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2016-4 Schrodinger Python API
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Identifier Index
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L
L_INDEX_DEFAULT
(in
schrodinger.application.matsci.nano.slab
)
ligand1_cpx_sid_psa()
(in
FEPEdgeData
)
loadSettings()
(in
InputTabHB
)
L_INDEX_KEY
(in
schrodinger.application.matsci.nano.slab
)
ligand1_cpx_sid_rb_strain()
(in
FEPEdgeData
)
loadSettings()
(in
InputTabPka
)
L_INDEX_MAX_DEFAULT
(in
schrodinger.application.matsci.nano.slab
)
ligand1_cpx_sid_rgyr()
(in
FEPEdgeData
)
loadSettings()
(in
IrcTab
)
L_INDEX_MIN_DEFAULT
(in
schrodinger.application.matsci.nano.slab
)
ligand1_cpx_sid_rmsd()
(in
FEPEdgeData
)
loadSettings()
(in
MoleculeTab
)
LA()
(in
DebugTokenStream
)
ligand1_cpx_sid_sasa()
(in
FEPEdgeData
)
loadSettings()
(in
MoleculeTabBase
)
LA()
(in
ANTLRStringStream
)
ligand1_cpx_sid_waters()
(in
FEPEdgeData
)
loadSettings()
(in
MoleculeTabPka
)
LA()
(in
CommonTokenStream
)
ligand1_fragments()
(in
FEPEdgeData
)
loadSettings()
(in
MultiStructureTab
)
LA()
(in
IntStream
)
ligand1_hash
(in
FEPEdgeData
)
loadSettings()
(in
OptimizationTab
)
LA()
(in
CommonTreeNodeStream
)
ligand1_mol_formula
(in
FEPEdgeData
)
loadSettings()
(in
OutputTab
)
label
(in
Descriptor
)
ligand1_name
(in
FEPEdgeData
)
loadSettings()
(in
BaseSubTab
)
label
(in
KptLegend
)
ligand1_pdb_name
(in
FEPEdgeData
)
loadSettings()
(in
ESPSubTab
)
Label
(in
schrodinger.ui.widget.tkinterwidget
)
ligand1_rot_bonds
(in
FEPEdgeData
)
loadSettings()
(in
MullikenSubTab
)
label_color
(in
schrodinger.protein.assignment
)
ligand1_smiles
(in
FEPEdgeData
)
loadSettings()
(in
MultipoleSubTab
)
label_color
(in
_StructureAtom
)
ligand1_sol_sid_lighb()
(in
FEPEdgeData
)
loadSettings()
(in
PolarizabilitySubTab
)
LABEL_FONT_NAME
(in
schrodinger.application.phase.phase_markers
)
ligand1_sol_sid_molsa()
(in
FEPEdgeData
)
loadSettings()
(in
PropertiesTabBase
)
label_format
(in
_StructureAtom
)
ligand1_sol_sid_psa()
(in
FEPEdgeData
)
loadSettings()
(in
RamanSubTab
)
label_pbc_bond()
(in
schrodinger.application.matsci.nano.xtal
)
ligand1_sol_sid_rb_strain()
(in
FEPEdgeData
)
loadSettings()
(in
SurfacesSubTab
)
label_pbc_bonds()
(in
schrodinger.application.matsci.nano.xtal
)
ligand1_sol_sid_rgyr()
(in
FEPEdgeData
)
loadSettings()
(in
VibrationalSubTab
)
label_user_text
(in
_StructureAtom
)
ligand1_sol_sid_rmsd()
(in
FEPEdgeData
)
loadSettings()
(in
ScanTab
)
labelAsuAtoms()
(in
Crystal
)
ligand1_sol_sid_sasa()
(in
FEPEdgeData
)
loadSettings()
(in
ScfTab
)
LabelAtom
(in
schrodinger.application.bioluminate.pml_menus
)
ligand1_st
(in
FEPEdgeData
)
loadSettings()
(in
ScfTabIGO
)
LabelAtomByEntryIndex
(in
schrodinger.application.bioluminate.pml_menus
)
ligand1_total_atoms
(in
FEPEdgeData
)
loadSettings()
(in
SolvationTab
)
LabelAtomByMolIndex
(in
schrodinger.application.bioluminate.pml_menus
)
ligand1_total_fragments
(in
FEPEdgeData
)
loadSettings()
(in
SolventPkaTab
)
LabelAtomByNumType
(in
schrodinger.application.bioluminate.pml_menus
)
ligand1_total_heavy
(in
FEPEdgeData
)
loadSettings()
(in
SolventTab
)
LabelAtomByOccupancy
(in
schrodinger.application.bioluminate.pml_menus
)
ligand1_total_hot
(in
FEPEdgeData
)
loadSettings()
(in
TheoryTab
)
LabelAtomByProp
(in
schrodinger.application.bioluminate.pml_menus
)
ligand1_total_rot_bonds
(in
FEPEdgeData
)
loadSettings()
(in
TransitionStateMixin
)
LabelAtomByStereo
(in
schrodinger.application.bioluminate.pml_menus
)
ligand2_atomic_mass
(in
FEPEdgeData
)
loadSettings()
(in
ExcitedStateWidget
)
LabelAtomByVDW
(in
schrodinger.application.bioluminate.pml_menus
)
ligand2_charge
(in
FEPEdgeData
)
loadSettings()
(in
SpinExcitedStateController
)
LabelAtomIdentSubMenu
(in
schrodinger.application.bioluminate.pml_menus
)
ligand2_cpx_asl
(in
FEPEdgeData
)
loadSettings()
(in
SpinTreatmentWidget
)
labelAtoms()
(in
WorkspaceLabeler
)
ligand2_cpx_sid_lighb()
(in
FEPEdgeData
)
loadSettingsFromKeywords()
(in
EmbeddedSolventWidget
)
LabelCell
(in
schrodinger.ui.widgettable
)
ligand2_cpx_sid_molsa()
(in
FEPEdgeData
)
