in
SwigDoubleVector
)
file_types
(in
Controller
)
focusOutEvent()
(in
sketcherAtom
)
front()
(in
SwigDoubleVector3
)
file_warning_template
(in
schrodinger.utils.installation_check
)
focusOutEvent()
(in
sketcherBond
)
front()
(in
SwigIntVector
)
filedialog
(in
schrodinger.application.jaguar.gui
)
focusOutEvent()
(in
sketcherGUIMultiColumnToolBar
)
front()
(in
SwigStringVector
)
FileDialogWithExtraCombo
(in
schrodinger.application.jaguar.gui.filedialog
)
focusOutEvent()
(in
sketcherGraphicalObject
)
front()
(in
SwigUInt64Vector
)
FileEntry
(in
schrodinger.application.desmond.cwidget
)
focusOutEvent()
(in
sketcherResidue
)
front()
(in
SwigUnsignedIntVector
)
fileEntryModified()
(in
_McproProt
)
focusOutEvent()
(in
sketcherResidueInteraction
)
front()
(in
SwigUnsignedIntVector2
)
fileEntryModified()
(in
_ProtItem
)
focusOutEvent()
(in
sketcherScene
)
front()
(in
SwigVectorIntIntPair
)
filelog
(in
schrodinger.application.licensing.flexlm
)
focusOutEvent()
(in
sketcherView
)
front_transparency
(in
Surface
)
FileMode
FocusPolicy
FROZEN_ATOM_MASS_THRESHOLD
(in
schrodinger.application.desmond.predict_remd_temp
)
filename
(in
SubjobState
)
focusPreviousChild()
(in
DendrogramView
)
FROZEN_ATOM_MASS_THRESHOLD
(in
schrodinger.application.desmond.remd
)
filename()
(in
_EneFile
)
focusPreviousChild()
(in
MM_QDockWidget
)
FROZEN_ATOMS_PROPERTY_NAME
(in
Engine
)
filename_extensions
(in
SeqFile
)
focusPreviousChild()
(in
MM_QLineEdit
)
FROZEN_NAME
(in
_AtomGroup
)
filename_extensions
(in
StkFile
)
focusPreviousChild()
(in
SHView
)
FrozenStep
(in
schrodinger.application.matsci.jaguarworkflows
)
FILES
(in
SimplifiedSequenceViewer
)
focusPreviousChild()
(in
sketcher
)
fs_decode()
(in
schrodinger.utils.unicodesupport
)
files_dont_exist()
(in
schrodinger.test.stu.outcomes.standard_workups
)
focusPreviousChild()
(in
sketcherGUIMultiColumnToolBar
)
fs_encode()
(in
schrodinger.utils.unicodesupport
)
files_exist()
(in
schrodinger.test.stu.outcomes.standard_workups
)
focusPreviousChild()
(in
sketcherView
)
fsenc
(in
schrodinger.utils.fileutils
)
filesToArchive()
(in
DockingSubjob
)
FocusReason
fsenc
(in
schrodinger.utils.unicodesupport
)
filesToDelete()
(in
DockingSubjob
)
fod_precision
(in
Calculator
)
FTYPE_INPUT
(in
schrodinger.job.jobapi
)
filesToDelete()
(in
SplitDockingSubjob
)
FOG
(in
schrodinger.application.bioluminate.actions.icons
)
FTYPE_OTHER
(in
schrodinger.job.jobapi
)
fileutils
(in
schrodinger.utils
)
FOLLOW_45_in_static244
(in
mexpParser
)
FTYPE_OUTPUT
(in
schrodinger.job.jobapi
)
FILL
(in
schrodinger.graphics3d.common
)
FOLLOW_46_in_decl_output296
(in
mexpParser
)
fukui_indices()
(in
schrodinger.application.jaguar.textparser
)
fill()
(in
StructureListWidget
)
FOLLOW_47_in_decl_meta349
(in
mexpParser
)
FUKUI_ROW
(in
schrodinger.application.jaguar.gui.tabs.properties_tab
)
fill()
(in
Bitset
)
FOLLOW_48_in_meta_term592
(in
mexpParser
)
FukuiIndices
(in
schrodinger.application.jaguar.results
)
fill_missing_loops()
(in
schrodinger.application.prepwizard
)
FOLLOW_48_in_output_term404
(in
mexpParser
)
FULL_FILL
(in
Partition
)
fill_missing_side_chains()
(in
schrodinger.application.prepwizard
)
FOLLOW_49_in_meta_term664
(in
mexpParser
)
FULL_HERMANN_MAUGUIN_SYMBOL
(in
SpaceGroup
)
fillBuffer()
(in