loadSkippedLigs()
(in
GlideDB
)
LabelChains
(in
schrodinger.application.bioluminate.pml_menus
)
ligand2_cpx_sid_psa()
(in
FEPEdgeData
)
loadSpecies()
(in
MonomerSpeciesSelector
)
labelChains()
(in
WorkspaceLabeler
)
ligand2_cpx_sid_rb_strain()
(in
FEPEdgeData
)
loadStructIntoStructView()
(in
BaseInteractiveEnumeration
)
LabelColumn
(in
schrodinger.ui.widgettable
)
ligand2_cpx_sid_rgyr()
(in
FEPEdgeData
)
loadStructures()
(in
ReorderAtomPanel
)
labeler
(in
schrodinger.application.bioluminate.pml_menus
)
ligand2_cpx_sid_rmsd()
(in
FEPEdgeData
)
loadTemplate()
(in
SketcherBox
)
LabelFrame
(in
schrodinger.ui.widget.tkinterwidget
)
ligand2_cpx_sid_sasa()
(in
FEPEdgeData
)
loadToggled()
(in
NewJobDirFrame
)
labelLigAtm()
(in
ProtLigInteractionFinder
)
ligand2_cpx_sid_waters()
(in
FEPEdgeData
)
LoadVisFile()
(in
schrodinger.analysis.visanalysis.volumedataio
)
labelLigFrag()
(in
ProtLigInteractionFinder
)
ligand2_fragments()
(in
FEPEdgeData
)
loadWaterMapMode()
(in
sketcher
)
LabelMenu
(in
schrodinger.application.bioluminate.pml_menus
)
ligand2_hash
(in
FEPEdgeData
)
LoadXYZ()
(in
schrodinger.application.desmond.packages.msys
)
LabelOtherSubMenu
(in
schrodinger.application.bioluminate.pml_menus
)
ligand2_mol_formula
(in
FEPEdgeData
)
loadZoomStruct()
(in
BaseInteractiveEnumeration
)
labelProtAtm()
(in
HydrophobicContactFinder
)
ligand2_name
(in
FEPEdgeData
)
LOCAL
(in
schrodinger.application.desmond.starter.ui.cmdline
)
labelProtAtm()
(in
ProtLigInteractionFinder
)
ligand2_pdb_name
(in
FEPEdgeData
)
LOCAL
(in
schrodinger.test.stu.sysinfo
)
labelProtAtm()
(in
SaltBridgeFinder
)
ligand2_rot_bonds
(in
FEPEdgeData
)
LOCAL
(in
schrodinger.utils.cmdline
)
labelProtRes()
(in
HydrophobicContactFinder
)
ligand2_smiles
(in
FEPEdgeData
)
LOCAL_APPDATA
(in
schrodinger.utils.fileutils
)
labelProtRes()
(in
ProtLigInteractionFinder
)
ligand2_sol_sid_lighb()
(in
FEPEdgeData
)
local_atom
(in
Report
)
LabelResidues
(in
schrodinger.application.bioluminate.pml_menus
)
ligand2_sol_sid_molsa()
(in
FEPEdgeData
)
LOCAL_HOST
(in
schrodinger.application.matsci.mecp_mod
)
labelResidues()
(in
WorkspaceLabeler
)
ligand2_sol_sid_psa()
(in
FEPEdgeData
)
local_pol_alea_prop
(in
MopacResults71
)
LABELS
(in
QualitySlider
)
ligand2_sol_sid_rb_strain()
(in
FEPEdgeData
)
local_pol_alie_prop
(in
MopacResults71
)
labels()
(in
SideBySideToggle
)
ligand2_sol_sid_rgyr()
(in
FEPEdgeData
)
local_pol_esp_prop
(in
MopacResults71
)
LabelSpinner
(in
schrodinger.application.desmond.feputils
)
ligand2_sol_sid_rmsd()
(in
FEPEdgeData
)
local_protein
(in
Report
)
labelSymEquivPos()
(in
Crystal
)
ligand2_sol_sid_sasa()
(in
FEPEdgeData
)
local_residue
(in
Report
)
lambda_type()
(in
schrodinger.application.desmond.config
)
ligand2_st
(in
FEPEdgeData
)
LOCAL_RUN
(in
schrodinger.job.launcher
)
LambdaHopping
ligand2_total_atoms
(in
FEPEdgeData
)
local_server_files()
(in
schrodinger.application.licensing.licadmin
)
languageChange()
(in
DendrogramView
)
ligand2_total_fragments
(in
FEPEdgeData
)
local_server_resource()
(in
schrodinger.application.licensing.licadmin
)
languageChange()
(in
MM_QDockWidget
)
ligand2_total_heavy
(in
FEPEdgeData
)
local_server_resources()
(in
schrodinger.application.licensing.licadmin
)
languageChange()
(in
MM_QLineEdit
)
ligand2_total_hot
(in
FEPEdgeData
)
LOCALFILTER
(in
_licensing'
)
languageChange()
(in
SHView
)
ligand2_total_rot_bonds
(in
FEPEdgeData
)
LOCALFILTER
(in
schrodinger.infra.licensing
)
languageChange()
(in
sketcher
)
ligand_action
(in
ConsensusToolBar
)
LOCALHOST
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
languageChange()
(in
sketcherGUIMultiColumnToolBar
)
ligand_asl
(in
Ligand
)
localhost
(in
ResultReporter
)
languageChange()
(in
sketcherView
)
LIGAND_FEP_MENUS
(in
_mmutil'
)
LocalhostJob
(in
schrodinger.job.queue
)
lanthanide_series
(in
schrodinger.application.prime.primefix
)
LIGAND_FEP_MENUS
(in
schrodinger.utils.mmutil
)
LOCALIZATION_METHODS
(in
ScfTab
)
LARGE_FRAG_ON_RING
(in
schrodinger.application.desmond.r_group_asl
)
LIGAND_MUTATION
(in
schrodinger.application.desmond.fep_gui
)
LocalServerProcess
(in
schrodinger.application.licensing.licadmin
)
LARGE_RHO_K
(in
BFGS
)
ligand_torsions
(in
FEPEdgeData
)
locate_pymol()
(in
schrodinger.utils.fileutils
)
last_added_entry
(in
Project
)
LigandActionMixin
(in
schrodinger.application.bioluminate.pml_menus
)
locateAndRotate()
(in
AmorphousCellBuilder
)
last_entry_unique_id
(in
NewEntry
)
ligandfiles
(in
DockingJob
)
location()
(in
DebugEventListener
)
LAST_ERRNO
(in
_licensing'
)
LigandPreset
(in
schrodinger.application.bioluminate.pml_menus
)
location()
(in
DebugEventSocketProxy
)
LAST_ERRNO
(in
schrodinger.infra.licensing
)
ligandReader()
(in
DockingJob
)
location()
(in
TraceDebugEventListener
)
last_issued()
(in
License
)
ligandResiduesChanged()
(in
WorkspaceHub
)
location()
(in
LicenseResource
)
LAST_LOGGED_IN_SERVER
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.utils_shell
)
LigandRMSD
(in
schrodinger.trajectory.analysis
)
LOCK
(in
Icons
)
last_logtime
(in
schrodinger.application.desmond.cmj
)
LigandSitesSubMenu
(in
schrodinger.application.bioluminate.pml_menus
)
lock()
(in
ModelBase
)
LASTCT
(in
schrodinger.application.macromodel.paraUtils
)
ligfilter
(in
schrodinger.ui
)
lock_protonation()
(in
amine_changeable
)
Lattice
(in
schrodinger.protein._reliability
)
ligfilter
(in
schrodinger.utils
)
lock_protonation()
(in
carboxyl_changeable
)
LATTICE_PARAM_KEYS
(in
schrodinger.application.matsci.nano.surfaces_interfaces_mod
)
ligfilter_definition_dialog_ui
(in
schrodinger.ui
)
lock_protonation()
(in
changeable
)
LATTICE_PARAMS_KEYS
(in
schrodinger.application.matsci.nano.xtal
)
ligfilter_ui
(in
schrodinger.ui
)
lock_protonation()
(in
histidine_changeable
)
launch()
(in
Job
)
LigfilterFrame
(in
schrodinger.ui.ligfilter
)
lock_protonation()
(in
rotatable_changeable
)
launch()
(in
Startup
)
LigFilterStage
(in
schrodinger.pipeline.stages.filtering
)
lock_protonation_states()
(in
ProtAssign
)
launch()
(in
GlideLauncher
)
ligFormat()
(in
DockingJob
)
LOCKED_IN_WORKSPACE
(in
schrodinger.project
)
launch()
(in
JaguarInput
)
LIGHT
(in
FullColumns
)
lockedColumns()
(in
BaseAlignment
)
launch()
(in
Launcher
)
LIGHT_FR_IDEN
(in
FullColumns
)
LockedProjectException
(in
schrodinger.project
)
launch()
(in
schrodinger.job.launcher
)
LIGHT_FR_SIM
(in
FullColumns
)
lockToggled()
(in
_SdMasterjob
)
LAUNCH_FAILURE
(in
JobStatus
)
LIGHT_IDEN
(in
FullColumns
)
log
(in
schrodinger.application.licensing.flexlm
)
launch_file()
(in
schrodinger.application.jaguar.input
)
LIGHT_SIM
(in
FullColumns
)
log
(in
schrodinger.application.licensing.licadmin
)
launch_from_job_spec()
(in
schrodinger.job.jobcontrol
)
LIGHTBLUE
(in
schrodinger.application.bioluminate.pml_menus
)
log
(in
schrodinger.application.licensing.lmgrd_log_parser
)
launch_job()
(in
schrodinger.job.jobcontrol
)
LIGHTBLUE
(in
schrodinger.application.matsci.amorphous
)
log
(in
schrodinger.utils
)
launch_local_job()
(in
schrodinger.job.launcher
)
ligprep
(in
schrodinger.application
)
log()
(in
DebugEventSocketProxy
)
launch_pre_analysis()
(in
schrodinger.application.bioluminate.patch_utils.patch_finder
)
ligprep
(in
schrodinger.application.vsw.stages
)
log()
(in
BuilderWithClashDetection
)
launch_SID()
(in
FEPReport
)
ligprep
(in
schrodinger.pipeline.stages
)
log()
(in
Step
)
launch_subjobs()
(in
schrodinger.application.macromodel.paraUtils
)
LIGPREP3_FAILURE
(in
schrodinger.infra.mm
)
log()
(in
WorkFlow
)
launchapi
(in
schrodinger.job
)
ligprep3_initialize
(in
schrodinger.infra.mm
)
log()
(in
Metropolizer
)
launchBackend()
(in
App
)
LIGPREP3_SUCCESS
(in
schrodinger.infra.mm
)
log()
(in
schrodinger.application.matsci.textlogger
)
launcher
(in
schrodinger.job
)
ligprep3_terminate
(in
schrodinger.infra.mm
)
log()
(in
App
)
Launcher
(in
schrodinger.job.launcher
)
LigPrep3Volumizer
(in
schrodinger.infra.fast3d
)
log()
(in
schrodinger.pipeline.pipeline
)
launchFromJobSpec()
(in
MultiJobApp
)
LigPrep3Volumizer_swiginit()
(in
_fast3d'
)
log()
(in
Stage
)
launchJaguarJob()
(in
BaseJaguarPanel
)
LigPrep3Volumizer_swigregister()
(in
_fast3d'
)
log1p
(in
schrodinger.protein.assignment
)
launchJobarray()
(in
JobarrayRunner