CommonTokenStream
)
FOLLOW_49_in_output_term476
(in
mexpParser
)
full_lic
(in
schrodinger.application.canvas.utils
)
fillBuffer()
(in
CommonTreeNodeStream
)
FOLLOW_50_in_meta_term681
(in
mexpParser
)
FULL_NAME_TAG
(in
SpaceGroup
)
FillRule
FOLLOW_50_in_meta_term745
(in
mexpParser
)
full_or_main_lic
(in
schrodinger.application.canvas.utils
)
fillStatusLabel()
(in
ItemRow
)
FOLLOW_50_in_meta_term809
(in
mexpParser
)
FULL_VIEW
(in
schrodinger.job.jobapi
)
filter()
(in
ComUtil
)
FOLLOW_50_in_output_term493
(in
mexpParser
)
fullapi
(in
_BaseClient
)
filter()
(in
schrodinger.utils.sea
)
FOLLOW_50_in_output_term557
(in
mexpParser
)
fullCmdList()
(in
AbstractJobTask
)
filter_data()
(in
CalcBAR
)
FOLLOW_51_in_meta_term724
(in
mexpParser
)
FullColumns
(in
schrodinger.application.bioluminate.antibody.search_results_table
)
filter_data_by_chain()
(in
ModelCheck
)
FOLLOW_51_in_output_term536
(in
mexpParser
)
fullCommand()
(in
_PickToggle
)
filter_undesired_states()
(in
schrodinger.application.prepwizard
)
FOLLOW_52_in_meta_term786
(in
mexpParser
)
fullCommand()
(in
PickToggle
)
filterAcceptsColumn()
(in
ConstraintCoordinatesProxyModel
)
FOLLOW_53_in_meta_term852
(in
mexpParser
)
FullIORedirect
(in
schrodinger.test.ioredirect
)
filterAcceptsColumn()
(in
ScanCoordinatesProxyModel
)
FOLLOW_54_in_meta_term922
(in
mexpParser
)
fullname
(in
ResData
)
filterAcceptsColumn()
(in
AlignmentMetricsFilterProxy
)
FOLLOW_55_in_series1392
(in
mexpParser
)
fullname
(in
Sequence
)
filterAcceptsColumn()
(in
AnnotationFilterProxyModel
)
FOLLOW_56_in_if_1436
(in
mexpParser
)
fullname
(in
Project
)
filterAcceptsRow()
(in
SubTabProxyModel
)
FOLLOW_57_in_if_1442
(in
mexpParser
)
fullName()
(in
ResData
)
filterAcceptsRow()
(in
AnnotationFilterProxyModel
)
FOLLOW_58_in_if_1448
(in
mexpParser
)
fullname()
(in
Atom
)
filterEntryIndicesByName()
(in
MM_Project
)
FOLLOW_ADDOP_in_signedExpComp1111
(in
mexpParser
)
FullProxyModel
(in
schrodinger.application.bioluminate.antibody.search_results_table
)
filterFile()
(in
SubSetStage
)
FOLLOW_atom_in_comp1149
(in
mexpParser
)
FullTable
(in
schrodinger.application.bioluminate.antibody.search_results_table
)
FILTERFILE_EXT
(in
schrodinger.utils.ligfilter
)
FOLLOW_BCLOSE_in_comp1158
(in
mexpParser
)
FULLY_ANALYTIC_ACCURACY
(in
ScfTab
)
filtering
(in
schrodinger.application.vsw.stages
)
FOLLOW_bind_in_exprOrBind1017
(in
mexpParser
)
fully_conserved
(in
Consensus
)
filtering
(in
schrodinger.pipeline.stages
)
FOLLOW_block_in_atom1379
(in
mexpParser
)
FULLY_REL
(in
UPFParser
)
filterList()
(in
SelectingFilteredListWidget
)
FOLLOW_block_in_prog160
(in
mexpParser
)
func
(in
Descriptor
)
filterNames()
(in
PropertySelector
)
FOLLOW_BOPEN_in_comp1152
(in
mexpParser
)
func()
(in
schrodinger.application.mopac.results2012
)
FilterReporter
(in
schrodinger.structutils.smilesfilter
)
FOLLOW_CCLOSE_in_atom1381
(in
mexpParser
)
FUNCNOTAVAIL
(in
_licensing'
)
filterRowsByExcitedState()
(in
PropertiesTabBase
)
FOLLOW_COLON_in_iter1484
(in
mexpParser
)
FUNCNOTAVAIL
(in
schrodinger.infra.licensing
)
filterSelectionChanged()
(in
PropFilterDialog
)
FOLLOW_COMMA_in_decl_meta358
(in
mexpParser
)
funct
(in
_FFIOAngle
)
filterSelectionChanged()
(in
LigfilterFrame
)
FOLLOW_COMMA_in_decl_output305
(in
mexpParser
)
funct
(in