)
LIGPREP_MAIN
(in
_licensing'
)
log_banner()
(in
schrodinger.utils.installation_check
)
LaunchParameters
(in
schrodinger.job.launchparams
)
LIGPREP_MAIN
(in
schrodinger.infra.licensing
)
LOG_BASIC
(in
schrodinger.protein.assignment
)
launchparams
(in
schrodinger.job
)
LIGPREP_MAIN
(in
schrodinger.infra.mm
)
LOG_DEBUG
(in
schrodinger.protein.assignment
)
layOut()
(in
CoordinateMarkerMixin
)
LigPrepStage
(in
schrodinger.pipeline.stages.ligprep
)
log_deleted_lines()
(in
License
)
layOut()
(in
NewJobDirDialog
)
LigWriter
(in
schrodinger.application.glide.packages.driver
)
log_displacements()
(in
schrodinger.application.matsci.mecp_mod
)
layOut()
(in
StageFrame
)
LIME
(in
schrodinger.application.bioluminate.pml_menus
)
log_energy_and_forces()
(in
schrodinger.application.matsci.mecp_mod
)
layOut()
(in
ReorderAtomPanel
)
LIME
(in
schrodinger.application.matsci.amorphous
)
LOG_EXTRA
(in
schrodinger.protein.assignment
)
layOut()
(in
MSVPanel
)
line
(in
schrodinger.application.bioluminate.pml_menus
)
log_file()
(in
JobOutput
)
layOut()
(in
BaseWelcome
)
line
(in
CommonTree
)
log_filename
(in
DockingJobFilenameMixin
)
LAYOUT_ROW_PADDING
(in
schrodinger.application.msv.gui.view_dialog
)
line
(in
schrodinger.application.prime.input
)
log_filename
(in
CombinedJob
)
LayoutDirection
LINE
(in
schrodinger.graphics3d.common
)
log_filepath
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.logger_shell
)
LayoutMixin
(in
schrodinger.Qt.QtWidgets
)
line_enumerate
(in
schrodinger.application.jaguar.textparser
)
LOG_FULL_DEBUG
(in
schrodinger.protein.assignment
)
LayoutMode
line_match_final_log()
(in
schrodinger.application.desmond.replica_exchange_review
)
log_geometry()
(in
schrodinger.application.matsci.mecp_mod
)
LB()
(in
CommonTokenStream
)
LINE_ORDER
(in
MSJStringer
)
log_initial_data()
(in
schrodinger.application.matsci.textlogger
)
LB()
(in
CommonTreeNodeStream
)
line_search_wolfe12()
(in
BFGS
)
log_jobinfo()
(in
schrodinger.application.matsci.textlogger
)
lcm_approx()
(in
schrodinger.application.matsci.nano.interface_mod
)
line_width
(in
Box
)
log_namespace()
(in
schrodinger.application.matsci.textlogger
)
LD_LIBRARY_PATH
(in
schrodinger.utils.env
)
LINEAR_BEND_TOL
(in
schrodinger.infra.mm
)
LOG_NONE
(in
schrodinger.protein.assignment
)
ldexp
(in
schrodinger.protein.assignment
)
linear_equation()
(in
Rectangle
)
LOG_SCORE_DEBUG
(in
schrodinger.protein.assignment
)
ldir
(in
schrodinger.application.combiglide.combenumdock
)
LINEAR_SCALING
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
log_vector()
(in
schrodinger.application.matsci.mecp_mod
)
LE_WIDTH
(in
SimOptionsFrame
)
LinearError
logActivity()
(in
PhpProject
)
LEAK_VERSIONS
(in
LicenseResource
)
LinearWriter
(in
schrodinger.pipeline.input
)
logaddexp
(in
schrodinger.protein.assignment
)
leave_scope()
(in
binding
)
lineEditUpdated()
(in
MutationSelectorPopUp
)
logaddexp2
(in
schrodinger.protein.assignment
)
leaveEvent()
(in
ColorLabel
)
LineIntersectsTriangle()
(in
schrodinger.application.desmond.packages.msys
)
logEnergyAndForces()
(in
MECPStep
)
leaveEvent()
(in
StructureLabel
)
lines
(in
schrodinger.application.bioluminate.sliderchart
)
logfile()
(in
LicenseResource
)
leaveEvent()
(in
DendrogramView
)
lines
(in
schrodinger.application.desmond.gchart
)
logger
(in
schrodinger.analysis.enrichment
)
leaveEvent()
(in
MM_QDockWidget
)
lines
(in
schrodinger.application.desmond.mplchart
)
logger
(in
schrodinger.application.canvas.r_group
)
leaveEvent()
(in
MM_QLineEdit
)
lines
(in
schrodinger.graphics3d
)
logger
(in
schrodinger.application.canvas.r_group_dee
)
leaveEvent()
(in
SHView
)
Lines
(in
schrodinger.graphics3d.lines
)
logger
(in
schrodinger.application.canvas.topo_descriptors
)
leaveEvent()
(in
sketcher
)
lines_in_file()
(in
schrodinger.test.stu.outcomes.standard_workups
)
logger
(in
schrodinger.application.desmond.energygroup
)
leaveEvent()
(in
sketcherGUIMultiColumnToolBar
)
lineterminator
(in
chm_bluebird
)
logger
(in
schrodinger.application.desmond.fep_mapping
)
leaveEvent()
(in
sketcherView
)
lineterminator
(in
chm_excel
)
logger
(in
schrodinger.application.desmond.fep_net_charge
)
left()
(in
WidgetTable
)
LINK_TO_TXT
(in
schrodinger.application.combiglide.combenumdock
)
logger
(in
schrodinger.application.desmond.fep_util
)
left_shift
(in
schrodinger.protein.assignment
)
LINK_TO_URL
(in
schrodinger.application.combiglide.combenumdock
)
logger
(in
schrodinger.application.desmond.fepdiff
)
leftAndMidButton()
(in
sketcherScene
)
LINKAGE_TYPES
(in
CanvasFingerprintCluster
)
logger
(in
schrodinger.application.desmond.r_group_asl
)
leftAndRightButton()
(in
sketcherScene
)
LinkedList
(in
schrodinger.job.queue
)
logger
(in
schrodinger.application.glide.packages.driver
)
leftButton()
(in
sketcherScene
)
LinkedListNode
(in
schrodinger.job.queue
)
logger
(in
schrodinger.application.glide.packages.startup
)
leftClicked()
(in
editableViewerTable
)
linkFollowed()
(in
ExceptionDialog
)
logger
(in
schrodinger.application.glide.poseviewconvert
)
LegacySequenceConverter
(in
schrodinger.application.msv.io.converters
)
LINUX
(in
schrodinger.utils.preferences
)
logger
(in
schrodinger.application.glide.xpdes
)
LegacySequenceConverter
(in
schrodinger.application.msv.io.seqio
)
lipid_analysis
(in
schrodinger.trajectory
)
logger
(in
schrodinger.application.jaguar.input
)
LENGTH
(in
NanoTube
)
LIPID_FF
(in
_mmutil'
)
logger
(in
schrodinger.application.jaguar.rmsd
)
LENGTH
(in
schrodinger.application.matsci.shapes
)
LIPID_FF
(in
schrodinger.utils.mmutil
)
logger
(in
schrodinger.application.phase.hypothesis
)
length
(in
_StructureBond
)
list
LOGGER
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.logger_shell
)
length
(in
Grid3D
)
List
(in
schrodinger.application.desmond.mdkey
)
logger
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.utils_shell
)
lengthAboutToChange()
(in
Sequence
)
LIST
(in
schrodinger.application.desmond.starter.ui.cmdline
)
logger
(in
schrodinger.application.prime.primefix
)
lengthChanged()
(in
Sequence
)
LIST
(in
schrodinger.utils.cmdline
)
logger
(in
schrodinger.application.vsw.vswinput
)
LENGTHS_AND_ANGLES_PROPERTIES
(in
_structure'
)
List
(in
schrodinger.utils.sea
)
logger
(in
schrodinger.job.app
)
LENGTHS_AND_ANGLES_PROPERTIES
(in
schrodinger.infra.structure
)
list2jmonitorcmdline()
(in
schrodinger.job.jobcontrol
)
logger
(in
schrodinger.job.hunt_cache
)
LENGTHS_ONE_UNIQUE
(in
CrystalSystems
)
list2str()
(in
schrodinger.application.desmond.meta
)
logger
(in
schrodinger.job.hunt_stub
)
LENGTHS_THREE_UNIQUE
(in
CrystalSystems
)
list2str()
(in
_BaseClient
)
logger
(in
schrodinger.job.jobapi
)
LENGTHS_TWO_UNIQUE
(in
CrystalSystems
)
list_to_string()
(in
schrodinger.application.matsci.nano.interface_mod
)
logger
(in
schrodinger.job.jobcontrol
)
LENNARD_JONES
(in
schrodinger.application.matsci.coarsegrain
)
LIST_VALUES
(in
schrodinger.test.stu.testscripts
)
logger
(in
schrodinger.job.queue
)
less
(in
schrodinger.protein.assignment
)
listAllNodes()
(in
DendrogramGraphicTree
)
logger
(in
schrodinger.job.remote_command
)
less_equal
(in
schrodinger.protein.assignment
)
Listbox
(in
schrodinger.ui.widget.tkinterwidget
)
logger
(in
schrodinger.pipeline.stage
)
LESS_THAN
(in
Property
)
listElements()
(in
schrodinger.infra.propedit
)
logger
(in
schrodinger.protein._reliability
)
LESSER
(in
schrodinger.application.bioluminate.propfilter
)
listOfAtomRGroups()
(in
sketcher
)
logger
(in
schrodinger.structutils.analyze
)
LESSEREQUAL
(in
schrodinger.application.bioluminate.propfilter
)
ListParam
(in
schrodinger.tasks.parameters
)
logger
(in
schrodinger.structutils.assignbondorders
)
lessThan()
(in
FullProxyModel
)
listProps()
(in
schrodinger.infra.propedit
)
logger
(in
schrodinger.structutils.createfragments
)
lessThan()
(in
SubTabProxyModel
)
LIT
(in
schrodinger.application.desmond.enhanced_sampling.mexpLexer
)
logger
(in
schrodinger.structutils.rmsd
)
Let
(in
schrodinger.application.desmond.enhsamp
)
LIT
(in
schrodinger.application.desmond.enhanced_sampling.mexpParser
)
logger
(in
schrodinger.structutils.sort
)
letUserSelectValues()
(in
PropFilterDialog
)
Lit
(in
schrodinger.application.desmond.enhsamp
)
logger
(in
schrodinger.structutils.structalign