_FFIOBond
)
filterSmilesFile()
(in
SubSetStage
)
FOLLOW_COMMA_in_fcnCall1192
(in
mexpParser
)
funct
(in
_FFIOConstraint
)
final
(in
Scan
)
FOLLOW_COMMA_in_series1401
(in
mexpParser
)
funct
(in
_FFIODihedral
)
FINAL_VAL
(in
ScanCoordinateColumns
)
FOLLOW_COMMA_in_static251
(in
mexpParser
)
funct
(in
_FFIOPair
)
finalize()
(in
_pyepik'
)
FOLLOW_comp_in_expComp1129
(in
mexpParser
)
funct
(in
_FFIORestraint
)
finalize()
(in
JobAdapter
)
FOLLOW_COPEN_in_atom1376
(in
mexpParser
)
funct
(in
_FFIOVdwtype
)
finalize()
(in
schrodinger.application.epik.pyepik
)
FOLLOW_decl_in_header191
(in
mexpParser
)
funct
(in
_FFIOVdwtypescombined
)
finalize()
(in
BaseJob
)
FOLLOW_decl_meta_in_decl222
(in
mexpParser
)
funct
(in
_FFIOVirtual
)
finalize()
(in
sketcherLID
)
FOLLOW_decl_output_in_decl226
(in
mexpParser
)
funct
(in
_FFAngle
)
find()
(in
TreeWizard
)
FOLLOW_EIGENVECTOR_ACTIVE
(in
schrodinger.application.jaguar.reactiq_input_constants
)
funct
(in
_FFBond
)
find()
(in
HydrogenBondFinder
)
FOLLOW_EIGENVECTOR_CHOICES
(in
schrodinger.application.jaguar.reactiq_input_constants
)
funct
(in
_FFConstraint
)
find()
(in
ParamTable
)
FOLLOW_EIGENVECTOR_DEFAULT
(in
schrodinger.application.jaguar.reactiq_input_constants
)
funct
(in
_FFDihedral
)
find()
(in
SaltBridgeFinder
)
FOLLOW_EIGENVECTOR_LOWEST
(in
schrodinger.application.jaguar.reactiq_input_constants
)
funct
(in
_FFPair
)
find()
(in
StringStringMap
)
FOLLOW_EIGENVECTOR_NONTORSION
(in
schrodinger.application.jaguar.reactiq_input_constants
)
funct
(in
_FFRestraint
)
find_alchemistry_and_type()
(in
FEPReport
)
FOLLOW_EIGENVECTOR_STRETCH
(in
schrodinger.application.jaguar.reactiq_input_constants
)
funct
(in
_FFVdwtype
)
find_all_entries()
(in
schrodinger.application.bioluminate.pml_menus
)
FOLLOW_EOF_in_prog162
(in
mexpParser
)
funct
(in
_FFVirtual
)
find_all_fragment_pairs()
(in
schrodinger.application.desmond.fep_mapping
)
FOLLOW_EQ_in_bind1029
(in
mexpParser
)
functional()
(in
schrodinger.application.jaguar.textparser
)
find_all_table_entry_objects()
(in
schrodinger.application.bioluminate.pml_menus
)
FOLLOW_EQ_in_iter1478
(in
mexpParser
)
fuseIonFragment()
(in
Ionizer
)
find_atom_type()
(in
Packing
)
FOLLOW_EQ_in_meta_term600
(in
mexpParser
)
FUTURE_FILE
(in
_licensing'
)
find_atoms_closest_to_atoms()
(in
schrodinger.application.matsci.clusterstruct
)
FOLLOW_EQ_in_meta_term671
(in
mexpParser
)
FUTURE_FILE
(in
schrodinger.infra.licensing
)
find_atoms_near_point()
(in
schrodinger.application.matsci.reorder
)
FOLLOW_EQ_in_meta_term728
(in
mexpParser
)
FVAL_DICT
(in
ParserWrapper
)
find_atoms_to_remove()
(in
schrodinger.application.matsci.buildcomplex
)
FOLLOW_EQ_in_meta_term792
(in
mexpParser
)
FVAL_KEYS
(in
ParserWrapper
)
find_best_core_match()
(in
schrodinger.application.canvas.r_group
)
FOLLOW_EQ_in_meta_term855
(in
mexpParser
)
FVAL_VALUES
(in
ParserWrapper
)
find_block()
(in
Block
)
FOLLOW_EQ_in_meta_term927
(in
mexpParser
)
FVALINCREMENT
(in
ReactionPath
)
find_buddies_on_other_surf()
(in
schrodinger.application.bioluminate.surfcomp
)
FOLLOW_EQ_in_output_term412
(in
mexpParser
)
fxnname()
(in
schrodinger.infra.propedit
)
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2016-4 Schrodinger Python API
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