)
LEUCINE
(in
schrodinger.application.msv.domain.residue
)
little_endian
(in
schrodinger.protein.assignment
)
logger
(in
schrodinger.structutils.transform
)
level
(in
LicenseError
)
lj14_energy()
(in
schrodinger.application.qsite.output
)
logger
(in
schrodinger.test.stu.base_executable
)
Level
(in
schrodinger.infra.mmerr
)
lj_energy()
(in
schrodinger.application.qsite.output
)
logger
(in
schrodinger.test.stu.client
)
level()
(in
ErrorHandler
)
llmd()
(in
ComUtil
)
logger
(in
schrodinger.test.stu.outcomes.custom.perceptual_diff
)
LEVEL_OF_DETAIL_CALLBACK
(in
schrodinger.maestro.maestro
)
lmdiag()
(in
LicenseResource
)
logger
(in
schrodinger.test.stu.outcomes.job_status
)
level_of_detail_callback_add()
(in
schrodinger.maestro.maestro
)
LMGRD_ALTLOG
(in
schrodinger.application.licensing.licadmin
)
logger
(in
schrodinger.test.stu.outcomes.standard_workups
)
level_of_detail_callback_remove()
(in
schrodinger.maestro.maestro
)
LMGRD_ERROR
(in
schrodinger.application.licensing.licadmin
)
logger
(in
schrodinger.test.stu.outcomes.structure_comparisons
)
Lexer
(in
schrodinger.application.desmond.antlr3.recognizers
)
LMGRD_EVENTS
(in
schrodinger.application.licensing.licadmin
)
logger
(in
schrodinger.test.stu.run
)
LexerMain
(in
schrodinger.application.desmond.antlr3.main
)
LMGRD_INFO
(in
schrodinger.application.licensing.licadmin
)
logger
(in
schrodinger.test.stu.testscripts
)
LGEN_VER
(in
_licensing'
)
lmgrd_lines()
(in
schrodinger.application.licensing.licadmin
)
logger
(in
schrodinger.test.stu.workup
)
LGEN_VER
(in
schrodinger.infra.licensing
)
LMGRD_LOG
(in
schrodinger.application.licensing.licadmin
)
logger
(in
schrodinger.trajectory.analyze_trajectories
)
LIAISON_MAIN
(in
_licensing'
)
lmgrd_log_parser
(in
schrodinger.application.licensing
)
logger
(in
schrodinger.utils.documentation
)
LIAISON_MAIN
(in
schrodinger.infra.licensing
)
lmod()
(in
ComUtil
)
logger
(in
schrodinger.utils.installation_check
)
LIAISON_MAIN
(in
schrodinger.infra.mm
)
lmp2()
(in
schrodinger.application.jaguar.textparser
)
logger
(in
schrodinger.utils.pymol
)
LIB
(in
schrodinger.application.glide.glide
)
LMP2_KEYWORDS
(in
TheoryTab
)
logger_shell
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir
)
LIB_SD
(in
schrodinger.application.glide.glide
)
LMP2_ROWS
(in
PropertiesTabBase
)
LOGGING_LEVEL
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.logger_shell
)
libc
(in
schrodinger.test.darwinconsole
)
lmstat()
(in
LicenseResource
)
logging_summary_callback()
(in
schrodinger.application.matsci.genetic_optimization.genetic_optimization
)
libc_path
(in
schrodinger.test.darwinconsole
)
LMUTIL
(in
schrodinger.utils.sysinfo
)
logHeader()
(in
EnergyAndGradients
)
LIBRARYMISMATCH
(in
_licensing'
)
LO
(in
schrodinger.pipeline.stages.filtering
)
logHessianEigVals()
(in
MECPStep
)
LIBRARYMISMATCH
(in
schrodinger.infra.licensing
)
lo_precision
(in
JaguarResults
)
logical_and
(in
schrodinger.protein.assignment
)
LIBUNWIND_PROFILER
(in
_mmutil'
)
Load()
(in
schrodinger.application.desmond.packages.msys
)
logical_not
(in
schrodinger.protein.assignment
)
LIBUNWIND_PROFILER
(in
schrodinger.utils.mmutil
)
load()
(in
FrameLoader
)
logical_or
(in
schrodinger.protein.assignment
)
licadmin
(in
schrodinger.application.licensing
)
load_arrows()
(in
schrodinger.trajectory.prody.test_arrow
)
logical_xor
(in
schrodinger.protein.assignment
)
License
(in
schrodinger.application.licensing.flexlm
)
load_data()
(in
CalcBAR
)
login_button_clicked()
(in
CredentialsDialogShell
)
License
(in
schrodinger.infra.licensing
)
load_frame()
(in
schrodinger.trajectory.rmsd2d
)
login_to_server()
(in
CredentialsDialogShell
)
license
(in
schrodinger.utils
)
load_graph()
(in
Analysis
)
logInitialGeometry()
(in
MECPStep
)
License
(in
schrodinger.utils.license
)
load_gui()
(in
schrodinger.application.desmond.report_helper
)
logistic()
(in
schrodinger.application.desmond.bennett
)
LICENSE_ACTIONS
(in
schrodinger.application.licensing.licadmin
)
load_job_products()
(in
schrodinger.application.licensing.licadmin
)
logistic_full()
(in
schrodinger.application.desmond.bennett
)
license_check()
(in
schrodinger.test.stu.outcomes.job_status
)
load_job_reqs()
(in
schrodinger.application.licensing.licadmin
)
logistic_function()
(in
schrodinger.application.desmond.bennett
)
LICENSE_CHECK_FILE
(in
schrodinger.test.stu.constants
)
load_keywords()
(in
schrodinger.application.jaguar.keywordDB
)
logistic_function_full()
(in
schrodinger.application.desmond.bennett
)
License_checkin()
(in
_licensing'
)
load_shared_library()
(in
schrodinger.application.desmond.packages.msys.molfile
)
logJobData()
(in
MECPStep
)
license_class()
(in
License
)
load_system()
(in
_EneFile
)
LOGLEVEL
(in
schrodinger.application.desmond.cmj
)
license_description()
(in
License
)
loadAccuracyAndInitialGuessSettings()
(in
ScfTab
)
logn()
(in
schrodinger.pipeline.pipeline
)
license_directory()
(in
schrodinger.application.licensing.licadmin
)
LoadCNSFile()
(in
schrodinger.analysis.visanalysis.volumedataio
)
lognoret()
(in
Stage
)
LICENSE_DIRNAME
(in
schrodinger.application.licensing.licadmin
)
loadCoarseGrainMode()
(in
sketcher
)
lognotret()
(in
App
)
LICENSE_FILENAME
(in
schrodinger.application.licensing.licadmin
)
loadCommon()
(in
ParserWrapper
)
LOGO_MAX_DIVERSITY
(in
schrodinger.application.msv.domain.annotation
)
LICENSE_FULL
(in
schrodinger.application.canvas.utils
)
loadCommon()
(in
ParserWrapper
)
logP()
(in
ComUtil
)
LICENSE_FULL_OR_MAIN
(in
schrodinger.application.canvas.utils
)
loadConstraintCoordinates()
(in
OptimizationTab
)
logParams()
(in
MECP
)
License_getFeatureName()
(in
_licensing'
)
loadConvergenceCriteriaSettings()
(in
ScfTab
)
logParams()
(in
Interface
)
license_index
(in
schrodinger.application.licensing.flexlm
)
loadConvergenceKeywords()
(in
OptimizationTab
)
logParams()
(in
Interfaces
)
license_is_dummy()
(in
schrodinger.utils.licutils
)
loadConvergenceMethodsSettings()
(in
ScfTab
)
logParams()
(in
Surfaces
)
license_is_remote()
(in
schrodinger.utils.licutils
)
loadData()
(in
FrameworkModel
)
logResult()
(in
FilterReporter
)
License_licenseExists()
(in
_licensing'
)
loadDatabases()
(in
PropFilterDialog
)
logScale
(in
DendrogramGraphicTreeCoordinatesPreferences
)
license_list()
(in
schrodinger.utils.licutils
)
loadDefaultStyle()
(in
sketcherStyle
)
logStepSize()
(in
MECPStep
)
LICENSE_MAIN
(in
schrodinger.application.canvas.utils
)
LoadDMS()
(in
schrodinger.application.desmond.packages.msys
)
logSummary()
(in
EnergyAndGradients
)
LICENSE_NAMES
(in
schrodinger.utils.license
)
loaded_mmlibs
(in
schrodinger.job.hunt_stub
)
logSummary()
(in
MECPStep
)
LICENSE_REMAINING
(in
schrodinger.application.licensing.netsuiteapi
)
loadEnumeration()
(in
ParserWrapper
)
logSummaryHeader()
(in
MECPStep
)
license_requires_server()
(in
schrodinger.utils.licutils
)
loadFile()
(in
DendrogramTreeBuilder
)
loneelectrons()
(in
AnnotatedSystem
)
LICENSE_SHARED
(in
schrodinger.application.canvas.utils
)
loadHKLOptions()
(in
ParserWrapper
)
LONEPAIR
(in
Icons
)
LICENSE_STRING
(in
schrodinger.application.licensing.netsuiteapi
)
LoadingIcon
(in
schrodinger.application.bioluminate.bwidgets
)
long_code
(in
Residue
)
License_swiginit()
(in
_licensing'
)
loadIt()
(in
ParserWrapper
)
LONG_NAME
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.base_branding_config_shell
)
License_swigregister()
(in
_licensing'
)
loadIt()
(in
ParserWrapper
)
LONG_NAME
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.branding_config_chemdb_shell
)
LICENSE_TYPE
(in
schrodinger.application.licensing.netsuiteapi
)
loadIt()
(in
ParserWrapper
)
LONG_NAME
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.branding_config_materials_shell
)
LicenseError
(in
schrodinger.application.licensing.licerror
)
loadIt()
(in
ParserWrapper
)
LONG_NAME
(in
schrodinger.application.pldb.packages.pldb_gui_shell_dir.branding_config_shell
)
LicenseException
(in
schrodinger.application.licensing.licerror
)
loadIt()
(in
ParserWrapper
)
long_range_dispersion_energy()
(in
schrodinger.application.desmond.fepana
)
licenseExists()
(in
License
)
loadIt()
(in
ParserWrapper
)
LONG_USAGE
(in
Help
)
LicenseFailure
(in
schrodinger.test.stu.outcomes.failures
)
loadIt()
(in
ParserWrapper
)
LONG_USAGE
(in
Help
)
LicenseFeature
(in
schrodinger.application.licensing.licadmin
)
loadJobs()
(in
NewJobDirFrame
)
LONGGONE
(in
_licensing'
)
LicenseLine
(in
schrodinger.application.licensing.flexlm
)
loadLocalPage()
(in
MyWebView
)
LONGGONE
(in
schrodinger.infra.licensing
)
licenseRequirements()
(in
DockingJob
)
LoadMAE()
(in
schrodinger.application.desmond.packages.msys
)
LOOP
(in
SecondaryStructure
)
licenseRequirements()
(in
GridgenJob
)
loadMaestroMode()
(in
sketcher
)
loop()
(in
ComUtil
)
licenseRequirements()
(in
StartupInterface
)
LoadMany()
(in
schrodinger.application.desmond.packages.msys
)
LoopFrame
(in
schrodinger.ui.macromodel
)
LicenseResource
(in
schrodinger.application.licensing.licadmin
)
loadMmJag()
(in
EditDialog
)
LooseOrderTupleDict
(in
schrodinger.application.desmond.fepdiff
)
licensing
(in
schrodinger.application
)
loadModels()
(in
ProteinStructureQualityViewer
)
LORENTZIAN
(in
schrodinger.application.matsci.spectra
)
licensing
(in
schrodinger.infra
)
LoadMol2()
(in
schrodinger.application.desmond.packages.msys
)
low_temp
(in
schrodinger.application.desmond.predict_remd_temp
)
licerror
(in
schrodinger.application.licensing
)
loadNewPic()
(in
_zoomViewItem
)
lower
(in
_FFIOStretchFBHW
)
LicfileError
(in
schrodinger.application.licensing.flexlm
)
loadNextTask()
(in
JobTaskRunner
)
lower_bound()
(in
StringStringMap
)
licutils
(in
schrodinger.utils
)
loadNextTask()
(in
TaskRunner
)
LQ_REQ
(in
_licensing'
)
LID_CONTOUR_GROUP_PROPERTY_NAME()
(in
sketcherScene
)
loadOptions()
(in
ParserWrapper
)
LQ_REQ
(in
schrodinger.infra.licensing
)
LIDMainToolBar()
(in
sketcher
)
loadOptions()
(in
ParserWrapper
)
lrm
(in
schrodinger.application.mcpro
)
LIG0_NAME
(in
ModelSystem
)
loadOrbitalsSettings()
(in
ScfTab
)
lst
(in
schrodinger.application.msv.gui.msv_menu
)
LIG1_NAME
(in
ModelSystem
)
LoadPDB()
(in
schrodinger.application.desmond.packages.msys
)
lst
(in
schrodinger.application.msv.msv_menu
)
LIG2_NAME
(in
ModelSystem
)
loadPerAtomSettings()
(in
BaseTab
)
LST_SEARCH_ALONG
(in
TransitionStateTab
)
lig_atom
(in
schrodinger.application.desmond.fepana
)
loadPerAtomSettings()
(in
InputTabWithSubTabs
)
LT()
(in
DebugEventListener
)
LIG_ATOM_MARKER
(in
schrodinger.application.desmond.fep_gui
)
LoadPickle()
(in
schrodinger.analysis.visanalysis.volumedataio
)
LT()
(in
DebugEventSocketProxy
)
LIG_ELEC_BLOCK
(in
schrodinger.application.desmond.fep_net_charge
)
loadPLDBMode()
(in
sketcher
)
LT()
(in
DebugTokenStream
)
LIG_FINAL_NAME
(in
ModelSystem
)
loadPoses()
(in
GlideDB
)
LT()
(in
TraceDebugEventListener
)
LIG_ONLY
(in
ModelSystem
)
LoadPrmTop()
(in
schrodinger.application.desmond.packages.msys
)
LT()
(in
ANTLRStringStream
)
LIG_RIP
(in
schrodinger.application.desmond.fep_net_charge
)
loadRequired()
(in
ParserWrapper
)
LT()
(in
CharStream
)
lig_to_fullsys_aid()
(in
schrodinger.trajectory.automatic_analysis_generator
)
loadRequired()
(in
ParserWrapper
)
LT()
(in
CommonTokenStream
)
LIGAND
(in
schrodinger.application.bioluminate.actions.icons
)
loadScheme()
(in
ColorEditor
)
LT()
(in
TokenStream
)
LIGAND
(in
PIPERConstraint
)
loadSchemeForRow()
(in
ColorEditor
)
LT()
(in
CommonTreeNodeStream
)
Ligand
(in
schrodinger.application.matsci.buildcomplex
)
LoadSDF()
(in
schrodinger.application.desmond.packages.msys
)
LT()
(in
TreeNodeStream
)
Ligand
loadSettings()
(in
BaseTab
)
LT_token()
(in
DebugEventSocketProxy
)
ligand1_atomic_mass
(in
FEPEdgeData
)
loadSettings()
(in
BaseSubTab
)
LT_tree()
(in
DebugEventSocketProxy
)
ligand1_charge
(in
FEPEdgeData
)
loadSettings()
(in
BasisSetSubTab
)
lumo()
(in
schrodinger.application.jaguar.textparser
)
ligand1_cpx_asl
(in
FEPEdgeData
)
loadSettings()
(in
ChargeConstraintsSubTab
)
lumo_prop
(in
MopacResults71
)
ligand1_cpx_sid_lighb()
(in
FEPEdgeData
)
loadSettings()
(in
InputTab
)
LYSINE
(in
schrodinger.application.msv.domain.residue
)
ligand1_cpx_sid_molsa()
(in
FEPEdgeData
)
loadSettings()
(in
InputTabBase
)
Trees
Indices
Help
2016-4 Schrodinger Python API
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